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Report for CCDS32086.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32086.1 Public Homo sapiens 14 FBXO34 24 110 108 CCDS HistoryNCBI Gene:55030Re-query CCDS DB by CCDS ID:32086.1Re-query CCDS DB by GeneID:55030See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32086.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313833.5 ENSP00000313159.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313833.5Link to Ensembl Protein Viewer:ENSP00000313159.4Re-query CCDS DB by Nucleotide ID:ENST00000313833Re-query CCDS DB by Protein ID:ENSP00000313159
Original member Current member EBI ENST00000440021.1 ENSP00000394117.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440021.1Link to Ensembl Protein Viewer:ENSP00000394117.1Re-query CCDS DB by Nucleotide ID:ENST00000440021Re-query CCDS DB by Protein ID:ENSP00000394117
Original member Current member EBI ENST00000680682.1 ENSP00000504946.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680682.1Link to Ensembl Protein Viewer:ENSP00000504946.1Re-query CCDS DB by Nucleotide ID:ENST00000680682Re-query CCDS DB by Protein ID:ENSP00000504946
Original member Current member EBI ENST00000681904.1 ENSP00000505815.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681904.1Link to Ensembl Protein Viewer:ENSP00000505815.1Re-query CCDS DB by Nucleotide ID:ENST00000681904Re-query CCDS DB by Protein ID:ENSP00000505815
Original member Current member EBI ENST00000679934.1 ENSP00000505918.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679934.1Link to Ensembl Protein Viewer:ENSP00000505918.1Re-query CCDS DB by Nucleotide ID:ENST00000679934Re-query CCDS DB by Protein ID:ENSP00000505918
Original member Current member EBI ENST00000681074.1 ENSP00000506304.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681074.1Link to Ensembl Protein Viewer:ENSP00000506304.1Re-query CCDS DB by Nucleotide ID:ENST00000681074Re-query CCDS DB by Protein ID:ENSP00000506304
Original member Current member EBI ENST00000681400.1 ENSP00000506349.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681400.1Link to Ensembl Protein Viewer:ENSP00000506349.1Re-query CCDS DB by Nucleotide ID:ENST00000681400Re-query CCDS DB by Protein ID:ENSP00000506349
Original member Current member EBI ENST00000680658.1 ENSP00000506499.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680658.1Link to Ensembl Protein Viewer:ENSP00000506499.1Re-query CCDS DB by Nucleotide ID:ENST00000680658Re-query CCDS DB by Protein ID:ENSP00000506499
Original member Current member NCBI NM_017943.4 NP_060413.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017943.4Link to Protein Sequence:NP_060413.2Re-query CCDS DB by Nucleotide ID:NM_017943Re-query CCDS DB by Protein ID:NP_060413Link to BLAST:NP_060413.2
Original member Current member NCBI NM_152231.2 NP_689417.1 Accepted alive Link to Nucleotide Sequence:NM_152231.2Link to Protein Sequence:NP_689417.1Re-query CCDS DB by Nucleotide ID:NM_152231Re-query CCDS DB by Protein ID:NP_689417Link to BLAST:NP_689417.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060413.2 711 Q9NWN3 711 100% 0 0
NP_689417.1 711 Q9NWN3 711 100% 0 0

Chromosomal Locations for CCDS 32086.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 55350391 55352526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2136 nt):
ATGCACCTAAAGCCATATTGGAAGCTCCAGAAGAAAGAGCACCCCCCGGAAGTCAGCAGGGAAACGCAGA
GA
ACTCCTATGAACCACCAAAAGGCTGTAAATGATGAAACATGCAAAGCTAGCCACATAACATCAAGTGT
C
TTTCCTTCAGCCTCTCTCGGTAAAGCATCATCTCGAAAGCCATTTGGGATCCTTTCTCCAAATGTTCTG
TGC
AGTATGAGTGGGAAGAGTCCTGTAGAGAGCAGCTTGAATGTTAAAACCAAAAAGAATGCACCATCTG
CA
ACGATCCACCAGGGCGAAGAAGAAGGACCACTTGATATCTGGGCTGTTGTGAAACCTGGAAATACCAA
G
GAAAAAATTGCATTCTTTGCATCCCACCAGTGTAGTAACAGGATAGGATCTATGAAAATAAAAAGTTCC
TGG
GATATTGATGGGAGAGCTACTAAGAGAAGGAAAAAATCAGGGGATCTTAAAAAAGCCAAGGTACAGG
TG
GAAAGGATGAGGGAGGTTAACAGCAGGTGCTACCAACCTGAGCCTTTTGCATGTGGCATTGAGCACTG
T
TCTGTGCACTATGTGAGTGACAGTGGGGATGGAGTCTATGCTGGGAGGCCTCTGTCAGTTATACAGATG
GTT
GCCTTCTTGGAGCAAAGAGCCAGTGCTCTGCTAGCTAGCTGTTCAAAAAACTGCACAAACTCACCTG
CA
ATTGTGAGGTTTTCTGGCCAATCCAGAGGTGTGCCTGCAGTGTCTGAGTCCTATTCTGCCCCAGGAGC
T
TGTGAAGAACCCACAGAAAGGGGAAATCTTGAGGTTGGTGAACCACAGAGCGAACCAGTCCGTGTCCTT
GAC
ATGGTAGCCAAGTTGGAGTCTGAGTGCCTGAAGCGGCAGGGCCAGCGTGAGCCTGGGAGCCTCTCAA
GG
AATAACAGCTTCCGTCGAAATGTGGGCAGAGTATTGCTTGCAAATAGCACTCAGGCTGATGAAGGCAA
A
ACAAAGAAAGGCGTCTTGGAGGCACCTGACACTCAGGTGAATCCTGTGGGGTCTGTATCTGTGGATTGT
GGC
CCTTCAAGAGCTGATCGTTGTTCTCCTAAGGAGGACCAGGCCTGGGACGGTGCTTCTCAGGACTGCC
CC
CCATTGCCAGCAGGAGTGAGTTTCCACATAGACAGTGCAGAGTTAGAGCCGGGTTCGCAAACTGCCGT
G
AAAAACAGCAACAGATATGATGTGGAAATGACAGATGAACTCGTTGGGTTACCTTTTTCCTCTCATACC
TAT
TCCCAAGCCTCTGAATTGCCCACAGATGCTGTTGATTGTATGAGCAGAGAGCTTGTGTCCCTTACTA
GC
CGAAATCCTGATCAAAGAAAAGAATCTTTGTGCATTAGTATCACTGTGTCCAAGGTAGACAAAGACCA
G
CCTTCCATTTTAAACTCCTGTGAAGACCCAGTTCCAGGGATGTTGTTTTTTTTGCCACCTGGTCAGCAC
TTG
TCAGACTATTCCCAGTTGAATGAAAGCACAACAAAAGAGTCTTCAGAGGCCAGCCAGCTTGAAGATG
CT
GCTGGGGGTGACAGTGCATCTGAGGAAAAAAGTGGGTCTGCTGAGCCATTTGTACTGCCAGCCTCTTC
T
GTGGAAAGTACATTACCAGTGCTTGAGGCATCCAGTTGGAAGAAGCAGGTGTCGCATGACTTCCTGGAG
ACC
AGGTTTAAAATCCAGCAGCTTTTGGAGCCTCAGCAGTACATGGCTTTTCTGCCCCACCACATTATGG
TA
AAAATCTTCAGGTTACTTCCCACCAAGAGTTTAGTGGCCCTTAAATGTACCTGCTGCTATTTCAAGTT
T
ATCATTGAGTACTACAATATCAGGCCAGCAGATTCTCGCTGGGTTCGAGATCCACGCTATAGAGAGGAT
CCT
TGCAAACAGTGCAAGAAAAAGTATGTGAAAGGGGATGTGTCCCTGTGCCGATGGCACCCCAAGCCCT
AT
TGCCAGGCATTGCCCTATGGGCCAGGGTATTGGATGTGCTGCCACCGGTCTCAGAAAGGATTCCCTGG
C
TGTAAGCTGGGGCTTCATGACAATCACTGGGTTCCTGCCTGCCACAGCTTTAATCGGGCAATCCATAAG
AAA
GCAAAAGGGACTGAAGCTGAAGAGGAATACTAA


Translation (711 aa):
MHLKPYWKLQKKEHPPEVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRKPFGILSPNVL
C
SMSGKSPVESSLNVKTKKNAPSATIHQGEEEGPLDIWAVVKPGNTKEKIAFFASHQCSNRIGSMKIKSS
W
DIDGRATKRRKKSGDLKKAKVQVERMREVNSRCYQPEPFACGIEHCSVHYVSDSGDGVYAGRPLSVIQM
V
AFLEQRASALLASCSKNCTNSPAIVRFSGQSRGVPAVSESYSAPGACEEPTERGNLEVGEPQSEPVRVL
D
MVAKLESECLKRQGQREPGSLSRNNSFRRNVGRVLLANSTQADEGKTKKGVLEAPDTQVNPVGSVSVDC
G
PSRADRCSPKEDQAWDGASQDCPPLPAGVSFHIDSAELEPGSQTAVKNSNRYDVEMTDELVGLPFSSHT
Y
SQASELPTDAVDCMSRELVSLTSRNPDQRKESLCISITVSKVDKDQPSILNSCEDPVPGMLFFLPPGQH
L
SDYSQLNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFVLPASSVESTLPVLEASSWKKQVSHDFLE
T
RFKIQQLLEPQQYMAFLPHHIMVKIFRLLPTKSLVALKCTCCYFKFIIEYYNIRPADSRWVRDPRYRED
P
CKQCKKKYVKGDVSLCRWHPKPYCQALPYGPGYWMCCHRSQKGFPGCKLGLHDNHWVPACHSFNRAIHK
K
AKGTEAEEEY




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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