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Report for CCDS32276.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32276.2 Public Homo sapiens 15 NOX5 24 110 108 CCDS HistoryNCBI Gene:79400Re-query CCDS DB by CCDS ID:32276.2Re-query CCDS DB by GeneID:79400See the combined annotation on chromosome 15 in Sequence Viewer

Public Note for CCDS 32276.1
The coding region has been updated to extend the N-terminus to one that is more supported by available conservation data or publications.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32276.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388866.8 ENSP00000373518.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000388866.8Link to Ensembl Protein Viewer:ENSP00000373518.3Re-query CCDS DB by Nucleotide ID:ENST00000388866Re-query CCDS DB by Protein ID:ENSP00000373518
Original member Current member NCBI NM_024505.4 NP_078781.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024505.4Link to Protein Sequence:NP_078781.3Re-query CCDS DB by Nucleotide ID:NM_024505Re-query CCDS DB by Protein ID:NP_078781Link to BLAST:NP_078781.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078781.3 765 Q96PH1-1 765 100% 0 0

Chromosomal Locations for CCDS 32276.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 69014736 69014785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69026528 69026651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69028215 69028365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69031518 69031812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69033043 69033277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69035354 69035507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69035758 69035936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69037028 69037210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69038857 69038989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69042663 69042805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69046822 69046866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69047413 69047537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69047830 69047911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69048959 69049058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69055334 69055500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 69056565 69056696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2298 nt):
ATGAACACATCTGGAGACCCAGCCCAGACGGGCCCTGAAGGCTGTAGAGGCACCATGAGTGCCGAGGAGG
ATGCCAGGTGGCTCCGGTGGGTGACTCAGCAGTTTAAGACCATTGCAGGAGAAGATGGGGAGATCAGCCT
GCAAGAATTCAAAGCAGCTCTGCATGTGAAAGAGTCCTTCTTTGCAGAGCGATTCTTTGCCCTATTTGAC
TCCGATAGAAGTGGCACCATCACCCTCCAGGAGCTGCAGGAGGCACTGACCCTGCTCATCCATGGCAGCC
CCATGGACAAACTCAAATTCCTCTTCCAGGTGTATGACATCGATGTGTGTGCACGGCAGGGGGCGTCTGC
AGGTACAGAGTGGGGTGCTGGGGCAGGCCCGCACTGGGCTTCATCCCCACTCGGGACAGGCAGTGGCTCC
ATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGAGAGCGCCATCTCGCTGCCTGACG
AGAAGCTGGACCAGCTGACGCTGGCGCTCTTCGAATCGGCCGACGCGGACGGCAACGGGGCCATCACCTT
CGAGGAGCTCCGGGACGAGCTGCAGCGCTTCCCCGGAGTCATGGAGAACCTGACCATCAGCGCTGCCCAC
TGGCTGACGGCCCCCGCCCCCCGCCCACGCCCGCGCCGGCCGCGCCAGCTGACCCGCGCCTACTGGCACA
ACCACCGCAGCCAGCTGTTCTGCCTGGCCACCTATGCAGGCCTCCACGTGCTGCTCTTCGGGCTGGCGGC
CAGCGCGCACCGGGACCTCGGCGCCAGCGTCATGGTGGCCAAGGGCTGCGGCCAGTGCCTCAACTTCGAC
TGCAGCTTCATCGCGGTGCTGATGCTCAGACGCTGCCTCACCTGGCTGCGGGCCACGTGGCTGGCTCAAG
TCCTACCACTGGACCAGAACATCCAGTTCCACCAGCTTATGGGCTACGTGGTAGTGGGGCTGTCCCTCGT
GCACACCGTGGCTCACACTGTGAACTTTGTACTCCAGGCTCAGGCGGAGGCCAGCCCTTTCCAGTTCTGG
GAGCTGCTGCTCACCACGAGGCCTGGCATTGGCTGGGTACACGGTTCGGCCTCCCCGACAGGTGTCGCTC
TGCTGCTGCTGCTCCTCCTCATGTTCATCTGCTCCAGTTCCTGCATCCGCAGGAGTGGCCACTTTGAGGT
GTTCTATTGGACTCACCTGTCCTACCTCCTCGTGTGGCTTCTGCTCATCTTTCATGGGCCCAACTTCTGG
AAGTGGCTGCTGGTGCCTGGAATCTTGTTTTTCCTGGAGAAGGCCATCGGACTGGCAGTGTCCCGCATGG
CAGCCGTGTGCATCATGGAAGTCAACCTCCTCCCCTCCAAGGTCACTCATCTCCTCATCAAGCGGCCCCC
TTTTTTTCACTATAGACCTGGTGACTACTTGTATCTGAACATCCCCACCATTGCTCGCTATGAGTGGCAC
CCCTTCACCATCAGCAGTGCTCCTGAGCAGAAAGACACTATCTGGCTGCACATTCGGTCCCAAGGCCAGT
GGACAAACAGGCTGTATGAGTCCTTCAAGGCATCAGACCCACTGGGCCGTGGTTCTAAGAGGCTGTCGAG
GAGTGTGACAATGAGAAAGAGTCAAAGGTCGTCCAAGGGCTCTGAGATACTTTTGGAGAAACACAAATTC
TGTAACATCAAGTGCTACATCGATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTGCCTCTGAGCATG
CCGTGCTCATCGGGGCAGGCATCGGCATCACCCCCTTTGCTTCCATTCTGCAGAGTATCATGTACAGGCA
CCAGAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACAACATGAAG
CTCCATAAGGTGGACTTTATCTGGATCAACAGAGACCAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGA
CTAAACTGGAGATGGACCAGGCCGAGGAGGCTCAATACGGCCGCTTCCTGGAGCTGCATATGTACATGAC
ATCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGACCTCCTGGCCAACAAG
GAGAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGT
TCCAGAAAGTGGCTGCTGAGAAGAAGGGCAAGGTGCAGGTCTTCTTCTGTGGCTCCCCAGCTCTGGCCAA
GGTGCTGAAGGGCCATTGTGAGAAGTTCGGCTTCAGATTTTTCCAAGAGAATTTCTAG

