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Report for CCDS32806.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32806.1 Public Homo sapiens 18 ZNF521 24 110 108 CCDS HistoryNCBI Gene:25925Re-query CCDS DB by CCDS ID:32806.1Re-query CCDS DB by GeneID:25925See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32806.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361524.8 ENSP00000354794.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361524.8Link to Ensembl Protein Viewer:ENSP00000354794.3Re-query CCDS DB by Nucleotide ID:ENST00000361524Re-query CCDS DB by Protein ID:ENSP00000354794
Original member Current member EBI ENST00000538137.6 ENSP00000440768.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538137.6Link to Ensembl Protein Viewer:ENSP00000440768.2Re-query CCDS DB by Nucleotide ID:ENST00000538137Re-query CCDS DB by Protein ID:ENSP00000440768
Original member Current member NCBI NM_015461.3 NP_056276.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015461.3Link to Protein Sequence:NP_056276.1Re-query CCDS DB by Nucleotide ID:NM_015461Re-query CCDS DB by Protein ID:NP_056276Link to BLAST:NP_056276.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056276.1 1311 Q96K83 1311 100% 0 0

Chromosomal Locations for CCDS 32806.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 25062712 25062741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25089465 25089580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25091950 25092081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25195160 25195244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25224345 25227697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25322008 25322187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25350907 25350946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3936 nt):
ATGTCTCGCCGCAAGCAAGCGAAACCGAGATCCCTCAAAGACCCCAACTGTAAACTTGAAGACAAGACTG
AAGATGGAGAGGCACTAGATTGTAAGAAGAGGCCGGAAGACGGGGAGGAGTTGGAAGACGAAGCTGTGCA
CAGCTGTGACAGCTGCCTCCAGGTGTTTGAATCGCTGAGCGATATCACAGAACACAAGATTAATCAATGT
CAACTGACAGATGGAGTGGATGTTGAAGATGATCCGACTTGCTCTTGGCCAGCTTCCTCACCTTCTAGCA
AGGATCAGACTTCCCCTAGCCATGGAGAAGGTTGCGATTTTGGAGAGGAAGAAGGTGGCCCTGGGCTTCC
ATACCCGTGTCAATTCTGTGACAAGTCGTTTAGCCGCCTCAGCTACCTAAAGCACCATGAGCAGAGTCAC
AGTGACAAACTGCCTTTCAAATGCACCTACTGCAGTAGGCTGTTCAAACACAAGCGCAGCCGAGATCGCC
ACATAAAACTCCACACCGGGGACAAGAAGTACCACTGCAGTGAATGTGATGCTGCGTTTTCCAGAAGTGA
TCACTTGAAGATCCACTTAAAGACTCACACGTCCAACAAGCCATATAAATGTGCCATTTGTCGCCGTGGG
