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Report for CCDS32338.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
32338.1 |
Public |
Homo sapiens |
15 |
MCTP2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:55784](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:32338.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:55784](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 15 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 32338.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000357742.10 |
ENSP00000350377.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000357742.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000350377.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000357742](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000350377](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001385001.1 |
NP_001371930.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001385001.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371930.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001385001](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371930](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371930.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001385002.1 |
NP_001371931.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001385002.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371931.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001385002](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371931](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371931.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001385003.1 |
NP_001371932.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001385003.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371932.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001385003](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371932](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371932.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_018349.4 |
NP_060819.3 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_018349.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_060819.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_018349](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_060819](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_060819.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 32338.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2637 nt): ATGGATCTGGATAAACCATCTGTTTGGGGCTCATTAAAACAGCGGACCAGGCCATTGTTGATCAACTTGA GCAAGAAGAAGGTGAAAAAGAACCCAAGTAAGCCCCCAGATCTACGGGCAAGGCATCACTTGGACCGCCG TCTCAGCCTCTCTGTGCCTGATCTCCTGGAGGCTGAGGCCTTGGCCCCAGAGGGCCGGCCTTACTCCGGG CCACAGTCTTCCTACACCTCGGTGCCCAGCAGTCTGTCCACTGCAGGGATCTTTCCCAAGAGCAGCAGTA GCTCCTTGAAACAGTCTGAAGAAGAATTGGATTGGAGCCAGGAAGAAGCCAGTCACCTCCATGTGGTGGA AACAGACTCAGAGGAGGCCTATGCCTCTCCTGCTGAGCGGAGACGGGTGTCCAGCAACGGCATCTTTGAT CTTCAGAAAACTTCCCTTGGAGGGGATGCACCAGAAGAGCCAGAGAAGCTATGTGGAAGCAGTGACCTGA ATGCTTCTATGACATCTCAACATTTTGAAGAACAATCTGTACCGGGGGAAGCCAGTGATGGCTTGAGTAA