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Report for CCDS32349.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32349.1 Public Homo sapiens 16 MRPL28 24 110 108 CCDS HistoryNCBI Gene:10573Re-query CCDS DB by CCDS ID:32349.1Re-query CCDS DB by GeneID:10573See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32349.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000199706.13 ENSP00000199706.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000199706.13Link to Ensembl Protein Viewer:ENSP00000199706.7Re-query CCDS DB by Nucleotide ID:ENST00000199706Re-query CCDS DB by Protein ID:ENSP00000199706
Original member Current member EBI ENST00000389675.6 ENSP00000374326.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000389675.6Link to Ensembl Protein Viewer:ENSP00000374326.2Re-query CCDS DB by Nucleotide ID:ENST00000389675Re-query CCDS DB by Protein ID:ENSP00000374326
Original member Current member EBI ENST00000648346.1 ENSP00000497004.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648346.1Link to Ensembl Protein Viewer:ENSP00000497004.1Re-query CCDS DB by Nucleotide ID:ENST00000648346Re-query CCDS DB by Protein ID:ENSP00000497004
Original member Current member NCBI NM_006428.5 NP_006419.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006428.5Link to Protein Sequence:NP_006419.2Re-query CCDS DB by Nucleotide ID:NM_006428Re-query CCDS DB by Protein ID:NP_006419Link to BLAST:NP_006419.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006419.2 256 Q13084 256 100% 0 0

Chromosomal Locations for CCDS 32349.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 367675 367782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 368328 368414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 368501 368635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 369068 369220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 369931 370218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (771 nt):
ATGCCTCTACACAAGTATCCCGTGTGGCTCTGGAAGCGGCTGCAGCTGCGGGAGGGCATCTGTTCCCGCC
TGCCCGGCCACTACCTGCGCTCCCTGGAGGAGGAGCGGACGCCCACTCCCGTGCACTATAGGCCTCATGG
GGCCAAGTTCAAGATCAACCCCAAGAACGGGCAGCGGGAGCGTGTGGAGGACGTGCCCATTCCCATCTAC
TTTCCCCCCGAATCCCAGCGGGGGTTGTGGGGCGGCGAGGGCTGGATCCTGGGCCAAATATATGCCAACA
ACGACAAGCTCTCCAAGAGGCTGAAGAAAGTGTGGAAGCCACAGCTGTTTGAGCGAGAGTTCTACAGTGA
GATCCTGGACAAGAAGTTCACAGTGACTGTGACCATGCGGACCCTGGACCTCATCGATGAGGCTTATGGG
CTCGACTTTTACATCCTCAAGACCCCGAAGGAGGACCTGTGCTCCAAGTTTGGGATGGACCTGAAGCGAG
GGATGCTGCTGCGGCTTGCCCGGCAGGACCCCCAGCTGCACCCCGAGGACCCCGAGCGGCGGGCAGCCAT
CTACGACAAGTACAAGGAATTTGCCATCCCAGAGGAGGAGGCAGAGTGGGTGGGCCTCACGCTGGAGGAG
GCCATTGAGAAGCAGAGACTTTTGGAGGAGAAGGACCCTGTACCCCTGTTCAAGATCTATGTGGCGGAGC
TGATCCAGCAGCTGCAGCAGCAGGCACTGTCAGAGCCGGCGGTGGTGCAGAAGAGAGCCAGTGGCCAGTG
A

Translation (256 aa):
MPLHKYPVWLWKRLQLREGICSRLPGHYLRSLEEERTPTPVHYRPHGAKFKINPKNGQRERVEDVPIPIY
FPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDEAYG
LDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEFAIPEEEAEWVGLTLEE
AIEKQRLLEEKDPVPLFKIYVAELIQQLQQQALSEPAVVQKRASGQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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