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Report for CCDS32043.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32043.1 Public Homo sapiens 14 TOX4 24 110 108 CCDS HistoryNCBI Gene:9878Re-query CCDS DB by CCDS ID:32043.1Re-query CCDS DB by GeneID:9878See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32043.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000448790.7 ENSP00000393080.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000448790.7Link to Ensembl Protein Viewer:ENSP00000393080.3Re-query CCDS DB by Nucleotide ID:ENST00000448790Re-query CCDS DB by Protein ID:ENSP00000393080
Original member Current member EBI ENST00000613569.4 ENSP00000477868.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613569.4Link to Ensembl Protein Viewer:ENSP00000477868.1Re-query CCDS DB by Nucleotide ID:ENST00000613569Re-query CCDS DB by Protein ID:ENSP00000477868
Original member Current member NCBI NM_014828.4 NP_055643.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014828.4Link to Protein Sequence:NP_055643.1Re-query CCDS DB by Nucleotide ID:NM_014828Re-query CCDS DB by Protein ID:NP_055643Link to BLAST:NP_055643.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055643.1 621 O94842-1 621 100% 0 0

Chromosomal Locations for CCDS 32043.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21477279 21477284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21477496 21477564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21487451 21487693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21488590 21488850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21489173 21489403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21492296 21492376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21492508 21493257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21495229 21495392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21496546 21496606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1866 nt):
ATGGAGTTTCCCGGAGGAAATGACAATTACCTGACGATCACAGGGCCTTCGCACCCCTTCCTGTCAGGGG
CCGAGACATTCCATACACCAAGCTTGGGTGATGAGGAATTTGAAATCCCACCTATCTCCTTGGATTCTGA
TCCCTCATTGGCTGTCTCAGATGTGGTTGGCCACTTTGATGACCTGGCAGACCCTTCCTCTTCACAGGAT
GGCAGTTTTTCAGCCCAGTATGGGGTCCAGACATTGGACATGCCTGTGGGCATGACCCATGGCTTGATGG
AGCAGGGCGGGGGGCTCCTGAGTGGGGGCTTGACCATGGACTTGGACCACTCTATAGGAACTCAGTATAG
TGCCAACCCACCTGTTACAATTGATGTACCAATGACAGACATGACATCTGGCTTGATGGGGCATAGCCAG
TTGACCACCATTGATCAGTCAGAACTGAGTTCCCAGCTGGGTTTGAGCCTAGGGGGTGGCACCATCCTGC
CACCTGCCCAGTCACCTGAAGATCGTCTTTCAACCACCCCTTCACCTACTAGTTCACTTCACGAGGATGG
TGTTGAGGATTTCCGGAGGCAACTTCCCAGCCAGAAGACAGTCGTGGTGGAAGCAGGGAAAAAGCAGAAG
GCCCCAAAGAAGAGAAAAAAGAAAGATCCTAATGAACCTCAGAAACCAGTTTCAGCATATGCTTTATTCT
TTCGTGATACACAGGCTGCCATCAAGGGACAGAATCCTAATGCCACTTTTGGTGAGGTTTCAAAAATTGT
GGCCTCCATGTGGGATAGTCTTGGAGAGGAGCAAAAACAGGTATATAAGAGGAAAACTGAGGCTGCCAAG
AAAGAGTATCTGAAGGCACTGGCTGCTTACAAAGACAACCAGGAGTGTCAGGCCACTGTGGAAACAGTGG
AATTGGATCCAGCACCACCATCACAAACTCCTTCTCCACCTCCTATGGCTACTGTTGACCCAGCATCTCC
AGCACCAGCTTCAATAGAGCCCCCTGCCCTGTCCCCATCCATTGTTGTTAACTCCACCCTTTCATCCTAT
GTGGCAAACCAGGCATCTTCTGGAGCTGGGGGTCAGCCCAATATCACCAAGTTGATTATTACCAAACAAA
TGTTGCCCTCTTCTATTACTATGTCTCAAGGAGGGATGGTTACTGTTATCCCAGCCACAGTGGTGACCTC
CCGGGGGCTCCAACTAGGCCAAACCAGTACAGCTACTATCCAGCCCAGTCAACAAGCCCAGATTGTCACT
CGGTCAGTGTTGCAGGCAGCAGCAGCTGCTGCTGCTGCTGCTTCTATGCAACTGCCTCCACCCCGACTAC
AGCCCCCTCCATTACAACAGATGCCACAGCCCCCGACTCAGCAGCAAGTTACCATTCTGCAGCAGCCTCC
TCCACTCCAGGCCATGCAACAGCCTCCACCTCAGAAAGTTCGAATCAATTTACAGCAACAGCCTCCTCCT
CTGCAGATCAAGAGTGTGCCTCTACCCACTTTGAAAATGCAGACTACCTTAGTCCCACCAACTGTGGAAA
GTAGTCCTGAGCGGCCTATGAACAACAGCCCTGAGGCCCATACAGTGGAGGCACCTTCTCCTGAGACTAT
CTGTGAGATGATCACAGATGTAGTTCCTGAGGTTGAGTCTCCTTCTCAGATGGATGTTGAATTGGTGAGT
GGGTCTCCTGTGGCACTCTCACCCCAGCCTCGATGTGTGAGGTCTGGTTGTGAGAACCCTCCCATTGTGA
GTAAGGACTGGGACAATGAATACTGCAGCAATGAGTGTGTGGTGAAGCACTGCAGGGATGTATTCTTGGC
CTGGGTAGCCTCTAGAAATTCAAACACAGTGGTGTTTGTGAAATAG

Translation (621 aa):
MEFPGGNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISLDSDPSLAVSDVVGHFDDLADPSSSQD
GSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSGGLTMDLDHSIGTQYSANPPVTIDVPMTDMTSGLMGHSQ
LTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPTSSLHEDGVEDFRRQLPSQKTVVVEAGKKQK
APKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAK
KEYLKALAAYKDNQECQATVETVELDPAPPSQTPSPPPMATVDPASPAPASIEPPALSPSIVVNSTLSSY
VANQASSGAGGQPNITKLIITKQMLPSSITMSQGGMVTVIPATVVTSRGLQLGQTSTATIQPSQQAQIVT
RSVLQAAAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPPQKVRINLQQQPPP
LQIKSVPLPTLKMQTTLVPPTVESSPERPMNNSPEAHTVEAPSPETICEMITDVVPEVESPSQMDVELVS
GSPVALSPQPRCVRSGCENPPIVSKDWDNEYCSNECVVKHCRDVFLAWVASRNSNTVVFVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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