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Report for CCDS33370.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33370.1 Public Homo sapiens 2 KANSL1L 24 110 108 CCDS HistoryNCBI Gene:151050Re-query CCDS DB by CCDS ID:33370.1Re-query CCDS DB by GeneID:151050See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33370.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281772.14 ENSP00000281772.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000281772.14Link to Ensembl Protein Viewer:ENSP00000281772.8Re-query CCDS DB by Nucleotide ID:ENST00000281772Re-query CCDS DB by Protein ID:ENSP00000281772
Original member Current member NCBI NM_152519.4 NP_689732.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152519.4Link to Protein Sequence:NP_689732.2Re-query CCDS DB by Nucleotide ID:NM_152519Re-query CCDS DB by Protein ID:NP_689732Link to BLAST:NP_689732.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689732.2 987 A0AUZ9-1 987 100% 0 0

Chromosomal Locations for CCDS 33370.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 210022949 210023179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210024033 210024201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210025104 210025216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210027296 210027350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210028845 210028969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210029803 210029918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210031421 210031546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210040420 210040527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210043939 210044104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210075552 210075756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210098086 210098207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210104104 210104301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210129031 210129172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 210153495 210154582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2964 nt):
ATGACCCCAGCTCTGAGGGAGGCAACAGCAAAGGGTATCAGCTTTTCATCTTTGCCAAGTACCATGGAGT
CTGACAAGATGCTCTACATGGAAAGTCCCAGAACTGTAGATGAAAAGCTAAAGGGAGACACCTTTTCTCA
GATGCTTGGATTTCCAACTCCTGAACCTACTCTTAATACTAATTTTGTGAATTTAAAACATTTTGGCTCC
CCTCAGTCTTCAAAACATTACCAGACTGTTTTTTTAATGAGATCTAATTCTACATTAAATAAACACAATG
AGAATTATAAACAAAAGAAATTAGGGGAGCCCAGTTGCAATAAGCTGAAAAACATACTGTATAATGGCAG
CAACATTCAGCTCAGTAAAATCTGTCTTTCTCATTCTGAAGAGTTCATCAAAAAGGAGCCTCTATCAGAT
ACCACGAGCCAGTGCATGAAAGATGTACAAATTATTCTGGATTCAAATATAACCAAAGACACTAATGTAG
ATAAAGTACAACTACAAAACTGTAAATGGTATCAAGAGAATGCACTTTTGGATAAAGTTACTGATGCTGA
GATTAAAAAGGGTTTATTGCACTGTACTCAAAAGAAAATTGTACCTGGCCACTCAAATGTGCCTGTTAGT
TCTTCAGCTGCTGAAAAAGAGGAGGAAGTACATGCTCGTTTACTTCATTGTGTAAGCAAACAGAAAATTT
TACTTAGCCAGGCTAGAAGAACTCAGAAACATTTGCAGATGCTCCTGGCAAAGCATGTTGTTAAGCACTA
TGGTCAGCAGATGAAATTGTCTATGAAACATCAACTCCCCAAAATGAAGACATTTCATGAACCTACCACA
ATTTTGGGTAATAGTTTACCTAAATGCACTGAAATTAAGCCAGAAGTTAACACATTGACTGCAGAGAATA
AATTGTGGGATGATGCAAAAAATGGCTTTGCACGGTGTACAGCTGCGGAAATCCAAAGATTTGCATTTTC
