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Report for CCDS31423.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31423.1 Public Homo sapiens 11 DENND5A 24 110 108 CCDS HistoryNCBI Gene:23258Re-query CCDS DB by CCDS ID:31423.1Re-query CCDS DB by GeneID:23258See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31423.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328194.8 ENSP00000328524.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328194.8Link to Ensembl Protein Viewer:ENSP00000328524.3Re-query CCDS DB by Nucleotide ID:ENST00000328194Re-query CCDS DB by Protein ID:ENSP00000328524
Original member Current member NCBI NM_015213.4 NP_056028.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015213.4Link to Protein Sequence:NP_056028.2Re-query CCDS DB by Nucleotide ID:NM_015213Re-query CCDS DB by Protein ID:NP_056028Link to BLAST:NP_056028.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056028.2 1287 Q6IQ26-1 1287 100% 0 0

Chromosomal Locations for CCDS 31423.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 9139671 9139854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9141940 9142108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9142722 9142845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9143403 9143485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9144097 9144278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9144995 9145113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9145670 9145815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9147030 9147151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9150081 9150209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9150680 9150764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9152358 9152442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9160713 9160865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9165836 9165967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9169856 9169949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9170627 9170777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9178132 9178366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9178858 9179073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9180767 9181084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9193494 9193681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9203660 9204317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9206673 9206782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9207561 9207632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 9264961 9265069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3864 nt):
ATGAGTGGCGGCGGCGGCGGAGGGGGCTCGGCGCCCAGTCGCTTCGCCGACTACTTTGTCATCTGCGGAC
