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Report for CCDS33005.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33005.1 Public Homo sapiens 19 ZFP30 24 110 108 CCDS HistoryNCBI Gene:22835Re-query CCDS DB by CCDS ID:33005.1Re-query CCDS DB by GeneID:22835See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33005.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000351218.6 ENSP00000343581.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000351218.6Link to Ensembl Protein Viewer:ENSP00000343581.1Re-query CCDS DB by Nucleotide ID:ENST00000351218Re-query CCDS DB by Protein ID:ENSP00000343581
Original member Current member EBI ENST00000514101.6 ENSP00000422930.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000514101.6Link to Ensembl Protein Viewer:ENSP00000422930.2Re-query CCDS DB by Nucleotide ID:ENST00000514101Re-query CCDS DB by Protein ID:ENSP00000422930
Original member Current member EBI ENST00000684514.1 ENSP00000508019.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000684514.1Link to Ensembl Protein Viewer:ENSP00000508019.1Re-query CCDS DB by Nucleotide ID:ENST00000684514Re-query CCDS DB by Protein ID:ENSP00000508019
Original member Current member NCBI NM_001320666.3 NP_001307595.1 Accepted alive Link to Nucleotide Sequence:NM_001320666.3Link to Protein Sequence:NP_001307595.1Re-query CCDS DB by Nucleotide ID:NM_001320666Re-query CCDS DB by Protein ID:NP_001307595Link to BLAST:NP_001307595.1
Original member Current member NCBI NM_001320667.3 NP_001307596.1 Accepted alive Link to Nucleotide Sequence:NM_001320667.3Link to Protein Sequence:NP_001307596.1Re-query CCDS DB by Nucleotide ID:NM_001320667Re-query CCDS DB by Protein ID:NP_001307596Link to BLAST:NP_001307596.1
Original member Current member NCBI NM_001320668.3 NP_001307597.1 Accepted alive Link to Nucleotide Sequence:NM_001320668.3Link to Protein Sequence:NP_001307597.1Re-query CCDS DB by Nucleotide ID:NM_001320668Re-query CCDS DB by Protein ID:NP_001307597Link to BLAST:NP_001307597.1
Original member Current member NCBI NM_001320669.3 NP_001307598.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001320669.3Link to Protein Sequence:NP_001307598.1Re-query CCDS DB by Nucleotide ID:NM_001320669Re-query CCDS DB by Protein ID:NP_001307598Link to BLAST:NP_001307598.1
Original member Current member NCBI NM_014898.4 NP_055713.1 Accepted alive Link to Nucleotide Sequence:NM_014898.4Link to Protein Sequence:NP_055713.1Re-query CCDS DB by Nucleotide ID:NM_014898Re-query CCDS DB by Protein ID:NP_055713Link to BLAST:NP_055713.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307595.1 519 Q9Y2G7 519 100% 0 0
NP_001307596.1 519 Q9Y2G7 519 100% 0 0
NP_001307597.1 519 Q9Y2G7 519 100% 0 0