CCTCCCCAGCCCTTTTGCGTACCTCCTCACCATACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGAT CGCTGTGGCACAAGTGATCCTTATGTGAAATTTAAGCTGAATGGGAAGACGCTGTACAAAAGTAAAGTCA TATATAAGAACTTGAACCCAGTATGGGATGAGATAGTTGTATTGCCAATCCAAAGCCTTGATCAAAAGCT ACGTGTGAAGGTATATGATCGAGATTTAACCACATCTGATTTCATGGGTTCTGCATTTGTCATTCTCAGT GATCTTGAGCTTAACAGAACAACTGAACATATTTTAAAACTGGAAGATCCAAACAGTTTAGAAGATGACA TGGGAGTGATCGTGTTAAATTTGAACCTAGTGGTAAAACAGGGTGATTTCAAGAGACACCGTTGGTCAAA TCGGAAGCGATTAAGTGCCAGCAAGTCCTCTTTGATACGCAACCTACGGCTCTCTGAGTCCTTGAAAAAG AACCAACTCTGGAACGGGATTATAAGTATAACTTTGTTGGAAGGGAAGAATGTCTCAGGAGGAAGCATGA CAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATAAAAGTAAGACACTGTGTAAGAGTGCAAA TCCGCAGTGGCAGGAACAGTTTGACTTTCACTACTTCTCTGACAGGATGGGCATTTTGGACATTGAAGTG TGGGGAAAGGACAACAAAAAGCATGAGGAACGTCTGGGCACGTGTAAAGTGGATATCTCGGCACTCCCTC TGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGGGGCTCTCCTTATGTTGGTCACACT TACACCCTGTGCGGGGGTCTCCGTCTCTGATCTGTGTGTCTGCCCCTTAGCAGACCTCAGCGAAAGAAAG CAGATTACCCAGCGATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAGTGA AGGTTTTAAAGGCAGCAGATCTCTTAGCGGCAGATTTCTCAGGGAAGAGTGACCCATTTTGCTTGTTGGA GTTAGGCAATGACCGACTTCAGACGCATACCGTCTACAAAAACCTCAACCCTGAATGGAACAAAGTTTTT ACATTTCCCATTAAAGATATCCATGATGTTTTGGAAGTGACAGTGTTTGATGAAGATGGAGATAAACCCC CAGATTTTCTTGGAAAAGTTGCCATTCCCTTGCTGTCCATTAGAGATGGACAACCGAATTGTTATGTACT AAAGAATAAAGATTTAGAACAAGCTTTTAAAGGAGTTATTTACTTAGAGATGGACCTTATATATAATCCG GTGAAAGCAAGTATTAGGACTTTTACTCCCCGGGAAAAGCGCTTTGTTGAAGACAGCCGCAAGCTGTCCA AAAAGATCTTATCAAGAGATGTGGACCGTGTGAAAAGAATCACTATGGCAATATGGAATACAATGCAGTT CCTTAAAAGCTGCTTCCAGTGGGAATCCACATTAAGAAGTACAATAGCATTCGCGGTATTTTTGATCACT GTCTGGAATTTTGAACTATATATGATCCCCTTGGCATTGTTGCTGATCTTTGTCTACAATTTCATCAGAC CTGTGAAAGGCAAGGTCAGCAGCATCCAGGACAGCCAGGAGAGCACAGACATAGATGACGAGGAGGATGA AGATGACAAGGAATCTGAGAAAAAGGGGTTGATTGAAAGAATCTATATGGTACAGGATATTGTTTCAACT GTTCAAAACGTCTTGGAGGAAATAGCTTCTTTTGGAGAAAGGATTAAGAACACATTTAACTGGACGGTCC CCTTCCTTTCATCTCTGGCCTGTTTGATTCTGGCAGCAGCCACCATCATTTTGTATTTCATTCCACTGCG GTACATCATTTTAATCTGGGGCATAAATAAATTTACTAAGAAGCTTCGAAATCCCTATTCCATCGACAAT AATGAGCTACTAGACTTCCTCTCTAGGGTACCGTCTGATGTTCAAAAGGTGCAGTATGCAGAATTGAAAC TCTGCAGCAGCCACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAG
Translation (878 aa): MDLDKPSVWGSLKQRTRPLLINLSKKKVKKNPSKPPDLRARHHLDRRLSLSVPDLLEAEALAPEGRPYSG PQSSYTSVPSSLSTAGIFPKSSSSSLKQSEEELDWSQEEASHLHVVETDSEEAYASPAERRRVSSNGIFD LQKTSLGGDAPEEPEKLCGSSDLNASMTSQHFEEQSVPGEASDGLSNLPSPFAYLLTIHLKEGRNLVVRD RCGTSDPYVKFKLNGKTLYKSKVIYKNLNPVWDEIVVLPIQSLDQKLRVKVYDRDLTTSDFMGSAFVILS DLELNRTTEHILKLEDPNSLEDDMGVIVLNLNLVVKQGDFKRHRWSNRKRLSASKSSLIRNLRLSESLKK NQLWNGIISITLLEGKNVSGGSMTEMFVQLKLGDQRYKSKTLCKSANPQWQEQFDFHYFSDRMGILDIEV WGKDNKKHEERLGTCKVDISALPLKQANCLELPLDSCLGALLMLVTLTPCAGVSVSDLCVCPLADLSERK QITQRYCLQNSLKDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVF TFPIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLIYNP VKASIRTFTPREKRFVEDSRKLSKKILSRDVDRVKRITMAIWNTMQFLKSCFQWESTLRSTIAFAVFLIT VWNFELYMIPLALLLIFVYNFIRPVKGKVSSIQDSQESTDIDDEEDEDDKESEKKGLIERIYMVQDIVST VQNVLEEIASFGERIKNTFNWTVPFLSSLACLILAAATIILYFIPLRYIILIWGINKFTKKLRNPYSIDN NELLDFLSRVPSDVQKVQYAELKLCSSHSPLRKKRSAL
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