CCDS Report for Consensus CDS

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Report for CCDS31282.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
31282.1	Public	Homo sapiens	10	CFAP58	24	110	108

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31282.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000369704.8	ENSP00000358718.3	MANE Select	Accepted	alive
		NCBI	NM_001008723.2	NP_001008723.1	MANE Select	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001008723.1	872	Q5T655	872	100%	0	0

Chromosomal Locations for CCDS 31282.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)

Genome Browser links:

Chromosome	Start	Stop
10	104353898	104353906
10	104358341	104358622
10	104362023	104362171
10	104364733	104364889
10	104365814	104366008
10	104368423	104368560
10	104370895	104371054
10	104376811	104376893
10	104380029	104380220
10	104392233	104392394
10	104393329	104393475
10	104399360	104399500
10	104400680	104400903
10	104403729	104403840
10	104406689	104406793
10	104447698	104447817
10	104450071	104450204
10	104454422	104454530

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2619 nt):
ATGGCTGAGGAAAAGGGTGGAAAGCAAGTCCTGGAAGAATCTGCATTTGAAGAAATGGAAAGAGATTTTC AGGGAGTTCTCCATGAACTTTCTGGAGACAAAAGTTTGGAAAAATTTCGGATTGAATATGAGAGGCTTCA TGCTGTCATGAAAAAGTCTTATGACAATGAAAAGCGTCTGATGGCCAAATGCAGAGAGCTAAATGCAGAG ATTGTAGTGAATTCTGCGAAGGTCGCCACTGCCCTTAAGCTCTCTCAGGATGATCAGACCACCATTGCAT CCCTAAAGAAGGAAATTGAAAAGGCCTGGAAGATGGTGGACTCAGCCTATGACAAAGAGCAGAAGGCCAA GGAGACGATTCTTGCTCTGAAAGAGGAAATAGTGAACCTGACCAAACTAGTGGAGCAGGGGTCTGGACTG TCAATGGACCAGCATAGCAACATCCGAGATTTACTGAGGTTCAAAGAAGAAGTGACAAAGGAGAGAGACC AGCTCTTATCAGAAGTGGTAAAATTACGAGAATCCCTAGCTCAGACCACTGAACAGCAGCAGGAAACAGA GCGATCAAAAGAGGAGGCTGAACATGCCATCAGTCAGTTCCAACAAGAAATCCAGCAACGTCAGAACGAA GCTTCCCGGGAGTTCCGGAAGAAGGAAAAACTAGAGAAAGAGCTCAAGCAGATTCAGGCAGACATGGACA GCAGGCAGACAGAAATAAAAGCCCTGCAGCAGTATGTGCAGAAGAGCAAGGAGGAGCTTCAGAAGCTGGA GCAGCAGCTGAAGGAGCAGAAGATATTGAATGAGAGAGCTGCAAAGGAACTCGAGCAATTTCAGATGAGA AATGCTAAACTTCAGCAAGAGAATGAACAGCACAGTTTGGTCTGTGAGCAGCTATCCCAGGAAAACCAAC AGAAGGCGTTGGAGCTCAAAGCCAAAGAGGAAGAAGTCCATCAAATGCGCCTTGACATCGGGAAGCTCAA CAAAATCAGAGAACAAATTCATAAGAAATTGCACCACACCGAAGATCAAAAGGCAGAAGTCGAACAGCAC AAAGAAACCCTAAAAAATCAGATTGTGGGATTAGAGAGAGAGGTAGAGGCTTCAAAGAAACAAGCAGAAC TTGACAGAAAGGCAATGGACGAGCTTCTAAGAGAAAGGGACATACTAAATAAGAACATGCTTAAGGCGGT CAATGCGACCCAGAAGCAGACAGACTTGGTAAAGCTCCATGAACAAGCCAAGAGGAACCTGGAGGGAGAA