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Report for CCDS31018.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
31018.1 |
Public |
Homo sapiens |
1 |
LPGAT1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9926](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:31018.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9926](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 31018.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000366996.1 |
ENSP00000355963.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000366996.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000355963.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000366996](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000355963](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000366997.9 |
ENSP00000355964.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000366997.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000355964.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000366997](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000355964](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001320808.2 |
NP_001307737.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001320808.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001307737.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001320808](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001307737](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001307737.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375841.1 |
NP_001362770.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375841.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362770.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375841](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362770](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362770.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375842.1 |
NP_001362771.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375842.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362771.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375842](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362771](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362771.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_014873.3 |
NP_055688.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_014873.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_055688.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_014873](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_055688](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_055688.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 31018.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1113 nt): ATGGCTATAACTTTGGAAGAAGCTCCGTGGCTGGGCTGGCTCTTGGTGAAAGCACTGATGAGGTTTGCCT TCATGGTCGTCAACAACCTGGTTGCTATTCCATCCTACATCTGCTATGTAATTATACTTCAGCCCCTTCG AGTGCTGGACAGTAAGCGGTTCTGGTATATCGAAGGAATCATGTATAAATGGCTTTTAGGAATGGTAGCT TCCTGGGGATGGTATGCTGGATATACAGTGATGGAATGGGGAGAAGATATTAAAGCAGTTTCAAAAGATG AAGCAGTGATGTTGGTGAATCATCAGGCAACAGGAGATGTGTGCACACTGATGATGTGCCTCCAGGACAA AGGACTGGTTGTTGCTCAGATGATGTGGTTGATGGATCATATTTTTAAGTACACAAACTTTGGAATTGTT TCTCTAGTTCATGGAGACTTCTTTATAAGACAGGGAAGATCTTATCGTGACCAACAGCTGCTGCTTCTCA AGAAGCACTTAGAAAATAATTACAGGAGCAGAGATCGAAAATGGATTGTTTTGTTTCCAGAAGGGGGCTT CCTCAGGAAGAGGCGAGAAACAAGTCAGGCATTTGCCAAGAAAAATAACTTGCCATTTCTTACAAATGTT ACTCTGCCAAGGTCTGGGGCAACAAAAATTATTTTGAATGCACTTGTAGCACAACAGAAAAATGGAAGTC CAGCAGGAGGAGATGCTAAAGAATTAGACAGCAAATCAAAAGGCCTCCAGTGGATAATAGATACAACGAT AGCTTATCCCAAAGCTGAACCTATAGATATTCAAACCTGGATCCTTGGATACAGGAAACCAACAGTCACA CATGTACATTACAGGATCTTTCCAATTAAAGATGTACCCCTGGAGACTGATGACCTTACCACTTGGCTCT ATCAGCGGTTTGTTGAAAAAGAAGACCTCTTATCACATTTTTATGAAACAGGAGCTTTTCCACCTTCCAA GGGCCATAAGGAAGCTGTTTCCAGGGAGATGACCCTCAGCAACTTGTGGATATTTCTCATACAGTCTTTT GCATTTTTGTCAGGCTATATGTGGTACAACATCATTCAGTATTTTTACCATTGCCTGTTTTAG
Translation (370 aa): MAITLEEAPWLGWLLVKALMRFAFMVVNNLVAIPSYICYVIILQPLRVLDSKRFWYIEGIMYKWLLGMVA SWGWYAGYTVMEWGEDIKAVSKDEAVMLVNHQATGDVCTLMMCLQDKGLVVAQMMWLMDHIFKYTNFGIV SLVHGDFFIRQGRSYRDQQLLLLKKHLENNYRSRDRKWIVLFPEGGFLRKRRETSQAFAKKNNLPFLTNV TLPRSGATKIILNALVAQQKNGSPAGGDAKELDSKSKGLQWIIDTTIAYPKAEPIDIQTWILGYRKPTVT HVHYRIFPIKDVPLETDDLTTWLYQRFVEKEDLLSHFYETGAFPPSKGHKEAVSREMTLSNLWIFLIQSF AFLSGYMWYNIIQYFYHCLF
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