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Report for CCDS30879.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30879.1 Public Homo sapiens 1 ADAR 24 110 108 CCDS HistoryNCBI Gene:103Re-query CCDS DB by CCDS ID:30879.1Re-query CCDS DB by GeneID:103See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30879.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368471.8 ENSP00000357456.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368471.8Link to Ensembl Protein Viewer:ENSP00000357456.3Re-query CCDS DB by Nucleotide ID:ENST00000368471Re-query CCDS DB by Protein ID:ENSP00000357456
Original member Current member EBI ENST00000649022.2 ENSP00000496896.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649022.2Link to Ensembl Protein Viewer:ENSP00000496896.2Re-query CCDS DB by Nucleotide ID:ENST00000649022Re-query CCDS DB by Protein ID:ENSP00000496896
Original member Current member EBI ENST00000649749.1 ENSP00000497210.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649749.1Link to Ensembl Protein Viewer:ENSP00000497210.1Re-query CCDS DB by Nucleotide ID:ENST00000649749Re-query CCDS DB by Protein ID:ENSP00000497210
Original member Current member EBI ENST00000648231.2 ENSP00000497555.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648231.2Link to Ensembl Protein Viewer:ENSP00000497555.1Re-query CCDS DB by Nucleotide ID:ENST00000648231Re-query CCDS DB by Protein ID:ENSP00000497555
Original member Current member EBI ENST00000649042.1 ENSP00000497790.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649042.1Link to Ensembl Protein Viewer:ENSP00000497790.1Re-query CCDS DB by Nucleotide ID:ENST00000649042Re-query CCDS DB by Protein ID:ENSP00000497790
Original member Current member EBI ENST00000649724.1 ENSP00000497932.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649724.1Link to Ensembl Protein Viewer:ENSP00000497932.1Re-query CCDS DB by Nucleotide ID:ENST00000649724Re-query CCDS DB by Protein ID:ENSP00000497932
Original member Current member EBI ENST00000648311.1 ENSP00000498137.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648311.1Link to Ensembl Protein Viewer:ENSP00000498137.1Re-query CCDS DB by Nucleotide ID:ENST00000648311Re-query CCDS DB by Protein ID:ENSP00000498137
Original member Current member EBI ENST00000680270.1 ENSP00000505532.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680270.1Link to Ensembl Protein Viewer:ENSP00000505532.1Re-query CCDS DB by Nucleotide ID:ENST00000680270Re-query CCDS DB by Protein ID:ENSP00000505532
Original member Current member EBI ENST00000681056.1 ENSP00000506234.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681056.1Link to Ensembl Protein Viewer:ENSP00000506234.1Re-query CCDS DB by Nucleotide ID:ENST00000681056Re-query CCDS DB by Protein ID:ENSP00000506234
Original member Current member EBI ENST00000681683.1 ENSP00000506666.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681683.1Link to Ensembl Protein Viewer:ENSP00000506666.1Re-query CCDS DB by Nucleotide ID:ENST00000681683Re-query CCDS DB by Protein ID:ENSP00000506666
Original member Current member NCBI NM_001025107.3 NP_001020278.1 Accepted alive Link to Nucleotide Sequence:NM_001025107.3Link to Protein Sequence:NP_001020278.1Re-query CCDS DB by Nucleotide ID:NM_001025107Re-query CCDS DB by Protein ID:NP_001020278Link to BLAST:NP_001020278.1
