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Report for CCDS32265.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32265.1 Public Homo sapiens 15 USP3 24 110 108 CCDS HistoryNCBI Gene:9960Re-query CCDS DB by CCDS ID:32265.1Re-query CCDS DB by GeneID:9960See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32265.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380324.8 ENSP00000369681.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380324.8Link to Ensembl Protein Viewer:ENSP00000369681.3Re-query CCDS DB by Nucleotide ID:ENST00000380324Re-query CCDS DB by Protein ID:ENSP00000369681
Original member Current member NCBI NM_006537.4 NP_006528.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006537.4Link to Protein Sequence:NP_006528.2Re-query CCDS DB by Nucleotide ID:NM_006537Re-query CCDS DB by Protein ID:NP_006528Link to BLAST:NP_006528.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006528.2 520 Q9Y6I4-1 520 100% 0 0

Chromosomal Locations for CCDS 32265.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 63504740 63504830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63532647 63532707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63537025 63537156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63553715 63553798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63556667 63556748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63558106 63558188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63559857 63559970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63562895 63563008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63570433 63570579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63574046 63574152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63574323 63574403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63588305 63588423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63588702 63588815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63588944 63589011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 63590661 63590826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGGAGTGTCCACACCTGAGCTCCAGCGTCTGCATTGCTCCGGACTCAGCCAAGTTCCCCAACGGCTCCC
CGTCGTCCTGGTGCTGCAGCGTGTGCCGGTCCAACAAAAGCCCTTGGGTCTGTTTGACTTGTTCAAGTGT
CCACTGTGGAAGGTATGTGAATGGCCATGCAAAAAAACATTATGAAGATGCACAAGTACCTTTAACCAAC
CATAAGAAATCAGAAAAGCAAGATAAAGTTCAGCACACAGTATGTATGGATTGCAGTAGCTACAGTACAT
ACTGTTATCGCTGTGATGATTTTGTGGTTAATGACACCAAGCTGGGACTGGTACAGAAAGTCAGAGAACA
CTTACAGAACTTGGAAAACTCAGCTTTCACAGCTGACAGGCATAAGAAAAGAAAACTTTTGGAAAACTCA
ACACTAAACAGCAAGTTATTAAAAGTAAATGGAAGCACCACTGCCATTTGTGCCACAGGCCTTCGGAATT
TGGGGAACACATGTTTCATGAATGCCATCCTTCAGTCACTCAGTAACATTGAGCAGTTTTGCTGTTATTT
CAAAGAACTGCCCGCCGTGGAGTTAAGGAATGGGAAAACAGCAGGAAGGCGGACATACCACACCAGGAGC
CAAGGGGATAACAATGTGTCTTTGGTAGAAGAGTTTAGAAAGACACTCTGTGCTTTATGGCAAGGCAGCC
AGACTGCATTTAGCCCAGAGTCCTTATTTTATGTTGTTTGGAAGATTATGCCAAACTTTAGGGGCTATCA
ACAGCAGGACGCCCATGAATTCATGCGCTACCTTTTGGACCACCTACACTTGGAACTTCAGGGCGGTTTC
AACGGTGTTTCCCGCTCAGCAATTCTGCAGGAGAATTCTACTCTGTCTGCAAGTAACAAGTGTTGCATAA
ATGGAGCATCTACTGTTGTCACGGCTATATTCGGAGGCATTCTCCAAAATGAGGTTAACTGCCTCATATG
TGGGACAGAATCTAGAAAGTTTGATCCATTCCTAGACCTTTCATTAGATATTCCAAGTCAGTTCAGAAGT
AAGCGCTCTAAGAATCAAGAAAATGGACCAGTTTGTTCGTTACGAGATTGTCTTCGCAGTTTTACCGACT
TAGAAGAACTTGATGAGACAGAGTTATATATGTGCCATAAATGCAAAAAGAAACAAAAGTCCACAAAAAA
GTTTTGGATTCAAAAACTACCCAAGGTGCTATGCTTACATTTGAAAAGATTTCATTGGACAGCATATTTA
AGAAATAAAGTTGATACATACGTAGAATTTCCACTGAGAGGCCTAGACATGAAATGCTACTTACTAGAGC
CTGAGAACAGTGGCCCGGAGAGCTGCCTGTATGACCTCGCCGCTGTGGTGGTGCACCATGGTTCCGGGGT
TGGTTCTGGACATTACACAGCATACGCAACTCACGAAGGCCGCTGGTTCCACTTCAATGACAGTACTGTA
ACACTGACTGACGAGGAGACTGTGGTGAAGGCGAAGGCCTACATCCTTTTCTACGTGGAACACCAGGCCA
AAGCTGGATCGGATAAACTTTAA

Translation (520 aa):
MECPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTN
HKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKLLENS
TLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRS
QGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGF
NGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRS
KRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL
RNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTV
TLTDEETVVKAKAYILFYVEHQAKAGSDKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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