TTTCTGTCCTCTAGTTCCTTACACGGACACATGCAGGTTCATGAGAGGAACAAGGACGGCTCTCAGTCCG
GTTCCAGGATGGAGGACTGGAAGATGAAGGACACTCAGAAGTGCAGTCAGTGTGAGGAAGGCTTTGACTT
CCCGGAAGACCTCCAAAAACACATTGCAGAGTGCCACCCCGAATGCTCCCCAAATGAGGACCGAGCGGCC
CTCCAGTGTGTCTACTGCCACGAGCTCTTCGTAGAGGAGACCTCCCTCATGAACCACATGGAGCAGGTGC
ATAGCGGGGAGAAGAAGAACTCATGCAGCATTTGTTCTGAGAGTTTCCACACAGTTGAGGAACTGTACAG
CCACATGGACAGTCACCAGCAACCGGAGTCATGCAATCACAGCAACAGCCCTTCCCTGGTCACGGTGGGC
TATACCTCCGTGTCCAGTACGACTCCAGATTCCAACCTCTCAGTGGACAGCTCAACCATGGTGGAAGCTG
CCCCGCCAATCCCAAAGAGTCGAGGGAGGAAGAGGGCCGCTCAACAAACCCCTGACATGACTGGTCCCTC
GAGTAAACAAGCAAAAGTTACCTACAGCTGTATTTACTGCAACAAACAATTATTTTCAAGTCTTGCAGTT
CTGCAGATTCACCTGAAAACTATGCACTTAGATAAGCCAGAACAGGCCCATATTTGTCAGTATTGCTTGG
AGGTCCTGCCCTCACTCTATAACCTAAATGAACATCTTAAGCAAGTGCATGAAGCTCAGGACCCAGGTCT
GATTGTTTCTGCCATGCCTGCCATTGTCTACCAGTGTAACTTCTGTTCCGAAGTTGTCAACGACCTCAAC
ACTCTTCAGGAACACATCCGATGTTCTCATGGATTTGCAAACCCTGCAGCTAAAGATAGTAATGCATTCT
TTTGTCCCCATTGCTATATGGGGTTTCTCACTGACTCTTCCCTGGAAGAGCATATTAGACAGGTTCATTG
TGACCTCAGTGGCTCCCGATTTGGGTCTCCAGTGCTTGGGACTCCCAAAGAACCAGTAGTAGAAGTCTAT
TCTTGTTCCTATTGTACAAATTCGCCAATATTCAACAGCGTTCTTAAACTGAACAAGCATATCAAAGAGA
ATCATAAAAACATTCCCTTGGCCCTGAATTATATCCACAATGGGAAGAAATCCAGGGCCTTAAGCCCCCT
ATCTCCTGTGGCCATAGAGCAGACATCTCTTAAGATGATGCAGGCAGTAGGAGGTGCACCTGCACGTCCC
ACTGGAGAATATATCTGTAATCAATGTGGTGCTAAGTACACATCCCTAGACAGCTTTCAGACTCACCTAA
AAACTCATCTCGACACTGTGCTTCCAAAATTGACCTGTCCTCAGTGCAACAAGGAATTCCCCAACCAAGA
ATCCTTGCTGAAGCATGTTACCATTCACTTTATGATCACTTCAACGTATTACATCTGTGAGAGTTGTGAC
AAGCAATTCACATCAGTGGATGACCTTCAGAAACACCTGCTGGACATGCACACCTTTGTCTTCTTTCGCT
GCACCCTCTGCCAGGAAGTTTTTGACTCAAAAGTCTCCATTCAGCTCCACTTGGCTGTGAAGCACAGTAA
CGAAAAGAAAGTCTATAGGTGCACATCTTGCAACTGGGACTTCCGCAACGAAACTGACTTGCAGCTCCAT
GTGAAACACAACCACCTGGAAAACCAAGGGAAAGTGCATAAGTGCATTTTCTGCGGTGAGTCCTTTGGCA
CCGAGGTGGAGCTGCAATGCCACATCACCACTCACAGTAAGAAGTACAACTGCAAGTTCTGTAGCAAAGC
CTTCCATGCGATCATTTTGTTAGAAAAACACTTGCGAGAAAAACACTGTGTATTCGAAACCAAGACACCC
AACTGTGGAACAAATGGAGCTTCCGAGCAAGTGCAGAAAGAGGAAGTGGAGCTGCAGACTTTGCTGACCA
ACAGCCAGGAGTCCCACAACAGTCACGATGGGAGCGAAGAAGACGTTGACACCTCTGAGCCTATGTACGG
CTGCGACATTTGTGGGGCAGCCTACACTATGGAAACTTTGCTGCAGAATCACCAGCTCCGAGACCACAAC
ATCAGACCTGGAGAAAGTGCCATCGTGAAAAAGAAAGCTGAGCTCATTAAAGGGAATTACAAGTGCAACG
TGTGCTCTCGAACCTTCTTCTCCGAAAATGGCCTCCGGGAACATATGCAGACCCACCTAGGCCCTGTCAA
ACACTACATGTGCCCTATTTGCGGAGAGCGGTTTCCCTCCCTTTTAACTCTTACTGAACACAAAGTCACG
CATAGTAAGAGTCTTGATACTGGAAACTGCCGGATTTGCAAGATGCCTCTCCAGAGTGAAGAGGAGTTTT