Original member Current member NCBI NM_001193495.2 NP_001180424.1 Accepted alive Link to Nucleotide Sequence:NM_001193495.2Link to Protein Sequence:NP_001180424.1Re-query CCDS DB by Nucleotide ID:NM_001193495Re-query CCDS DB by Protein ID:NP_001180424Link to BLAST:NP_001180424.1
Original member Current member NCBI NM_001365046.1 NP_001351975.1 Accepted alive Link to Nucleotide Sequence:NM_001365046.1Link to Protein Sequence:NP_001351975.1Re-query CCDS DB by Nucleotide ID:NM_001365046Re-query CCDS DB by Protein ID:NP_001351975Link to BLAST:NP_001351975.1
Original member Current member NCBI NM_001365047.1 NP_001351976.1 Accepted alive Link to Nucleotide Sequence:NM_001365047.1Link to Protein Sequence:NP_001351976.1Re-query CCDS DB by Nucleotide ID:NM_001365047Re-query CCDS DB by Protein ID:NP_001351976Link to BLAST:NP_001351976.1
Original member Current member NCBI NM_001365048.1 NP_001351977.1 Accepted alive Link to Nucleotide Sequence:NM_001365048.1Link to Protein Sequence:NP_001351977.1Re-query CCDS DB by Nucleotide ID:NM_001365048Re-query CCDS DB by Protein ID:NP_001351977Link to BLAST:NP_001351977.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020278.1 931 P55265-5 931 100% 0 0
NP_001180424.1 931 P55265-5 931 100% 0 0
NP_001351975.1 931 P55265-5 931 100% 0 0
NP_001351976.1 931 P55265-5 931 100% 0 0
NP_001351977.1 931 P55265-5 931 100% 0 0

Chromosomal Locations for CCDS 30879.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 154584806 154585043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154585217 154585344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154585753 154585865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154586181 154586363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154588125 154588258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154588551 154588673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154589369 154589462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154589757 154589928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154590184 154590409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154596805 154596995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154597123 154597267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154597828 154597976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154598402 154598585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 154601041 154601756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2796 nt):
ATGGCCGAGATCAAGGAGAAAATCTGCGACTATCTCTTCAATGTGTCTGACTCCTCTGCCCTGAATTTGG
CTAAAAATATTGGCCTTACCAAGGCCCGAGATATAAATGCTGTGCTAATTGACATGGAAAGGCAGGGGGA
TGTCTATAGACAAGGGACAACCCCTCCCATATGGCATTTGACAGACAAGAAGCGAGAGAGGATGCAAATC
AAGAGAAATACGAACAGTGTTCCTGAAACCGCTCCAGCTGCAATCCCTGAGACCAAAAGAAACGCAGAGT
TCCTCACCTGTAATATACCCACATCAAATGCCTCAAATAACATGGTAACCACAGAAAAAGTGGAGAATGG
GCAGGAACCTGTCATAAAGTTAGAAAACAGGCAAGAGGCCAGACCAGAACCAGCAAGACTGAAACCACCT
GTTCATTACAATGGCCCCTCAAAAGCAGGGTATGTTGACTTTGAAAATGGCCAGTGGGCCACAGATGACA
TCCCAGATGACTTGAATAGTATCCGCGCAGCACCAGGTGAGTTTCGAGCCATCATGGAGATGCCCTCCTT
CTACAGTCATGGCTTGCCACGGTGTTCACCCTACAAGAAACTGACAGAGTGCCAGCTGAAGAACCCCATC
AGCGGGCTGTTAGAATATGCCCAGTTCGCTAGTCAAACCTGTGAGTTCAACATGATAGAGCAGAGTGGAC
