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Report for CCDS31755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31755.1 Public Homo sapiens 12 PYROXD1 24 110 108 CCDS HistoryNCBI Gene:79912Re-query CCDS DB by CCDS ID:31755.1Re-query CCDS DB by GeneID:79912See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31755.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000240651.14 ENSP00000240651.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000240651.14Link to Ensembl Protein Viewer:ENSP00000240651.9Re-query CCDS DB by Nucleotide ID:ENST00000240651Re-query CCDS DB by Protein ID:ENSP00000240651
Original member Current member NCBI NM_024854.5 NP_079130.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024854.5Link to Protein Sequence:NP_079130.2Re-query CCDS DB by Nucleotide ID:NM_024854Re-query CCDS DB by Protein ID:NP_079130Link to BLAST:NP_079130.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079130.2 500 Q8WU10-1 500 100% 0 0

Chromosomal Locations for CCDS 31755.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 21437731 21437814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21440368 21440448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21445347 21445466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21449563 21449691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21452081 21452154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21455132 21455292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21455995 21456095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21461025 21461154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21462008 21462120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21462740 21462862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21467481 21467618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21468506 21468754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1503 nt):
ATGGAGGCAGCGCGCCCTCCCCCGACGGCAGGGAAGTTCGTGGTGGTCGGCGGCGGCATCGCGGGCGTCA
CTTGTGCGGAGCAGTTGGCTACTCACTTTCCATCGGAAGATATTCTCTTGGTAACAGCTTCTCCTGTTAT
TAAAGCAGTTACAAATTTCAAGCAGATTTCTAAAATATTGGAAGAATTCGATGTTGAAGAACAATCAAGT
ACCATGTTAGGAAAACGCTTTCCCAACATTAAGGTTATAGAATCTGGCGTAAAGCAACTGAAGAGTGAAG
AACACTGCATTGTAACAGAAGATGGCAATCAGCACGTATATAAGAAACTCTGTCTGTGTGCTGGAGCTAA
ACCAAAGTTGATATGTGAAGGAAATCCTTATGTATTAGGAATCCGTGATACAGACAGTGCTCAGGAATTT
CAGAAACAGCTTACTAAAGCTAAAAGAATAATGATCATAGGGAACGGTGGTATTGCACTTGAGTTAGTGT
ATGAAATTGAAGGCTGTGAAGTGATTTGGGCCATTAAAGATAAAGCTATAGGGAATACTTTCTTCGATGC
AGGAGCAGCTGAATTCTTGACTTCAAAGCTCATTGCTGAAAAATCAGAGGCTAAAATTGCACATAAAAGA
ACCAGATATACAACTGAAGGAAGGAAAAAGGAAGCTAGAAGCAAATCTAAAGCAGATAATGTAGGAAGTG
CATTGGGACCAGATTGGCATGAAGGCTTGAATCTTAAAGGAACAAAAGAGTTTTCTCATAAGATTCACCT
TGAAACTATGTGTGAAGTAAAGAAAATCTACCTTCAGGATGAGTTTAGAATTTTGAAGAAAAAGTCCTTC
ACTTTTCCAAGAGACCATAAGTCAGTTACAGCTGATACAGAGATGTGGCCTGTCTATGTGGAATTGACCA
ATGAAAAGATATATGGCTGCGATTTCATTGTCAGTGCTACAGGAGTTACACCAAATGTAGAACCTTTTCT
CCATGGTAACAGTTTTGATCTAGGAGAAGATGGTGGCCTGAAAGTGGATGATCATATGCACACATCCCTT
CCTGATATCTATGCTGCCGGTGACATCTGTACTACATCCTGGCAGCTGAGCCCAGTCTGGCAGCAGATGA
GGCTGTGGACCCAGGCTAGACAGATGGGATGGTATGCAGCAAAGTGCATGGCTGCAGCGAGTTCAGGAGA
CTCTATTGACATGGATTTCAGCTTTGAACTGTTTGCTCATGTGACAAAATTTTTTAACTATAAGGTTGTA
CTGCTGGGAAAATACAATGCACAGGGCTTAGGTTCAGATCATGAATTAATGCTGAGATGTACCAAAGGAC
GAGAATACATCAAAGTCGTCATGCAAAATGGACGAATGATGGGAGCTGTCTTAATTGGTGAAACCGATTT
AGAAGAAACATTTGAAAACCTAATCTTAAACCAAATGAATCTTTCATCATATGGAGAAGATCTGCTAGAT
CCAAATATTGATATAGAAGATTATTTTGACTAA

Translation (500 aa):
MEAARPPPTAGKFVVVGGGIAGVTCAEQLATHFPSEDILLVTASPVIKAVTNFKQISKILEEFDVEEQSS
TMLGKRFPNIKVIESGVKQLKSEEHCIVTEDGNQHVYKKLCLCAGAKPKLICEGNPYVLGIRDTDSAQEF
QKQLTKAKRIMIIGNGGIALELVYEIEGCEVIWAIKDKAIGNTFFDAGAAEFLTSKLIAEKSEAKIAHKR
TRYTTEGRKKEARSKSKADNVGSALGPDWHEGLNLKGTKEFSHKIHLETMCEVKKIYLQDEFRILKKKSF
TFPRDHKSVTADTEMWPVYVELTNEKIYGCDFIVSATGVTPNVEPFLHGNSFDLGEDGGLKVDDHMHTSL
PDIYAAGDICTTSWQLSPVWQQMRLWTQARQMGWYAAKCMAAASSGDSIDMDFSFELFAHVTKFFNYKVV
LLGKYNAQGLGSDHELMLRCTKGREYIKVVMQNGRMMGAVLIGETDLEETFENLILNQMNLSSYGEDLLD
PNIDIEDYFD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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