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Report for CCDS3383.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3383.1 Public Homo sapiens 4 EVC 24 110 108 CCDS HistoryNCBI Gene:2121Re-query CCDS DB by CCDS ID:3383.1Re-query CCDS DB by GeneID:2121See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3383.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264956.11 ENSP00000264956.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264956.11Link to Ensembl Protein Viewer:ENSP00000264956.6Re-query CCDS DB by Nucleotide ID:ENST00000264956Re-query CCDS DB by Protein ID:ENSP00000264956
Original member Current member NCBI NM_153717.3 NP_714928.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153717.3Link to Protein Sequence:NP_714928.1Re-query CCDS DB by Nucleotide ID:NM_153717Re-query CCDS DB by Protein ID:NP_714928Link to BLAST:NP_714928.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_714928.1 992 P57679 992 100% 0 0

Chromosomal Locations for CCDS 3383.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 5711381 5711554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5719248 5719373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5729307 5729390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5731425 5731657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5733351 5733435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5741716 5741814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5745204 5745341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5748148 5748306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5752836 5753052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5753785 5753933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5756264 5756362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5783552 5783764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5793608 5793717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5797022 5797232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5798586 5798792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5801950 5802094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5804730 5804841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5808201 5808327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5809518 5809611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5810339 5810450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5810953 5811037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2979 nt):
ATGGCCCGCGGCGGGGCGGCCTGCAAGAGCGACGCGCGGCTGCTGCTGGGGCGGGACGCGCTGCGGCCGG
CGCCCGCCCTGCTGGCCCCCGCCGTGCTGCTGGGCGCCGCGCTCGGCCTCGGCCTCGGCCTTTGGCTTGG
CTGCCGCGCGGGCCGCCAGCGCACGCGACACCAGAAAGACGACACTCAAAATCTGCTCAAGAATTTGGAG
TCTAATGCGCAGACCCCCTCGGAAACTGGCTCCCCATCAAGGAGGAGGAAGAGAGAAGTGCAGATGTCGA
AGGACAAGGAAGCTGTTGATGAATGTGAGCCGCCTTCCAACAGCAATATCACAGCATTCGCCCTGAAGGC
CAAAGTCATCTACCCCATCAATCAGAAGTTCCGGCCTCTGGCCGATGGCTCCTCCAACCCGTCTCTGCAT
GAAAACTTAAAGCAGGCTGTTTTGCCACACCAGCCGGTAGAGGCCTCTCCTTCCAGCAGTCTGGGGAGCC
TGAGCCAGGGTGAGAAGGACGACTGCAGCTCCTCATCCAGCGTCCACTCGGCCACCAGCGATGACAGGTT
TCTCAGCCGCACCTTCCTCCGGGTGAACGCCTTCCCTGAAGTGCTGGCCTGCGAGAGTGTAGACGTTGAC
CTGTGTATCTACAGCCTTCACTTAAAAGACCTGCTGCATTTGGACACGGCACTGAGGCAGGAAAAGCATA
TGATGTTTATTCAGATTTTTAAAATGTGCCTCCTTGACCTTCTTCCTAAAAAGAAGTCAGATGATGAACT
ATACCAGAAGATCCTTTCAAAACAAGAAAAAGATTTGGAGGAACTAGAAAAGGGACTTCAGGTCAAACTG
