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Report for CCDS30497.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30497.1 Public Mus musculus X Phex 23 108 98 CCDS HistoryNCBI Gene:18675Re-query CCDS DB by CCDS ID:30497.1Re-query CCDS DB by GeneID:18675See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 30497.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000079945.10 ENSMUSP00000078863.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000079945.10Link to Ensembl Protein Viewer:ENSMUSP00000078863.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000079945Re-query CCDS DB by Protein ID:ENSMUSP00000078863
Original member Current member NCBI NM_011077.2 NP_035207.1 Accepted alive Link to Nucleotide Sequence:NM_011077.2Link to Protein Sequence:NP_035207.1Re-query CCDS DB by Nucleotide ID:NM_011077Re-query CCDS DB by Protein ID:NP_035207Link to BLAST:NP_035207.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035207.1 749 P70669 749 100% 0 0

Chromosomal Locations for CCDS 30497.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 157165560 157165662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157174246 157174322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157177477 157177581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157178729 157178794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157183802 157183932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157186209 157186276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157193805 157193859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157220405 157220463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157238353 157238456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157268417 157268494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157310869 157310970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157338129 157338257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157342010 157342103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157350420 157350565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157351760 157351843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157355485 157355601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157364281 157364349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157370513 157370739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157372465 157372551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157403367 157403528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157409937 157410005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 157414639 157414756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2250 nt):
ATGGAAGCAGAAACAGGGAGCACCATGGAGACTGGAAAGGGGACCAACCGAGGCATTCGGATTGCACTGG
CCCTGTTTATTGGTGGCACCCTGGTGTTGGGCACACTGCTCTTTCTAGTGAGTCAAGGTCTCCTAAGTTT
CCAAGCTAAACAGGAGTACTGTCTGAAGCCAGAATGCATAGAAGCCGCTGCTGCCATCATGAGCAAAGTA
AATCTTTCTGTGGATCCTTGTGAGAATTTTTTCCGGTTTGCTTGTGATGGCTGGATAAGCAATAACCCAA