NP_001307598.1 519 Q9Y2G7 519 100% 0 0
NP_055713.1 519 Q9Y2G7 519 100% 0 0

Chromosomal Locations for CCDS 33005.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37634981 37636305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37643265 37643363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37644610 37644736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37647814 37647822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1560 nt):
ATGGCTCGTGATTTGGTGATGTTCAGAGATGTGGCTGTAGACTTTTCTCAGGAAGAATGGGAATGCCTGA
ACTCATATCAGAGGAATTTGTACAGAGATGTGATATTAGAGAACTATAGCAACTTGGTGTCACTGGCAGG
ATGTTCTATTTCTAAGCCAGATGTGATCACCCTATTGGAACAAGGGAAAGAGCCCTGGATGGTTGTGAGG
GATGAGAAAAGAAGATGGACTCTAGATTTGGAATCCAGATATGACACTAAAAAGTTATTTCAAGGAAAGG
ATATTTATGAAATGAACTTATCTCAGTGGAAGGTAATGGAAAGAATTAAAAGCTGTGGACTTGAAGAACA
AGAAAGTCCTCATGAGGTGTGTTTCAGGCAAGTGACAAAAACCACCTCTGAAAAAATGCCTACTTACAGA
AAACTCACATCTCTTCCTCTGTATCAGAAAAGTCATAACAGAGAGAAACCCTACGAATGTGGGGAATGTG
GGAAGGCTTTTAGAGTACGACAACAACTTACTTTCCATCAAAGAATTCATACTGGTGAGAAACCCTATGA
ATGTAAAGAATGTGGAAAAGCCTTTAGACAGTGTGCCCACCTCAGTCGACATCAGAGAATTCATACTTCT
GACAAACTCTATGAATGTAAAAAATGTGGAAAGATCTTCACATGTGGCTCAGACCTTCGAGTACATCAGA
GAATTCATATTGGTGAGAAGCCGTATGAATGTAAAGAATGTGGGAAAGCCTTTAGAGTTAGAGGACAACT
TAATCTCCATCAAAGGATTCACACGGGTGAGAAACCCTATGAATGTAAAGAATGTGGGAAGGCCTTTAGG
CAGTATGCACACCTTACTCGACATCAGAGACTGAACATTGCTGAGAAGTGCTATGAGTGTAAGGAATGTG
GTCAGGCCTTTCTGTGTAGTACAGGCCTTCGACTACATCACAAACTTCATACTGGAGAAAAACCCTATGA
ATGTAAGGAGTGTGGAAAGGCCTTTAGAGTGCGGCAGCAACTTACTCTCCATCAGAGAATTCACACTGGT
GAGAAGCCTTATGATTGTAAGGAATGTGGGAAGACTTTCAGTCGTGGCTATCATCTAACTCTCCATCAGA
GAATACATACTGGTGAAAAGCCCTATGAATGTAAGGAATGTCAGAAGTTCTTTCGTCGTTACTCAGAACT
TATTTCACATCAGGGTATTCACATTGGAGAGAAACCTTATGAATGTAAGGAATGTGGGAAGGCATTTAGG
CTGTTCTCACAGCTTACTCAACATCAGAGTATTCATTTTGGTGAGAAACCCTTTAAGTGTAAGGAATGTG
AGAAGACTTTTAGACTGCTTTCACAACTTACCCAACATCAAAGTATTCATACTGGTGAAAAGCCCTATGA
CTGTAAGGAATGTGGAAAGGCCTTTAGACTTCATTCATCACTGATTCAACATCAGAGAATTCATTCTGGT
GAGAAACCATACAAATGTAAGGAATGTAAAAAGGCATTTAGACAACATTCACATCTTACTTACCATCAGC
GAATTCATAATGTAACTTAA

Translation (519 aa):
MARDLVMFRDVAVDFSQEEWECLNSYQRNLYRDVILENYSNLVSLAGCSISKPDVITLLEQGKEPWMVVR
DEKRRWTLDLESRYDTKKLFQGKDIYEMNLSQWKVMERIKSCGLEEQESPHEVCFRQVTKTTSEKMPTYR
KLTSLPLYQKSHNREKPYECGECGKAFRVRQQLTFHQRIHTGEKPYECKECGKAFRQCAHLSRHQRIHTS
DKLYECKKCGKIFTCGSDLRVHQRIHIGEKPYECKECGKAFRVRGQLNLHQRIHTGEKPYECKECGKAFR
QYAHLTRHQRLNIAEKCYECKECGQAFLCSTGLRLHHKLHTGEKPYECKECGKAFRVRQQLTLHQRIHTG
EKPYDCKECGKTFSRGYHLTLHQRIHTGEKPYECKECQKFFRRYSELISHQGIHIGEKPYECKECGKAFR
LFSQLTQHQSIHFGEKPFKCKECEKTFRLLSQLTQHQSIHTGEKPYDCKECGKAFRLHSSLIQHQRIHSG
EKPYKCKECKKAFRQHSHLTYHQRIHNVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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