CACCCCATGAACCTCGATTTAAATTCCAGGTTGTCATCAATGGCCGAGAGTTTCCCCCAGCTGAAGCTGG
AAGCAAGAAAGTGGCCAAGCAGGATGCAGCTATGAAAGCCATGACAATTCTGCTAGAGGAAGCCAAAGCC
AAGGACAGTGGAAAATCAGAAGAATCATCCCACTATTCCACAGAGAAAGAATCAGAGAAGACTGCAGAGT
CCCAGACCCCCACCCCTTCAGCCACATCCTTCTTTTCTGGGAAGAGCCCCGTCACCACACTGCTTGAGTG
TATGCACAAATTGGGGAACTCCTGCGAATTCCGTCTCCTGTCCAAAGAAGGCCCTGCCCATGAACCCAAG
TTCCAATACTGTGTTGCAGTGGGAGCCCAAACTTTCCCCAGTGTGAGTGCTCCCAGCAAGAAAGTGGCAA
AGCAGATGGCCGCAGAGGAAGCCATGAAGGCCCTGCATGGGGAGGCGACCAACTCCATGGCTTCTGATAA
CCAGCCTGAAGGTATGATCTCAGAGTCACTTGATAACTTGGAATCCATGATGCCCAACAAGGTCAGGAAG
ATTGGCGAGCTCGTGAGATACCTGAACACCAACCCTGTGGGTGGCCTTTTGGAGTACGCCCGCTCCCATG
GCTTTGCTGCTGAATTCAAGTTGGTCGACCAGTCCGGACCTCCTCACGAGCCCAAGTTCGTTTACCAAGC
AAAAGTTGGGGGTCGCTGGTTCCCAGCCGTCTGCGCACACAGCAAGAAGCAAGGCAAGCAGGAAGCAGCA
GATGCGGCTCTCCGTGTCTTGATTGGGGAGAACGAGAAGGCAGAACGCATGGGTTTCACAGAGGTAACCC
CAGTGACAGGGGCCAGTCTCAGAAGAACTATGCTCCTCCTCTCAAGGTCCCCAGAAGCACAGCCAAAGAC
ACTCCCTCTCACTGGCAGCACCTTCCATGACCAGATAGCCATGCTGAGCCACCGGTGCTTCAACACTCTG
ACTAACAGCTTCCAGCCCTCCTTGCTCGGCCGCAAGATTCTGGCCGCCATCATTATGAAAAAAGACTCTG
AGGACATGGGTGTCGTCGTCAGCTTGGGAACAGGGAATCGCTGTGTGAAAGGAGATTCTCTCAGCCTAAA
AGGAGAAACTGTCAATGACTGCCATGCAGAAATAATCTCCCGGAGAGGCTTCATCAGGTTTCTCTACAGT
GAGTTAATGAAATACAACTCCCAGACTGCGAAGGATAGTATATTTGAACCTGCTAAGGGAGGAGAAAAGC
TCCAAATAAAAAAGACTGTGTCATTCCATCTGTATATCAGCACTGCTCCGTGTGGAGATGGCGCCCTCTT
TGACAAGTCCTGCAGCGACCGTGCTATGGAAAGCACAGAATCCCGCCACTACCCTGTCTTCGAGAATCCC
AAACAAGGAAAGCTCCGCACCAAGGTGGAGAACGGAGAAGGCACAATCCCTGTGGAATCCAGTGACATTG
TGCCTACGTGGGATGGCATTCGGCTCGGGGAGAGACTCCGTACCATGTCCTGTAGTGACAAAATCCTACG
CTGGAACGTGCTGGGCCTGCAAGGGGCACTGTTGACCCACTTCCTGCAGCCCATTTATCTCAAATCTGTC
ACATTGGGTTACCTTTTCAGCCAAGGGCATCTGACCCGTGCTATTTGCTGTCGTGTGACAAGAGATGGGA
GTGCATTTGAGGATGGACTACGACATCCCTTTATTGTCAACCACCCCAAGGTTGGCAGAGTCAGCATATA
TGATTCCAAAAGGCAATCCGGGAAGACTAAGGAGACAAGCGTCAACTGGTGTCTGGCTGATGGCTATGAC
CTGGAGATCCTGGACGGTACCAGAGGCACTGTGGATGGGCCACGGAATGAATTGTCCCGGGTCTCCAAAA
AGAACATTTTTCTTCTATTTAAGAAGCTCTGCTCCTTCCGTTACCGCAGGGATCTACTGAGACTCTCCTA
TGGTGAGGCCAAGAAAGCTGCCCGTGACTACGAGACGGCCAAGAACTACTTCAAAAAAGGCCTGAAGGAT
ATGGGCTATGGGAACTGGATTAGCAAACCCCAGGAGGAAAAGAACTTTTATCTCTGCCCAGTATAG

Translation (931 aa):
MAEIKEKICDYLFNVSDSSALNLAKNIGLTKARDINAVLIDMERQGDVYRQGTTPPIWHLTDKKRERMQI
KRNTNSVPETAPAAIPETKRNAEFLTCNIPTSNASNNMVTTEKVENGQEPVIKLENRQEARPEPARLKPP
VHYNGPSKAGYVDFENGQWATDDIPDDLNSIRAAPGEFRAIMEMPSFYSHGLPRCSPYKKLTECQLKNPI
SGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDAAMKAMTILLEEAKA
KDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPK
FQYCVAVGAQTFPSVSAPSKKVAKQMAAEEAMKALHGEATNSMASDNQPEGMISESLDNLESMMPNKVRK
IGELVRYLNTNPVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAA
DAALRVLIGENEKAERMGFTEVTPVTGASLRRTMLLLSRSPEAQPKTLPLTGSTFHDQIAMLSHRCFNTL
TNSFQPSLLGRKILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYS
ELMKYNSQTAKDSIFEPAKGGEKLQIKKTVSFHLYISTAPCGDGALFDKSCSDRAMESTESRHYPVFENP
KQGKLRTKVENGEGTIPVESSDIVPTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPIYLKSV
TLGYLFSQGHLTRAICCRVTRDGSAFEDGLRHPFIVNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYD
LEILDGTRGTVDGPRNELSRVSKKNIFLLFKKLCSFRYRRDLLRLSYGEAKKAARDYETAKNYFKKGLKD
MGYGNWISKPQEEKNFYLCPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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