Translation (765 aa):
MNTSGDPAQTGPEGCRGTMSAEEDARWLRWVTQQFKTIAGEDGEISLQEFKAALHVKESFFAERFFALFD
SDRSGTITLQELQEALTLLIHGSPMDKLKFLFQVYDIDVCARQGASAGTEWGAGAGPHWASSPLGTGSGS
IDPDELRTVLQSCLRESAISLPDEKLDQLTLALFESADADGNGAITFEELRDELQRFPGVMENLTISAAH
WLTAPAPRPRPRRPRQLTRAYWHNHRSQLFCLATYAGLHVLLFGLAASAHRDLGASVMVAKGCGQCLNFD
CSFIAVLMLRRCLTWLRATWLAQVLPLDQNIQFHQLMGYVVVGLSLVHTVAHTVNFVLQAQAEASPFQFW
ELLLTTRPGIGWVHGSASPTGVALLLLLLLMFICSSSCIRRSGHFEVFYWTHLSYLLVWLLLIFHGPNFW
KWLLVPGILFFLEKAIGLAVSRMAAVCIMEVNLLPSKVTHLLIKRPPFFHYRPGDYLYLNIPTIARYEWH
PFTISSAPEQKDTIWLHIRSQGQWTNRLYESFKASDPLGRGSKRLSRSVTMRKSQRSSKGSEILLEKHKF
CNIKCYIDGPYGTPTRRIFASEHAVLIGAGIGITPFASILQSIMYRHQKRKHTCPSCQHSWIEGVQDNMK
LHKVDFIWINRDQRSFEWFVSLLTKLEMDQAEEAQYGRFLELHMYMTSALGKNDMKAIGLQMALDLLANK
EKKDSITGLQTRTQPGRPDWSKVFQKVAAEKKGKVQVFFCGSPALAKVLKGHCEKFGFRFFQENF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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