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Report for CCDS33193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33193.1 Public Homo sapiens 2 TTC7A 24 110 108 CCDS HistoryNCBI Gene:57217Re-query CCDS DB by CCDS ID:33193.1Re-query CCDS DB by GeneID:57217See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33193.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319190.11 ENSP00000316699.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319190.11Link to Ensembl Protein Viewer:ENSP00000316699.5Re-query CCDS DB by Nucleotide ID:ENST00000319190Re-query CCDS DB by Protein ID:ENSP00000316699
Original member Current member NCBI NM_020458.4 NP_065191.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020458.4Link to Protein Sequence:NP_065191.2Re-query CCDS DB by Nucleotide ID:NM_020458Re-query CCDS DB by Protein ID:NP_065191Link to BLAST:NP_065191.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065191.2 858 Q9ULT0-1 858 100% 0 0

Chromosomal Locations for CCDS 33193.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 46941542 46941725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46950363 46950526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46956839 46957007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46974973 46975103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46978792 46978907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46993450 46993528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46994357 46994514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 46995136 46995199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47005922 47006059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47006641 47006724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47011331 47011435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47021862 47021979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47023408 47023465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47024287 47024359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47029224 47029384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47046315 47046431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47049949 47050046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47051746 47051880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47060769 47060971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47073702 47073923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2577 nt):
ATGGCTGCGAAGGGCGCGCACGGCTCCTACCTGAAGGTGGAGAGCGAGCTGGAGCGCTGCCGCGCCGAGG
GCCACTGGGACCGCATGCCGGAGCTGGTCCGGCAGCTGCAGACGCTGAGCATGCCCGGCGGCGGAGGTAA
CAGGCGAGGCAGCCCGAGCGCAGCGTTCACCTTTCCGGACACCGATGACTTTGGGAAATTGCTGCTGGCT
GAGGCCCTCCTGGAGCAGTGTTTGAAGGAGAACCATGCCAAAATAAAAGACTCCATGCCTTTGCTGGAGA
AGAATGAGCCGAAGATGAGCGAAGCCAAAAATTATCTAAGCAGTATCCTTAACCATGGGAGGCTCTCGCC
ACAGTACATGTGTGAGGCCATGCTGATCCTGGGCAAACTGCATTACGTGGAGGGCTCATACCGAGATGCC
ATCAGCATGTACGCACGGGCCGGGATTGATGACATGTCCATGGAGAACAAGCCCCTGTATCAGATGCGGC
TGCTGTCGGAGGCTTTTGTCATCAAAGGCCTCTCTCTGGAACGCCTACCCAACTCCATCGCCTCCCGCTT
CCGCCTGACAGAGAGGGAGGAGGAAGTGATCACCTGTTTTGAGAGGGCCTCCTGGATCGCTCAGGTGTTC