TTCCTGAAGATATGCCAAGCTATGGGGTTTATCCTTGGCTGAGACACAATGTTGACCTCAAGTTGAAGGC
ACTTCTGGAGAAATCAGTCAGCCGAAGGCGGGACACTGAAGCCGTACAGAAAGCCAAAATCCTCTACTCA
TCCTGCATGAATGAGAAAGCAATTGAAAAAGCAGATGCCAAGCCACTGCTCCACATCTTGAGGCATTCAC
CTTTCCGCTGGCCAGTGCTTGAAGCTAATATTGGTCCTGAAGGGGTTTGGTCAGAGAGAAAATTCAGTCT
ACTGCAAACACTGGCAACGTTCCGCGGTCAATACAGCAATTCTGTGTTCATCCGTTTGTATGTGTCCCCT
GATGACAAGGCATCCAATGAACATATCTTGAAGCTGGACCAAGCAACACTCTCTCTGGCTGTAAGGGAAG
ACTTCCTGGATAACACTACTGAAGCCAAATCTTATCGGGATGCCCTTTACAAATTCATGGTGGACACTGC
TGTGCTTTTAGGAGCTAATAGCTCTCGAGCTGAACATGACATGAAGTCGGTGCTTAGACTGGAAATTAAG
ATAGCTGAGATAATGATTCCACATGAGAACCGAACCAGTGAGGCTATGTATAACAAAATGAACATCTCAG
AACTCAGCGCTATGATTCCCCAGTTTGACTGGCTGGGCTATATCAAGAAGGTCATTGATACCAGACTCTA
CCCACACTTGAAAGACATTGGTCCCTCGGAGAATGTGGTGGTCCGCGTCCCACAGTACTTTAAAGATTTG
TTTAGGATATTAGGTGCCGAGAGGAAGAAAACCATTGCCAATTATTTAGTGTGGAGAATGGTTTATTCCA
GAATTCCAAACCTCAGCAGGCGCTTTCAATATAGATGGCTAGAATTCTCAAGGGTAATCCAGGGGACCAC
AACTCTGCTGCCTCAGTGGGACAAATGTGTCAACTTTATTGAGAGTGCACTCCCATATGTTGTGGGGAAA
ATGTTTGTGAATGTTCACTTCCAGGAGGATAAGAAGGAAATGATGGAAGAATTGATTGAGGGTGTTCGCT
GGGCCTTCATTGACATGCTGGAGAAAGAAAATGAATGGATGGATGCAGGGACAAAAAGGAAAGCTCAAGA
AAAGGCAAGAGCTGTTTTGGCAAAAGTTGGCTATCCAGAGTTTATAATGAATGATACTTATGTTAATGAA
GACCTCAAGGCAATCAAATTTTCAGAATCGGACTACTTTGGCAACGTACTGCAAACCCGCAAGTATTTAG
CACAGTCTGATTTCTTCTGGCTAAGAAAAGCTGTTCCCAAAACAGAGTGGTTTACAAACCCAACAACAGT
CAATGCCTTTTACAGTGCATCTACCAACCAGATACGATTTCCTGCTGGAGAGCTGCAGAAGCCTTTCTTT
TGGGGAACAGAATACCCTCGATCCCTGAGTTATGGTGCTATAGGAGTAATTGTGGGCCATGAATTTACAC
ATGGATTTGATAATAATGGTAGAAAATATGATAAAAATGGAAACCTTGATCCGTGGTGGTCTGTGGAATC
AGAAGAAAAGTTTAAGGAAAAAACAAAATGCATGATTAACCAGTATAGCAACTATTATTGGAAGAAAGCC
GGCTTAAATGTGAAAGGGAAGAGGACCCTGGGAGAAAATATTGCTGATAATGGGGGTCTGCGAGAAGCTT
TTAGGGCTTACAGGAAATGGATAAATGATAGAAGACAGGGAGTTGAAGAGCCCCTCCTACCAGGCATCAC
ATTCACCAACAATCAGCTCTTCTTCCTGAGTTATGCTCATGTAAGGTGCAATTCCTATAGACCAGAAGCT
GCCAGAGAACAAGTGCAAATTGGTGCTCACAGTCCTCCACAATTTAGGGTCAATGGTGCCATTAGCAACT
TTGAAGAATTTCAGAAAGCTTTTAACTGTCCACGAAATTCCACTATGAACAGAGGTGCAGATTCCTGCCG
ACTCTGGTAG

Translation (749 aa):
MEAETGSTMETGKGTNRGIRIALALFIGGTLVLGTLLFLVSQGLLSFQAKQEYCLKPECIEAAAAIMSKV
NLSVDPCENFFRFACDGWISNNPIPEDMPSYGVYPWLRHNVDLKLKALLEKSVSRRRDTEAVQKAKILYS
SCMNEKAIEKADAKPLLHILRHSPFRWPVLEANIGPEGVWSERKFSLLQTLATFRGQYSNSVFIRLYVSP
DDKASNEHILKLDQATLSLAVREDFLDNTTEAKSYRDALYKFMVDTAVLLGANSSRAEHDMKSVLRLEIK
IAEIMIPHENRTSEAMYNKMNISELSAMIPQFDWLGYIKKVIDTRLYPHLKDIGPSENVVVRVPQYFKDL
FRILGAERKKTIANYLVWRMVYSRIPNLSRRFQYRWLEFSRVIQGTTTLLPQWDKCVNFIESALPYVVGK
MFVNVHFQEDKKEMMEELIEGVRWAFIDMLEKENEWMDAGTKRKAQEKARAVLAKVGYPEFIMNDTYVNE
DLKAIKFSESDYFGNVLQTRKYLAQSDFFWLRKAVPKTEWFTNPTTVNAFYSASTNQIRFPAGELQKPFF
WGTEYPRSLSYGAIGVIVGHEFTHGFDNNGRKYDKNGNLDPWWSVESEEKFKEKTKCMINQYSNYYWKKA
GLNVKGKRTLGENIADNGGLREAFRAYRKWINDRRQGVEEPLLPGITFTNNQLFFLSYAHVRCNSYRPEA
AREQVQIGAHSPPQFRVNGAISNFEEFQKAFNCPRNSTMNRGADSCRLW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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