TGGACACGGAGACCGGGCTGGAGCCGGACGAGCTGTCGGCATTATGCCAGTACATACAGGCTTCTAAAGC
CAGGGATGGTGCCAGCCCTTTCATTTCAAGTACGACTGAAGGAGAAAATTTTGAGCAGACACCATTGAGA
AGAACATTCAAATCTAAGGTCCTTGCACGATATCCTGAGAACGTAGAATGGAATCCCTTTGACCAAGATG
CAGTAGGAATGCTATGTATGCCGAAAGGGCTGGCATTCAAGACCCAGGCTGATCCCAGGGAGCCCCAATT
CCATGCCTTTATTATCACAAGGGAGGATGGCTCTCGGACATTTGGGTTTGCCCTCACATTTTATGAAGAG
GTGACTAGCAAGCAGATCTGCAGTGCAATGCAGACCCTCTACCACATGCACAATGCTGAGTATGATGTCC
TACATGCTCCCCCTGCTGATGACAGAGACCAGAGCAGCATGGAGGATGGTGAAGACACTCCTGTGACCAA
ACTGCAGCGCTTCAACTCCTATGACATTAGCCGGGACACTCTCTACGTCTCTAAGTGCATCTGCCTCATC
ACACCCATGTCTTTCATGAAGGCATGTCGGAGCGTGCTGGAGCAACTCCACCAGGCAGTCACTTCACCTC
AGCCCCCTCCACTGCCCCTTGAGAGCTACATATACAACGTACTCTACGAGGTGCCGCTCCCACCTCCTGG
CCGGTCCTTGAAGTTTTCTGGGGTCTATGGGCCAATAATCTGCCAGAGACCAAGTACCAATGAGCTTCCC
CTATTTGACTTTCCTGTCAAAGAGGTTTTTGAACTGCTCGGGGTGGAGAATGTGTTTCAGCTTTTTACTT
GTGCCCTTCTGGAGTTTCAAATCCTGCTCTACTCACAGCATTACCAGAGACTGATGACTGTGGCGGAGAC
GATTACAGCTCTCATGTTTCCTTTCCAGTGGCAGCATGTCTATGTCCCTATTCTCCCAGCTTCTCTCCTG
CATTTCTTAGATGCTCCTGTTCCATACCTGATGGGTTTGCATTCCAATGGCCTGGATGACCGGTCAAAGC
TGGAGCTGCCTCAAGAGGCTAACCTCTGCTTTGTGGACATTGACAACCACTTCATTGAGTTGCCAGAGGA
CTTGCCACAGTTCCCCAACAAATTGGAGTTTGTCCAGGAAGTCTCTGAGATTCTCATGGCATTTGGAATT
CCCCCTGAAGGGAATCTTCATTGCAGTGAGAGTGCCTCCAAGCTGAAGAGGCTGCGGGCCTCTGAGCTTG
TCTCGGACAAGAGGAATGGGAACATTGCTGGCTCCCCTTTGCATTCCTACGAGCTTCTTAAGGAGAATGA
AACTATTGCCCGGCTGCAAGCCTTGGTCAAGAGAACTGGGGTGAGCCTGGAAAAGTTGGAAGTGCGTGAA
GACCCCAGCAGCAATAAGGATCTCAAAGTTCAGTGTGATGAAGAAGAACTCAGGATTTACCAGCTAAACA
TTCAGATCCGGGAAGTTTTTGCAAATCGTTTCACTCAGATGTTTGCAGATTATGAGGTGTTTGTCATCCA
ACCCAGCCAGGATAAGGAATCCTGGTTTACCAACAGGGAGCAAATGCAAAACTTTGATAAAGCATCTTTT
CTGTCAGATCAGCCTGAGCCCTACCTGCCCTTCCTCTCAAGATTCCTGGAGACCCAGATGTTTGCATCTT
TCATTGACAACAAAATAATGTGTCATGATGATGATGATAAAGACCCTGTACTCCGGGTATTTGATTCCCG
AGTTGACAAGATCAGGCTGTTGAATGTTCGGACACCTACTCTCCGTACATCCATGTACCAGAAGTGTACC
ACTGTGGATGAAGCAGAGAAAGCAATTGAGCTGCGTCTGGCAAAAATTGACCATACTGCAATTCACCCAC
ATTTACTTGACATGAAGATTGGACAAGGGAAATATGAGCCGGGCTTCTTCCCTAAGCTGCAGTCTGATGT
ACTTTCCACTGGGCCAGCCAGCAACAAGTGGACGAAAAGGAATGCCCCTGCCCAGTGGAGGCGGAAAGAT
CGGCAGAAGCAGCACACAGAACACCTGCGTTTAGATAATGACCAGAGGGAGAAGTACATCCAGGAAGCCA
GGACTATGGGCAGCACTATCCGCCAGCCCAAACTGTCCAACCTCTCTCCATCAGTGATTGCCCAGACCAA
TTGGAAGTTTGTAGAGGGCCTGCTGAAGGAATGCCGCAATAAGACCAAGAGGATGCTGGTGGAAAAGATG
GGCCGAGAAGCTGTGGAGCTAGGGCATGGGGAGGTGAACATCACAGGGGTGGAAGAGAACACCCTGATTG
CCAGCCTTTGTGATCTCCTGGAAAGGATCTGGAGTCATGGACTACAAGTGAAACAGGGGAAATCAGCCTT
ATGGTCCCACCTGTTACATTATCAGGACAACCGGCAGAGAAAACTCACATCAGGAAGCCTCAGTACCTCA
GGAATACTTCTTGATTCAGAACGTAGGAAGTCTGATGCCAGCTCACTCATGCCTCCCCTGAGGATCTCCC
TGATTCAGGATATGAGGCACATCCAGAACATCGGGGAAATCAAGACTGATGTGGGAAAGGCCAGAGCATG