TAGAGCATTGCCAAATGCACCCTGACTTGAGGAATTCCCTGACAGGCTTTCGCTGCGTGGTGTGCATGCA
GACAGTGACCTCCACCTTGGAACTCAAAATCCATGGGACGTTCCACATGCAAAAGACAGGGAATGGGTCT
GCAGTTCAGACCACAGGGCGGGGCCAGCACGTCCAAAAACTGTATAAGTGCGCATCTTGCCTCAAAGAAT
TCCGTTCCAAGCAAGATCTGGTGAAACTTGATATCAATGGCCTGCCATATGGTCTGTGTGCCGGCTGCGT
GAATCTCAGTAAGAGCGCCAGCCCAGGCATTAACGTCCCTCCCGGCACGAATAGACCAGGCTTGGGCCAG
AATGAGAATCTGAGTGCCATTGAGGGGAAAGGCAAGGTGGGGGGACTGAAGACACGCTGCTCTAGCTGCA
ACGTTAAGTTTGAGTCTGAAAGTGAACTCCAGAACCACATCCAAACCATCCACCGAGAGCTCGTGCCAGA
CAGCAACAGCACACAGTTGAAAACGCCCCAAGTATCACCAATGCCCAGAATCAGTCCCTCCCAGTCGGAT
GAGAAGAAGACCTATCAATGCATCAAGTGTCAGATGGTTTTCTACAATGAATGGGATATTCAGGTTCATG
TTGCAAATCACATGATTGATGAAGGACTGAACCATGAATGCAAACTCTGCAGCCAGACCTTTGACTCTCC
TGCCAAACTCCAGTGCCACCTGATAGAGCACAGCTTCGAAGGGATGGGAGGCACCTTCAAGTGTCCAGTC
TGCTTTACAGTATTTGTTCAAGCAAACAAGTTGCAGCAGCATATTTTCTCTGCCCATGGACAAGAAGACA
AGATCTATGACTGTACACAATGTCCACAGAAGTTTTTCTTCCAAACAGAGCTGCAGAATCATACAATGAC
CCAACACAGCAGTTAG

Translation (1311 aa):
MSRRKQAKPRSLKDPNCKLEDKTEDGEALDCKKRPEDGEELEDEAVHSCDSCLQVFESLSDITEHKINQC
QLTDGVDVEDDPTCSWPASSPSSKDQTSPSHGEGCDFGEEEGGPGLPYPCQFCDKSFSRLSYLKHHEQSH
SDKLPFKCTYCSRLFKHKRSRDRHIKLHTGDKKYHCSECDAAFSRSDHLKIHLKTHTSNKPYKCAICRRG
FLSSSSLHGHMQVHERNKDGSQSGSRMEDWKMKDTQKCSQCEEGFDFPEDLQKHIAECHPECSPNEDRAA
LQCVYCHELFVEETSLMNHMEQVHSGEKKNSCSICSESFHTVEELYSHMDSHQQPESCNHSNSPSLVTVG
YTSVSSTTPDSNLSVDSSTMVEAAPPIPKSRGRKRAAQQTPDMTGPSSKQAKVTYSCIYCNKQLFSSLAV
LQIHLKTMHLDKPEQAHICQYCLEVLPSLYNLNEHLKQVHEAQDPGLIVSAMPAIVYQCNFCSEVVNDLN
TLQEHIRCSHGFANPAAKDSNAFFCPHCYMGFLTDSSLEEHIRQVHCDLSGSRFGSPVLGTPKEPVVEVY
SCSYCTNSPIFNSVLKLNKHIKENHKNIPLALNYIHNGKKSRALSPLSPVAIEQTSLKMMQAVGGAPARP
TGEYICNQCGAKYTSLDSFQTHLKTHLDTVLPKLTCPQCNKEFPNQESLLKHVTIHFMITSTYYICESCD
KQFTSVDDLQKHLLDMHTFVFFRCTLCQEVFDSKVSIQLHLAVKHSNEKKVYRCTSCNWDFRNETDLQLH
VKHNHLENQGKVHKCIFCGESFGTEVELQCHITTHSKKYNCKFCSKAFHAIILLEKHLREKHCVFETKTP
NCGTNGASEQVQKEEVELQTLLTNSQESHNSHDGSEEDVDTSEPMYGCDICGAAYTMETLLQNHQLRDHN
IRPGESAIVKKKAELIKGNYKCNVCSRTFFSENGLREHMQTHLGPVKHYMCPICGERFPSLLTLTEHKVT
HSKSLDTGNCRICKMPLQSEEEFLEHCQMHPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFHMQKTGNGS
AVQTTGRGQHVQKLYKCASCLKEFRSKQDLVKLDINGLPYGLCAGCVNLSKSASPGINVPPGTNRPGLGQ
NENLSAIEGKGKVGGLKTRCSSCNVKFESESELQNHIQTIHRELVPDSNSTQLKTPQVSPMPRISPSQSD
EKKTYQCIKCQMVFYNEWDIQVHVANHMIDEGLNHECKLCSQTFDSPAKLQCHLIEHSFEGMGGTFKCPV
CFTVFVQANKLQQHIFSAHGQEDKIYDCTQCPQKFFFQTELQNHTMTQHSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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