TCAAACACAGAAATGTCGGGGGCTGGTGACTCTGAGTACATCACCCTGGCTGATGTGGAAAAGAAGGAGA
GAGAATACTCTGAACAGCTAATCGATAATATGGAAGCTTTCTGGAAACAGATGGCAAATATCCAGCACTT
TCTTGTGGACCAGTTTAAGTGTTCCAGCTCCAAAGCCCGACAGCTGATGATGACTCTGACGGAAAGAATG
ATTGCAGCCGAAGGGCTATTGTGCGATTCTCAGGAGCTGCAGGCTCTGGACGCCCTGGAGAGGACGATGG
GGCGGGCGCACATGGCAAAAGTGATTGAGTTTCTGAAGCTGCAAGTCCAGGAGGAGACCAGGTGCCGGCT
GGCTGCCATCTCCCACGGCCTGGAGCTGCTGGCTGGTGAGGGGAAGCTGTCCGGGCGGCAGAAGGAGGAG
CTGCTCACGCAGCAGCACAAGGCCTTCTGGCAGGAGGCAGAGCGCTTCAGCCGGGAGTTTGTCCAGCGAG
GCAAAGACCTGGTCACGGCGTCTCTGGCTCACCAGGTGGAGGGAACGGCAAAACTCACGCTGGCCCAAGA
GGAGGAACAGAGAAGCTTCCTGGCTGAGGCCCAGCCGACTGCTGACCCGGAAAAGTTTCTCGAGGCTTTT
CATGAGGTCCTGGAGAGGCAGAGGCTGATGCAGTGTGACCTGGAGGAAGAGGAGAATGTCAGAGCCACCG
AGGCTGTGGTTGCACTCTGCCAGGAGCTGTACTTCAGCACCGTGGACACTTTCCAGAAGTTCGTGGATGC
CCTGTTCCTTCAGACGCTCCCTGGCATGACTGGCCTCCCCCCGGAAGAGTGTGACTACTTGAGGCAGGAA
GTCCAGGAGAACGCTGCCTGGCAGCTGGGGAAGTCAAATCGCTTCCGGAGGCAGCAGTGGAAACTCTTCC
AGGAGCTCCTAGAGCAAGACCAGCAGGTGTGGATGGAGGAGTGTGCGCTGTCCAGCGTGCTGCAGACACA
CCTGCGGGAGGACCACGAGGGCACCATCCGCGGCGTCTTGGGCCGACTGGGCGGCCTCACTGAAGAGTCC
ACGCGGTGTGTCCTGCAGGGGCATGACCTGCTGTTGCGCTCAGCCCTCCGGAGGCTGGCACTCCGCGGCA
ACGCCCTGGCCACCCTGACGCAGATGCGGCTATCGGGGAAGAAGCACCTCCTGCAGGAGCTGCGGGAACA
GCGTGCACTGGAGCAGGGGTCCTCCCAGTGCCTGGACGAGCATCAGTGGCAGCTGCTCAGGGCCCTGGAG
GCGCGTGTGCTGGAGGAGGCCAGCCGGCTAGAGGAGGAAGCACAGCAGACACGGCTGCAGCTCCAGCAGC
GGCTCCTGGCCGAGGCCCAGGAGGTGGGGCAGCTTCTGCAGCAGCACATGGAGTGCGCCATTGGGCAGGC
GCTGCTGGTGCATGCACGGAATGCAGCCACCAAGAGCCGGGCCAAGGACAGGGATGACTTCAAGAGGACA
CTGATGGAGGCGGCAGTGGAGAGCGTCTACGTGACCAGCGCTGGTGTCAGCCGCCTGGTGCAGGCGTATT
ACCAGCAAATCGGAAGGATCATGGAGGACCACGAGGAGAGAAAACTGCAGCACCTGAAGACCCTGCAGGG
TGAGAGGATGGAAAATTACAAACTGCGGAAAAAGCAAGAACTCAGCAACCCTTCGTCGGGCAGCAGGACG
GCAGGTGGCGCTCATGAGACCTCCCAGGCGGTCCACCAGAGGATGCTGTCCCAGCAGAAGAGGTTCCTGG
CCCAGTTCCCAGTGCACCAGCAGATGCGTCTGCACGCCCAGCAGCAGCAGGCAGGAGTCATGGACCTTCT
GGAAGCCCAGCTGGAGACCCAGCTACAGGAAGCTGAACAGAACTTCATCTCCGAGCTGGCAGCCTTGGCC
CGAGTGCCCCTTGCTGAAAGCAAACTGTTGCCTGCTAAGCGTGGGCTGCTAGAGAAGCCCCTAAGGACTA
AAAGGAAGAAGCCCCTGCCCCAGGAAAGAGGGGACCTGGGGGTGCCCAACAATGAGGACCTTGCCTCCGG
GGACCAGACCTCAGGCTCACTCAGCAGCAAAAGGCTGAGTCAGCAAGAAAGTGAAGCTGGGGACAGTGGG
AACTCAAAGAAGATGCTAAAGAGAAGAAGCAACTTGTAG

Translation (992 aa):
MARGGAACKSDARLLLGRDALRPAPALLAPAVLLGAALGLGLGLWLGCRAGRQRTRHQKDDTQNLLKNLE
SNAQTPSETGSPSRRRKREVQMSKDKEAVDECEPPSNSNITAFALKAKVIYPINQKFRPLADGSSNPSLH
ENLKQAVLPHQPVEASPSSSLGSLSQGEKDDCSSSSSVHSATSDDRFLSRTFLRVNAFPEVLACESVDVD
LCIYSLHLKDLLHLDTALRQEKHMMFIQIFKMCLLDLLPKKKSDDELYQKILSKQEKDLEELEKGLQVKL
SNTEMSGAGDSEYITLADVEKKEREYSEQLIDNMEAFWKQMANIQHFLVDQFKCSSSKARQLMMTLTERM
IAAEGLLCDSQELQALDALERTMGRAHMAKVIEFLKLQVQEETRCRLAAISHGLELLAGEGKLSGRQKEE
LLTQQHKAFWQEAERFSREFVQRGKDLVTASLAHQVEGTAKLTLAQEEEQRSFLAEAQPTADPEKFLEAF
HEVLERQRLMQCDLEEEENVRATEAVVALCQELYFSTVDTFQKFVDALFLQTLPGMTGLPPEECDYLRQE
VQENAAWQLGKSNRFRRQQWKLFQELLEQDQQVWMEECALSSVLQTHLREDHEGTIRGVLGRLGGLTEES
TRCVLQGHDLLLRSALRRLALRGNALATLTQMRLSGKKHLLQELREQRALEQGSSQCLDEHQWQLLRALE
ARVLEEASRLEEEAQQTRLQLQQRLLAEAQEVGQLLQQHMECAIGQALLVHARNAATKSRAKDRDDFKRT
LMEAAVESVYVTSAGVSRLVQAYYQQIGRIMEDHEERKLQHLKTLQGERMENYKLRKKQELSNPSSGSRT
AGGAHETSQAVHQRMLSQQKRFLAQFPVHQQMRLHAQQQQAGVMDLLEAQLETQLQEAEQNFISELAALA
RVPLAESKLLPAKRGLLEKPLRTKRKKPLPQERGDLGVPNNEDLASGDQTSGSLSSKRLSQQESEAGDSG
NSKKMLKRRSNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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