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Report for CCDS30422.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30422.1 Public Mus musculus X Morf4l2 23 108 98 CCDS HistoryNCBI Gene:56397Re-query CCDS DB by CCDS ID:30422.1Re-query CCDS DB by GeneID:56397See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30422.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033797.12 ENSMUSP00000033797.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033797.12Link to Ensembl Protein Viewer:ENSMUSP00000033797.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000033797Re-query CCDS DB by Protein ID:ENSMUSP00000033797
Original member Current member EBI ENSMUST00000113097.7 ENSMUSP00000108720.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113097.7Link to Ensembl Protein Viewer:ENSMUSP00000108720.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113097Re-query CCDS DB by Protein ID:ENSMUSP00000108720
Original member Current member EBI ENSMUST00000080411.12 ENSMUSP00000108722.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080411.12Link to Ensembl Protein Viewer:ENSMUSP00000108722.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000080411Re-query CCDS DB by Protein ID:ENSMUSP00000108722
Original member Current member EBI ENSMUST00000166930.7 ENSMUSP00000126363.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000166930.7Link to Ensembl Protein Viewer:ENSMUSP00000126363.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000166930Re-query CCDS DB by Protein ID:ENSMUSP00000126363
Original member Current member EBI ENSMUST00000164609.7 ENSMUSP00000129774.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164609.7Link to Ensembl Protein Viewer:ENSMUSP00000129774.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164609Re-query CCDS DB by Protein ID:ENSMUSP00000129774
Original member Current member EBI ENSMUST00000166478.7 ENSMUSP00000131909.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000166478.7Link to Ensembl Protein Viewer:ENSMUSP00000131909.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000166478Re-query CCDS DB by Protein ID:ENSMUSP00000131909
Original member Current member EBI ENSMUST00000169418.7 ENSMUSP00000132643.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169418.7Link to Ensembl Protein Viewer:ENSMUSP00000132643.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169418Re-query CCDS DB by Protein ID:ENSMUSP00000132643
Original member Current member NCBI NM_001168225.1 NP_001161697.1 Accepted alive Link to Nucleotide Sequence:NM_001168225.1Link to Protein Sequence:NP_001161697.1Re-query CCDS DB by Nucleotide ID:NM_001168225Re-query CCDS DB by Protein ID:NP_001161697Link to BLAST:NP_001161697.1
Original member Current member NCBI NM_001168226.1 NP_001161698.1 Accepted alive Link to Nucleotide Sequence:NM_001168226.1Link to Protein Sequence:NP_001161698.1Re-query CCDS DB by Nucleotide ID:NM_001168226Re-query CCDS DB by Protein ID:NP_001161698Link to BLAST:NP_001161698.1
Original member Current member NCBI NM_001168227.1 NP_001161699.1 Accepted alive Link to Nucleotide Sequence:NM_001168227.1Link to Protein Sequence:NP_001161699.1Re-query CCDS DB by Nucleotide ID:NM_001168227Re-query CCDS DB by Protein ID:NP_001161699Link to BLAST:NP_001161699.1
Original member Current member NCBI NM_001168228.1 NP_001161700.1 Accepted alive Link to Nucleotide Sequence:NM_001168228.1Link to Protein Sequence:NP_001161700.1Re-query CCDS DB by Nucleotide ID:NM_001168228Re-query CCDS DB by Protein ID:NP_001161700Link to BLAST:NP_001161700.1
Original member Current member NCBI NM_001168229.1 NP_001161701.1 Accepted alive Link to Nucleotide Sequence:NM_001168229.1Link to Protein Sequence:NP_001161701.1Re-query CCDS DB by Nucleotide ID:NM_001168229Re-query CCDS DB by Protein ID:NP_001161701Link to BLAST:NP_001161701.1
Original member Current member NCBI NM_001168230.1 NP_001161702.1 Accepted alive Link to Nucleotide Sequence:NM_001168230.1Link to Protein Sequence:NP_001161702.1Re-query CCDS DB by Nucleotide ID:NM_001168230Re-query CCDS DB by Protein ID:NP_001161702Link to BLAST:NP_001161702.1
Original member Current member NCBI NM_019768.4 NP_062742.4 Accepted alive Link to Nucleotide Sequence:NM_019768.4Link to Protein Sequence:NP_062742.4Re-query CCDS DB by Nucleotide ID:NM_019768Re-query CCDS DB by Protein ID:NP_062742Link to BLAST:NP_062742.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161697.1 288 Q9R0Q4 288 100% 0 0
NP_001161698.1 288 Q9R0Q4 288 100% 0 0
NP_001161699.1 288 Q9R0Q4 288 100% 0 0
NP_001161700.1 288 Q9R0Q4 288 100% 0 0
NP_001161701.1 288 Q9R0Q4 288 100% 0 0
NP_001161702.1 288 Q9R0Q4 288 100% 0 0
NP_062742.4 288 Q9R0Q4 288 100% 0 0

Chromosomal Locations for CCDS 30422.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 136733611 136734477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (867 nt):
ATGAGTTCCAGAAAGCAGGCTTCTCAAACTCGTGGACAACAATCTGCTGAAGAAGACAACTTTAAGAAAC
CAACTCGAAGCAATATGCAGAGAAGTAAGATGAGAGGAGCTGCCTCGGGAAAGAAGTCAGCTGGTTCGCA
GCCAAAGAATCTCGATCCAGCCCTGCCCGGAAGATGGGGAGGTCGCTCTGCTGAGAACCCCCCTTCCGGT
TCTGTGCGGAAGACCAGGAAGAACAAGCAGAAGGCTCCTGGCAACGGAGACGGAGGCAGTACCAGTGAAG
TCCCCCAGCCCCCTCGGAAGAAAAGGGCACGGGCTGACCCCACTGTGGAGAGCGAGGAGGCATTCAAGAG
TAGGATGGAGGTGAAGGTGAAGATCCCTGAAGAATTAAAACCGTGGCTGGTGGAGGACTGGGACTTGGTT
ACGAGGCAGAAGCAGTTGTTCCAGCTCCCTGCTAAAAAGAATGTCGATGCCATTCTTGAGGAGTATGCCA
ATTGTAAGAAGTCGCAGGGAAATGTTGATAATAAGGAGTACGCAGTTAATGAAGTTGTAGGAGGGATAAA
AGAGTATTTCAATGTGATGCTGGGCACTCAGCTGCTGTACAAGTTTGAAAGGCCTCAGTATGCTGAGATT
CTGCTGGCTCACCCTGATGCGCCGATGTCGCAGATCTATGGGGCGCCACACCTCCTGAGATTATTCGTGA
GAATTGGGGCAATGTTGGCCTATACGCCCCTTGATGAGAAAAGCCTGGCATTATTGCTGGGCTATCTGCA
TGATTTCCTTAAGTATCTGGCAAAGAATTCTGCCTCTCTGTTTACTGCCAGTGATTACAAAGTGGCTTCT
GCTGACTATCATCGCAAAGCCCTGTGA

Translation (288 aa):
MSSRKQASQTRGQQSAEEDNFKKPTRSNMQRSKMRGAASGKKSAGSQPKNLDPALPGRWGGRSAENPPSG
SVRKTRKNKQKAPGNGDGGSTSEVPQPPRKKRARADPTVESEEAFKSRMEVKVKIPEELKPWLVEDWDLV
TRQKQLFQLPAKKNVDAILEEYANCKKSQGNVDNKEYAVNEVVGGIKEYFNVMLGTQLLYKFERPQYAEI
LLAHPDAPMSQIYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNSASLFTASDYKVAS
ADYHRKAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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