NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31716.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31716.1 Public Homo sapiens 11 FEZ1 24 110 108 CCDS HistoryNCBI Gene:9638Re-query CCDS DB by CCDS ID:31716.1Re-query CCDS DB by GeneID:9638See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31716.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278919.8 ENSP00000278919.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000278919.8Link to Ensembl Protein Viewer:ENSP00000278919.3Re-query CCDS DB by Nucleotide ID:ENST00000278919Re-query CCDS DB by Protein ID:ENSP00000278919
Original member Current member EBI ENST00000648911.1 ENSP00000497070.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648911.1Link to Ensembl Protein Viewer:ENSP00000497070.1Re-query CCDS DB by Nucleotide ID:ENST00000648911Re-query CCDS DB by Protein ID:ENSP00000497070
Original member Current member NCBI NM_005103.5 NP_005094.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005103.5Link to Protein Sequence:NP_005094.1Re-query CCDS DB by Nucleotide ID:NM_005103Re-query CCDS DB by Protein ID:NP_005094Link to BLAST:NP_005094.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005094.1 392 Q99689-1 392 100% 0 0

Chromosomal Locations for CCDS 31716.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 125446095 125446111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125448502 125448567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125452334 125452409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125454130 125454210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125455835 125456106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125460498 125460666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125463484 125463570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125481534 125481633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125489467 125489777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1179 nt):
ATGGAGGCCCCACTGGTGAGTCTGGATGAAGAGTTTGAGGACCTTCGACCCTCCTGCTCGGAGGACCCGG
AGGAGAAGCCCCAGTGTTTCTATGGTTCATCTCCCCACCATCTCGAGGACCCCTCCCTCTCCGAGCTTGA
GAATTTTTCTTCCGAAATAATCAGCTTCAAGTCCATGGAGGACCTCGTAAATGAATTTGATGAGAAGCTC
AATGTCTGCTTTCGGAACTACAACGCCAAGACCGAGAACCTAGCTCCCGTGAAGAACCAGTTACAGATCC
AAGAGGAGGAGGAGACCCTTCAGGACGAGGAGGTTTGGGATGCTCTGACAGACAATTACATCCCTTCACT
CTCAGAAGACTGGAGGGATCCAAACATCGAGGCTCTGAATGGCAACTGCTCTGACACTGAGATCCATGAG
AAAGAAGAGGAAGAGTTCAATGAGAAGAGTGAAAATGATTCCGGTATCAACGAGGAGCCTCTGCTCACAG
CAGATCAGGTAATTGAGGAGATTGAGGAAATGATGCAGAACTCCCCAGACCCTGAGGAAGAAGAGGAGGT
TCTGGAAGAAGAGGATGGAGGAGAAACTTCCTCCCAGGCAGACTCGGTCCTCCTGCAGGAGATGCAGGCA
TTGACACAGACCTTCAACAACAACTGGTCCTATGAAGGGCTGAGGCACATGTCTGGGTCTGAGCTGACCG
AGCTGCTGGACCAGGTGGAGGGTGCCATCCGTGACTTCTCGGAGGAGCTGGTGCAGCAGCTGGCCCGCCG
GGACGAGCTGGAGTTTGAGAAGGAAGTGAAGAACTCCTTTATCACGGTGCTTATTGAGGTTCAGAACAAG
CAGAAGGAGCAGCGAGAACTGATGAAAAAGAGGCGGAAAGAGAAAGGGCTGAGCCTGCAGAGCAGCCGGA
TAGAGAAGGGAAACCAGATGCCTCTCAAGCGCTTCAGCATGGAAGGCATCTCCAACATTCTGCAGAGTGG
CATCCGCCAGACCTTTGGCTCCTCAGGAACTGACAAACAGTATCTGAACACAGTCATTCCTTACGAGAAG
AAAGCCTCTCCTCCCTCAGTGGAAGACCTGCAGATGCTGACAAACATTCTCTTTGCCATGAAGGAGGATA
ATGAGAAGGTGCCTACTTTGCTAACGGACTACATTTTAAAAGTGCTCTGCCCTACCTAA

Translation (392 aa):
MEAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENFSSEIISFKSMEDLVNEFDEKL
NVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPNIEALNGNCSDTEIHE
KEEEEFNEKSENDSGINEEPLLTADQVIEEIEEMMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQA
LTQTFNNNWSYEGLRHMSGSELTELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNK
QKEQRELMKKRRKEKGLSLQSSRIEKGNQMPLKRFSMEGISNILQSGIRQTFGSSGTDKQYLNTVIPYEK
KASPPSVEDLQMLTNILFAMKEDNEKVPTLLTDYILKVLCPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH