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Report for CCDS32087.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32087.1 Public Homo sapiens 14 ATG14 24 110 108 CCDS HistoryNCBI Gene:22863Re-query CCDS DB by CCDS ID:32087.1Re-query CCDS DB by GeneID:22863See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32087.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247178.6 ENSP00000247178.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247178.6Link to Ensembl Protein Viewer:ENSP00000247178.5Re-query CCDS DB by Nucleotide ID:ENST00000247178Re-query CCDS DB by Protein ID:ENSP00000247178
Original member Current member NCBI NM_014924.5 NP_055739.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014924.5Link to Protein Sequence:NP_055739.2Re-query CCDS DB by Nucleotide ID:NM_014924Re-query CCDS DB by Protein ID:NP_055739Link to BLAST:NP_055739.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055739.2 492 Q6ZNE5-1 492 100% 0 0

Chromosomal Locations for CCDS 32087.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 55369619 55369925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55377819 55377904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55377984 55378074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55380573 55380690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55381962 55382191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55385859 55386096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55390911 55390992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55395940 55395982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55397372 55397434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55411602 55411822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGGCGTCTCCCAGTGGGAAGGGAGCCCGGGCGCTGGAGGCTCCTGGCTGCGGGCCCCGGCCGCTCGCCC
GGGACCTGGTGGACTCCGTGGACGATGCGGAGGGGCTGTACGTGGCTGTGGAGCGCTGCCCGCTGTGCAA
CACTACCCGCCGGCGGCTGACCTGCGCCAAATGCGTTCAGAGCGGCGATTTCGTCTACTTCGACGGCCGC
GACCGGGAGAGGTTTATCGACAAGAAGGAAAGGTTAAGCCGACTTAAGAGCAAGCAAGAAGAATTTCAGA
AAGAAGTGTTAAAAGCTATGGAAGGAAAATGGATAACAGATCAGTTGAGATGGAAAATAATGTCCTGCAA
GATGAGGATTGAACAGTTAAAACAAACAATATGTAAAGGAAATGAAGAAATGGAGAAAAATTCTGAAGGC
CTTCTCAAAACCAAGGAAAAGAATCAGAAGCTTTACAGTCGAGCACAACGGCACCAAGAGAAAAAGGAGA
AGATTCAGAGGCATAATCGCAAACTTGGTGACCTGGTAGAAAAAAAGACCATTGACTTAAGAAGTCATTA
TGAGCGTCTGGCAAATCTTCGACGATCCCATATATTAGAGCTCACCTCTGTCATTTTTCCAATCGAGGAA
GTAAAGACGGGTGTGAGAGACCCCGCAGATGTGTCTTCAGAGAGTGACAGTGCCATGACCTCCAGCACTG
TGAGCAAGCTTGCTGAAGCCCGGAGGACAACTTACCTCTCAGGACGATGGGTCTGTGACGATCACAACGG
AGACACCAGCATTAGCATTACAGGGCCTTGGATTAGCCTCCCTAACAATGGGGACTACTCTGCCTACTAC
AGCTGGGTGGAGGAGAAGAAAACAACCCAGGGGCCTGACATGGAGCAGAGTAACCCTGCCTACACCATCA
GTGCTGCGCTGTGCTATGCAACTCAGCTGGTCAACATTCTGTCTCATATACTTGATGTAAATCTTCCCAA
AAAGCTCTGCAACAGTGAATTTTGTGGCGAAAATCTAAGCAAGCAGAAATTTACTCGAGCAGTGAAGAAA
CTGAATGCAAATATTCTTTACCTTTGTTTTTCTCAGCATGTAAATTTAGATCAATTACAACCACTGCATA
CCCTCAGGAATCTAATGTACCTGGTCAGTCCAAGCTCTGAACACCTAGGCAGGTCAGGGCCCTTTGAAGT
ACGAGCAGACCTTGAGGAGTCCATGGAATTTGTGGATCCCGGAGTTGCTGGAGAATCAGATGAGAGCGGA
GATGAGCGCGTCAGCGATGAAGAAACCGACCTGGGCACAGACTGGGAGAACTTGCCTAGTCCCCGGTTTT
GTGATATCCCTTCCCAGTCTGTGGAAGTCTCCCAGAGTCAGAGCACCCAGGCGTCCCCACCCATCGCGAG
CAGCAGTGCAGGTGGGATGATCTCCTCTGCAGCAGCCTCGGTGACCTCCTGGTTTAAAGCTTACACTGGA
CACCGTTAA

Translation (492 aa):
MASPSGKGARALEAPGCGPRPLARDLVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCVQSGDFVYFDGR
DRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNSEG
LLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLANLRRSHILELTSVIFPIEE
VKTGVRDPADVSSESDSAMTSSTVSKLAEARRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYY
SWVEEKKTTQGPDMEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKK
LNANILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVAGESDESG
DERVSDEETDLGTDWENLPSPRFCDIPSQSVEVSQSQSTQASPPIASSSAGGMISSAAASVTSWFKAYTG
HR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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