GGTGCGACTGTCCATGGAAAAAAAGTTACTTTCCAGACACCTGAAGCAGCTCCTCTCAGACCATGAGCTC
ACCAAAAAGTTATATAAGCGCTATGCCTTCCTGCGCTGTGATGACGAGAAGGAGCAGTTCCTCTATCACC
TCCTGTCTTTCAATGCCGTCGATTACTTTTGCTTCACCAATGTCTTCACAACTATCCTGATCCCGTACCA
CATTCTGATCGTACCAAGCAAGAAGCTGGGGGGCTCCATGTTCACTGCCAACCCATGGATCTGTATATCA
GGAGAATTGGGTGAGACACAGATCATGCAGATTCCCAGGAATGTGCTAGAGATGACCTTCGAGTGCCAGA
ACTTGGGGAAGCTTACTACTGTCCAGATTGGCCATGATAACTCTGGGCTGTATGCCAAATGGCTGGTGGA
GTATGTGATGGTCAGGAATGAGATCACAGGACATACCTACAAGTTCCCGTGTGGCCGGTGGTTAGGGAAG
GGCATGGATGATGGAAGCCTGGAGCGGATCCTAGTTGGGGAGCTGCTCACATCCCAGCCTGAGGTGGATG
AGAGGCCATGCCGGACCCCGCCGCTGCAGCAGTCCCCCAGTGTCATCCGGAGGCTTGTTACCATCTCACC
CAACAACAAGCCCAAGCTGAACACTGGGCAGATCCAGGAGTCCATCGGGGAGGCAGTCAATGGCATTGTG
AAGCACTTCCATAAGCCTGAGAAAGAGCGAGGCAGTCTGACGCTGTTGCTCTGTGGAGAGTGTGGCCTTG
TCTCGGCCTTGGAACAGGCTTTCCAGCATGGATTTAAATCGCCCCGGCTCTTCAAAAATGTCTTCATTTG
GGATTTCCTGGAAAAAGCACAAACCTATTATGAGACATTAGAGAAGAATGAAGTAGTCCCTGAGGAAAAC
TGGCATACAAGAGCCCGGAACTTCTGCCGATTTGTCACTGCAATCAACAATACTCCCCGGAACATCGGCA
AGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGAGCCAGAGATCACCTCCTACACCACTGGATTGCCCT
GCTGGCTGACTGCCCCATCACTGCACACATGTATGAGGATGTGGCACTGATCAAAGACCATACACTTGTC
AATTCCTTGATTCGTGTGCTGCAGACATTGCAGGAGTTCAACATCACGCTGGAGACGTCCCTTGTCAAGG
GCATCGACATCTGA

Translation (1287 aa):
MSGGGGGGGSAPSRFADYFVICGLDTETGLEPDELSALCQYIQASKARDGASPFISSTTEGENFEQTPLR
RTFKSKVLARYPENVEWNPFDQDAVGMLCMPKGLAFKTQADPREPQFHAFIITREDGSRTFGFALTFYEE
VTSKQICSAMQTLYHMHNAEYDVLHAPPADDRDQSSMEDGEDTPVTKLQRFNSYDISRDTLYVSKCICLI
TPMSFMKACRSVLEQLHQAVTSPQPPPLPLESYIYNVLYEVPLPPPGRSLKFSGVYGPIICQRPSTNELP
LFDFPVKEVFELLGVENVFQLFTCALLEFQILLYSQHYQRLMTVAETITALMFPFQWQHVYVPILPASLL
HFLDAPVPYLMGLHSNGLDDRSKLELPQEANLCFVDIDNHFIELPEDLPQFPNKLEFVQEVSEILMAFGI
PPEGNLHCSESASKLKRLRASELVSDKRNGNIAGSPLHSYELLKENETIARLQALVKRTGVSLEKLEVRE
DPSSNKDLKVQCDEEELRIYQLNIQIREVFANRFTQMFADYEVFVIQPSQDKESWFTNREQMQNFDKASF
LSDQPEPYLPFLSRFLETQMFASFIDNKIMCHDDDDKDPVLRVFDSRVDKIRLLNVRTPTLRTSMYQKCT
TVDEAEKAIELRLAKIDHTAIHPHLLDMKIGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRRKD
RQKQHTEHLRLDNDQREKYIQEARTMGSTIRQPKLSNLSPSVIAQTNWKFVEGLLKECRNKTKRMLVEKM
GREAVELGHGEVNITGVEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLLHYQDNRQRKLTSGSLSTS
GILLDSERRKSDASSLMPPLRISLIQDMRHIQNIGEIKTDVGKARAWVRLSMEKKLLSRHLKQLLSDHEL
TKKLYKRYAFLRCDDEKEQFLYHLLSFNAVDYFCFTNVFTTILIPYHILIVPSKKLGGSMFTANPWICIS
GELGETQIMQIPRNVLEMTFECQNLGKLTTVQIGHDNSGLYAKWLVEYVMVRNEITGHTYKFPCGRWLGK
GMDDGSLERILVGELLTSQPEVDERPCRTPPLQQSPSVIRRLVTISPNNKPKLNTGQIQESIGEAVNGIV
KHFHKPEKERGSLTLLLCGECGLVSALEQAFQHGFKSPRLFKNVFIWDFLEKAQTYYETLEKNEVVPEEN
WHTRARNFCRFVTAINNTPRNIGKDGKFQMLVCLGARDHLLHHWIALLADCPITAHMYEDVALIKDHTLV
NSLIRVLQTLQEFNITLETSLVKGIDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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