CTGCAGGAATTGGAGAAGACCACAAATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTTGACT
ATGAGCTCACCTACTTCCTGGAAGCTGCCCTCCAGAGCGCCTATGTGAAAAACCTGAAGAAGGGGAACAT
CGTGAAGGGCATGAGAGAGCTCCGGGAGGTGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACTTCAAA
GTGATGGCGGCCAAGCACCTGGCGGGGGTCCTGCTGCACTCCCTGAGTGAGGAGTGCTACTGGAGCCCCC
TGTCCCACCCTCTGCCTGAGTTCATGGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGCGGAAACC
TCACCTCTATGAAGGAGACAACCTCTACTGCCCCAAGGACAACATCGAGGAAGCCCTCCTGCTCCTCCTC
ATCAGCGAATCCATGGCAACTCGAGATGTGGTGCTGAGCCGGGTGCCGGAGCAGGAGGAGGACCGGACAG
TGAGCTTGCAGAATGCCGCAGCCATCTATGACCTCCTGAGCATCACGTTGGGCAGAAGGGGACAGTACGT
CATGCTCTCGGAGTGCCTGGAGCGAGCCATGAAGTTTGCGTTTGGAGAATTTCACCTTTGGTACCAGGTG
GCCCTCTCCATGGTGGCTTGTGGGAAGTCAGCCTACGCTGTGTCCCTGCTGCGGGAGTGTGTGAAGTTGC
GGCCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTGCATCGGGTCCCTTCGCTGGCTAGAGGA
AGCAGAGCACTTTGCCATGATGGTGATCAGCCTCGGAGAGGAAGCCGGGGAGTTCCTCCCCAAGGGCTAC
CTGGCTCTGGGTCTCACCTATAGCCTGCAGGCCACCGACGCCACCCTGAAGTCCAAGCAAGATGAATTGC
ACCGGAAGGCACTGCAGACGCTGGAGAGGGCTCAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCCTCTA
TGTCTCGCTGCAGCTGGCCCTCGTCCGACAGATCTCCAGTGCCATGGAGCAGCTGCAGGAGGCCCTGAAG
GTACGCAAGGATGATGCCCACGCCCTCCACCTGCTGGCACTGCTCTTCTCTGCCCAGAAGCACCACCAGC
ATGCCCTGGATGTTGTCAACATGGCCATCACCGAGCACCCTGAGAACTTCAACCTGATGTTCACCAAGGT
GAAGCTGGAGCAGGTGCTGAAAGGCCCAGAGGAAGCCCTCGTGACCTGCAGACAAGTGCTGAGGCTGTGG
CAGACCCTGTACAGCTTCTCCCAGCTGGGAGGCCTAGAAAAGGATGGCAGCTTCGGTGAGGGCCTCACCA
TGAAGAAGCAGAGTGGCATGCACCTGACTTTGCCTGATGCCCATGATGCAGACTCTGGCTCCCGGCGGGC
TTCGTCCATCGCCGCCTCCCGGCTGGAGGAGGCCATGTCAGAGCTGACTATGCCCTCTTCGGTCCTGAAG
CAGGGCCCCATGCAGCTGTGGACCACGCTGGAACAGATCTGGCTGCAGGCTGCTGAGCTGTTCATGGAGC
AGCAGCACCTCAAGGAAGCAGGTTTCTGCATCCAGGAGGCGGCGGGCCTCTTCCCCACTTCTCACTCAGT
ACTCTATATGCGGGGCCGGCTGGCTGAGGTGAAGGGCAACCTGGAGGAGGCCAAGCAGCTGTACAAGGAG
GCGCTCACGGTGAACCCAGATGGCGTGCGCATCATGCATAGCCTGGGTCTGATGCTGAGTCGGCTGGGCC
ACAAGAGCTTGGCCCAGAAGGTGCTTCGTGATGCCGTGGAGAGGCAGAGTACGTGCCACGAGGCGTGGCA
GGGCCTGGGCGAGGTGCTGCAGGCCCAGGGCCAGAACGAGGCTGCCGTTGACTGCTTCCTCACCGCCCTT
GAGCTGGAGGCCAGCAGCCCTGTACTGCCCTTCTCCATCATCCCCAGAGAGCTCTGA

Translation (858 aa):
MAAKGAHGSYLKVESELERCRAEGHWDRMPELVRQLQTLSMPGGGGNRRGSPSAAFTFPDTDDFGKLLLA
EALLEQCLKENHAKIKDSMPLLEKNEPKMSEAKNYLSSILNHGRLSPQYMCEAMLILGKLHYVEGSYRDA
ISMYARAGIDDMSMENKPLYQMRLLSEAFVIKGLSLERLPNSIASRFRLTEREEEVITCFERASWIAQVF
LQELEKTTNNSTSRHLKGCHPLDYELTYFLEAALQSAYVKNLKKGNIVKGMRELREVLRTVETKATQNFK
VMAAKHLAGVLLHSLSEECYWSPLSHPLPEFMGKEESSFATQALRKPHLYEGDNLYCPKDNIEEALLLLL
ISESMATRDVVLSRVPEQEEDRTVSLQNAAAIYDLLSITLGRRGQYVMLSECLERAMKFAFGEFHLWYQV
ALSMVACGKSAYAVSLLRECVKLRPSDPTVPLMAAKVCIGSLRWLEEAEHFAMMVISLGEEAGEFLPKGY
LALGLTYSLQATDATLKSKQDELHRKALQTLERAQQLAPSDPQVILYVSLQLALVRQISSAMEQLQEALK
VRKDDAHALHLLALLFSAQKHHQHALDVVNMAITEHPENFNLMFTKVKLEQVLKGPEEALVTCRQVLRLW
QTLYSFSQLGGLEKDGSFGEGLTMKKQSGMHLTLPDAHDADSGSRRASSIAASRLEEAMSELTMPSSVLK
QGPMQLWTTLEQIWLQAAELFMEQQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYKE
ALTVNPDGVRIMHSLGLMLSRLGHKSLAQKVLRDAVERQSTCHEAWQGLGEVLQAQGQNEAAVDCFLTAL
ELEASSPVLPFSIIPREL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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