ATCCAGAACTACAAGGATGAGGCTCAGAAGCAGAGAAAGATCATCTTTCATCTGGAAAAGGAGCGTGACC GGTACATCAACCAAGCCAGTGACCTTACGCAAAAGGTCCTTATGAACATGGAAGACATAAAAGTTCGTGA AACACAGATTTTTGACTACAGGAAAAAAATAGCTGAATCAGAGATTAAATTAAAACAGCAACAGAACCTA TATGAAGCTGTGAGATCAGACAGAAATCTGTATAGCAAAAATCTGGTTGAGGCTCAGGATGAAATAACAG ATATGAAGAGAAAGTTAAAGATTATGATCCATCAGGTAGATGAGCTGAAAGAAGACATCTCTGCCAAAGA GTCCGCACTTGTGAAGCTGCACCTGGAACAGCAGCGAATAGAAAAGGAAAAGGAAACATTGAAGGCTGAG CTGCAGAAGCTGAGACAACAAGCCCTGGAGACAAAACACTTTATTGAAAAGCAAGAAGCTGAAGAGAGAA AACTCCTGCGAATAATTGCTGAGGCTGACGGGGAGAGGTTGAGACAGAAGAAGGAATTAGACCAGGTCAT CAGTGAGAGAGATATCCTGGGGTCTCAGCTTGTTCGGCGCAATGATGAGTTAGCTTTGCTCTATGAGAAG ATCAAGATCCAACAGTCTGTGCTGAATAAAGGGGAGAGCCAGTACAACCAGAGGTTGGAGGACATGAGAA TCCTCAGACTTGAGATCAAGAAGCTTCGCCGGGAAAAGGGGATTCTTGCCAGGAGTATGGCTAATGTTGA AGAACTCAGACAGGAGTTTTTTCACATGCAAAGAGAATTGTTGAAGGAGAGGACACGCTGCCGAGCCCTG GAGGAGGAGCTGGAGAATCCCCTGAATGTGCACAGATGGAGGAAGCTCGAGGCCAGCGACCCCAATGCAT ATGAGCTGATACAGAAAATTCACACCCTGCAGAAGCGTCTCATCAGCAAGACTGAAGAGGTGGTTGAAAA AGAGCTGCTCCTCCAGGAAAAGGAGAAACTCTACATGGAACTAAAGCACGTCTTGGCCCGCCAGCCTGGA CCTGAGGCTGCGGAACAGCTGAAGCTGTACCGACGCACGCTGCATGACAAGAAGCAGCAGCTGAAAGTTT TGTCTTCAGAATTGAATATGTATGAAGTACAGAGCAAAGAATATAAATATGAGGTAGAGAAACTTACCAA TGAGCTCCAGAATTTAAAGAAGAAATACCTCGCTCAGAAACGTAAAGAACAACTTCAAAAAAACAAGGAC ACAGCACCCATGGATAACACCTTCTTAATGGTCAAACCAAATGGTCCTGGTTTTACTGGGGGCGGATTTC CTCTCAGGTCAACCAAAATGACGTTCTAA
Translation (872 aa):
MAEEKGGKQVLEESAFEEMERDFQGVLHELSGDKSLEKFRIEYERLHAVMKKSYDNEKRLMAKCRELNAE IVVNSAKVATALKLSQDDQTTIASLKKEIEKAWKMVDSAYDKEQKAKETILALKEEIVNLTKLVEQGSGL SMDQHSNIRDLLRFKEEVTKERDQLLSEVVKLRESLAQTTEQQQETERSKEEAEHAISQFQQEIQQRQNE ASREFRKKEKLEKELKQIQADMDSRQTEIKALQQYVQKSKEELQKLEQQLKEQKILNERAAKELEQFQMR NAKLQQENEQHSLVCEQLSQENQQKALELKAKEEEVHQMRLDIGKLNKIREQIHKKLHHTEDQKAEVEQH KETLKNQIVGLEREVEASKKQAELDRKAMDELLRERDILNKNMLKAVNATQKQTDLVKLHEQAKRNLEGE IQNYKDEAQKQRKIIFHLEKERDRYINQASDLTQKVLMNMEDIKVRETQIFDYRKKIAESEIKLKQQQNL YEAVRSDRNLYSKNLVEAQDEITDMKRKLKIMIHQVDELKEDISAKESALVKLHLEQQRIEKEKETLKAE LQKLRQQALETKHFIEKQEAEERKLLRIIAEADGERLRQKKELDQVISERDILGSQLVRRNDELALLYEK IKIQQSVLNKGESQYNQRLEDMRILRLEIKKLRREKGILARSMANVEELRQEFFHMQRELLKERTRCRAL EEELENPLNVHRWRKLEASDPNAYELIQKIHTLQKRLISKTEEVVEKELLLQEKEKLYMELKHVLARQPG PEAAEQLKLYRRTLHDKKQQLKVLSSELNMYEVQSKEYKYEVEKLTNELQNLKKKYLAQKRKEQLQKNKD TAPMDNTFLMVKPNGPGFTGGGFPLRSTKMTF

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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