TGCTACAGGGCTGTTGTCTCATGTTGAAGAGGGTTTGGATTCCGATGCAACTGATAGCAGCTCTGATGAC
GATTTGGATGAATATACCCTTAGAAAAAATGTGGCAGTTAACTGTAGTACTGAATGGAAGTGGCTTGTAG
ACAGAGCACGAGTTGGCAGCCGATGGACTTGGCTTCAAGCTCAGATTTCAGACCTAGAATGCAAAATCCA
ACAACTAACAGACATTCACAGGCAAATTCGTGCCTCCAAGGGGATAGTGGTCCTAGAAGAATGTCAGCTT
CCAAAAGATATTTTGAAAAAACAAATGCAATTTGCAGACCAAGCAGCTTCACTAAACATTCTAGGGAATC
CTCAGGTTCCCCAGGAGTGTCAAGATCCTGTACCGGAACAAGATTTTGAAATGTCACCAAGCAGCCCTAC
TTTACTTCTTCGAAACATCGAAAAACAGAGTGCACAGTTGACTGAGATCATCAACAGTTTGATTGCCCCT
CTCAACTTGTCCCCAACTTCATCACCCCTCTCTTCCAAATCCTGTAGCCATAAATGTCTGGCTAATGGCA
TTTACAGGAGTGCATCAGAGAATTTAGATGAGCTGTCTTCCTCCAGTAGCTGGTTACTTAACCAGAAGCA
CAGTAAGAAAAAGAGAAAAGACAGGACAAGACTGAAATCTTCATCCTTGACTTTCATGAGTACATCAGCC
CGAACAAGGCCACTTCAGAGTTTCCACAAACGAAAACTGTACAGATTGAGCCCTACTTTTTATTGGACTC
CACAGACTTTGCCTTCAAAAGAAACAGCATTTTTAAACACTACACAAATGCCTTGCCTGCAATCAGCTTC
AACTTGGAGTAGCTATGAACACAATTCGGAGTCTTACCTATTAAGAGAACATGTATCAGAGTTAGATTCC
TCTTTCCATTCTGTTCTATCATTGCCATCAGATGTGCCTCTTCATTTTCACTTTGAAACACTGTTAAAAA
AGACTGAAATAAAAGGCAATCTTGCTGAAAATAAATTTGTAGATGAATATATCATATCTCCATCACCTGT
ACATAGTACTCTGAATCAATGGAGAAATGGATATTCACCTATATGTAAGCCTCAAATAAGGTCAGAATCT
TCTGCACAACTGTTACAGGGAAGAAAGAAAAGACATTTGAGTGAAACAGCATTAGGAGAAAGAACTAAAC
TTGAAGAATCTGATTTTCAACACACAGAATCAGGATCCCATAGCAATTTTACTGCTGTTTCCAATGTCAA
CGTTTTATCAAGAATCCAGAATTCATCACGAAATACTGCACGACGGAGATTGAGAAGTGAGAGCTCTTAT
GACATAGATAACATTGTGATTCCCATGTCATTAGTAGCCCCAGCTAAATTAGAGAAACTCCAATATAAGG
AAATACTTACTCCAAGCTGGAGGATGGTTGTTCTTCAGCCTTTGGATGAATATAATTTAGGCAAAGAAGA
GATAGAAGATCTTTCTGATGAAGTCTTCTCCCTAAGGCACAAAAAATATGAAGAGAGAGAGCAAGCCAGG
TGGTCACTATGGGAGCAAAGCAAGTGGCACAGAAGAAACAGCAGAGCTTACAGTAAAAATGTTGAAGGAC
AGGACTTGCTTTTGAAAGAATACCCTAATAACTTCAGTAGCAGTCAGCAATGTGCTGCTGCAAGTCCTCC
TGGGCTTCCTTCAGAGAACCAGGATCTGTGTGCATATGGCTTACCTTCTTTAAATCAAAGTCAAGAAACC
AAGTCTTTGTGGTGGGAACGACGGGCTTTTCCACTGAAGGGTGAAGACATGGCAGCCTTATTATGTCAAG
ATGAAAAAAAGGATCAGGTTGAAAGGTCAAGCACAGCTTTCCATGGTGAAATCTTCGGTACCAGTGTACC
AGAGAATGGCCACCATCCAAAAAAGCAGTCAGATGGAATGGAAGAATACAAAACCTTTGGTCTAGGACTT
ACTAATGTTAAAAAAAATAGGTGA

Translation (987 aa):
MTPALREATAKGISFSSLPSTMESDKMLYMESPRTVDEKLKGDTFSQMLGFPTPEPTLNTNFVNLKHFGS
PQSSKHYQTVFLMRSNSTLNKHNENYKQKKLGEPSCNKLKNILYNGSNIQLSKICLSHSEEFIKKEPLSD
TTSQCMKDVQIILDSNITKDTNVDKVQLQNCKWYQENALLDKVTDAEIKKGLLHCTQKKIVPGHSNVPVS
SSAAEKEEEVHARLLHCVSKQKILLSQARRTQKHLQMLLAKHVVKHYGQQMKLSMKHQLPKMKTFHEPTT
ILGNSLPKCTEIKPEVNTLTAENKLWDDAKNGFARCTAAEIQRFAFSATGLLSHVEEGLDSDATDSSSDD
DLDEYTLRKNVAVNCSTEWKWLVDRARVGSRWTWLQAQISDLECKIQQLTDIHRQIRASKGIVVLEECQL
PKDILKKQMQFADQAASLNILGNPQVPQECQDPVPEQDFEMSPSSPTLLLRNIEKQSAQLTEIINSLIAP
LNLSPTSSPLSSKSCSHKCLANGIYRSASENLDELSSSSSWLLNQKHSKKKRKDRTRLKSSSLTFMSTSA
RTRPLQSFHKRKLYRLSPTFYWTPQTLPSKETAFLNTTQMPCLQSASTWSSYEHNSESYLLREHVSELDS
SFHSVLSLPSDVPLHFHFETLLKKTEIKGNLAENKFVDEYIISPSPVHSTLNQWRNGYSPICKPQIRSES
SAQLLQGRKKRHLSETALGERTKLEESDFQHTESGSHSNFTAVSNVNVLSRIQNSSRNTARRRLRSESSY
DIDNIVIPMSLVAPAKLEKLQYKEILTPSWRMVVLQPLDEYNLGKEEIEDLSDEVFSLRHKKYEEREQAR
WSLWEQSKWHRRNSRAYSKNVEGQDLLLKEYPNNFSSSQQCAAASPPGLPSENQDLCAYGLPSLNQSQET
KSLWWERRAFPLKGEDMAALLCQDEKKDQVERSSTAFHGEIFGTSVPENGHHPKKQSDGMEEYKTFGLGL
TNVKKNR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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