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Report for CCDS34.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34.1 Public Homo sapiens 1 GNB1 24 110 108 CCDS HistoryNCBI Gene:2782Re-query CCDS DB by CCDS ID:34.1Re-query CCDS DB by GeneID:2782See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378609.9 ENSP00000367872.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378609.9Link to Ensembl Protein Viewer:ENSP00000367872.3Re-query CCDS DB by Nucleotide ID:ENST00000378609Re-query CCDS DB by Protein ID:ENSP00000367872
Original member Current member EBI ENST00000610897.4 ENSP00000481878.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610897.4Link to Ensembl Protein Viewer:ENSP00000481878.1Re-query CCDS DB by Nucleotide ID:ENST00000610897Re-query CCDS DB by Protein ID:ENSP00000481878
Original member Current member EBI ENST00000703692.1 ENSP00000515427.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703692.1Link to Ensembl Protein Viewer:ENSP00000515427.1Re-query CCDS DB by Nucleotide ID:ENST00000703692Re-query CCDS DB by Protein ID:ENSP00000515427
Original member Current member EBI ENST00000703693.1 ENSP00000515428.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703693.1Link to Ensembl Protein Viewer:ENSP00000515428.1Re-query CCDS DB by Nucleotide ID:ENST00000703693Re-query CCDS DB by Protein ID:ENSP00000515428
Original member Current member EBI ENST00000703694.1 ENSP00000515429.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703694.1Link to Ensembl Protein Viewer:ENSP00000515429.1Re-query CCDS DB by Nucleotide ID:ENST00000703694Re-query CCDS DB by Protein ID:ENSP00000515429
Original member Current member EBI ENST00000703696.1 ENSP00000515431.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703696.1Link to Ensembl Protein Viewer:ENSP00000515431.1Re-query CCDS DB by Nucleotide ID:ENST00000703696Re-query CCDS DB by Protein ID:ENSP00000515431
Original member Current member EBI ENST00000703697.1 ENSP00000515432.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703697.1Link to Ensembl Protein Viewer:ENSP00000515432.1Re-query CCDS DB by Nucleotide ID:ENST00000703697Re-query CCDS DB by Protein ID:ENSP00000515432
Original member Current member EBI ENST00000703699.1 ENSP00000515433.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703699.1Link to Ensembl Protein Viewer:ENSP00000515433.1Re-query CCDS DB by Nucleotide ID:ENST00000703699Re-query CCDS DB by Protein ID:ENSP00000515433
Original member Current member EBI ENST00000703700.1 ENSP00000515434.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703700.1Link to Ensembl Protein Viewer:ENSP00000515434.1Re-query CCDS DB by Nucleotide ID:ENST00000703700Re-query CCDS DB by Protein ID:ENSP00000515434
Original member Current member EBI ENST00000703701.1 ENSP00000515435.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703701.1Link to Ensembl Protein Viewer:ENSP00000515435.1Re-query CCDS DB by Nucleotide ID:ENST00000703701Re-query CCDS DB by Protein ID:ENSP00000515435
Original member Current member EBI ENST00000703702.1 ENSP00000515436.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703702.1Link to Ensembl Protein Viewer:ENSP00000515436.1Re-query CCDS DB by Nucleotide ID:ENST00000703702Re-query CCDS DB by Protein ID:ENSP00000515436
Original member Current member EBI ENST00000703703.1 ENSP00000515437.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703703.1Link to Ensembl Protein Viewer:ENSP00000515437.1Re-query CCDS DB by Nucleotide ID:ENST00000703703Re-query CCDS DB by Protein ID:ENSP00000515437
Original member Current member EBI ENST00000703704.1 ENSP00000515438.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703704.1Link to Ensembl Protein Viewer:ENSP00000515438.1Re-query CCDS DB by Nucleotide ID:ENST00000703704Re-query CCDS DB by Protein ID:ENSP00000515438
Original member Current member EBI ENST00000703706.1 ENSP00000515440.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703706.1Link to Ensembl Protein Viewer:ENSP00000515440.1Re-query CCDS DB by Nucleotide ID:ENST00000703706Re-query CCDS DB by Protein ID:ENSP00000515440
Original member Current member EBI ENST00000703708.1 ENSP00000515442.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703708.1Link to Ensembl Protein Viewer:ENSP00000515442.1Re-query CCDS DB by Nucleotide ID:ENST00000703708Re-query CCDS DB by Protein ID:ENSP00000515442
Original member Current member EBI ENST00000703709.1 ENSP00000515443.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703709.1Link to Ensembl Protein Viewer:ENSP00000515443.1Re-query CCDS DB by Nucleotide ID:ENST00000703709Re-query CCDS DB by Protein ID:ENSP00000515443
Original member Current member EBI ENST00000703710.1 ENSP00000515444.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703710.1Link to Ensembl Protein Viewer:ENSP00000515444.1Re-query CCDS DB by Nucleotide ID:ENST00000703710Re-query CCDS DB by Protein ID:ENSP00000515444
Original member Current member EBI ENST00000703711.1 ENSP00000515445.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000703711.1Link to Ensembl Protein Viewer:ENSP00000515445.1Re-query CCDS DB by Nucleotide ID:ENST00000703711Re-query CCDS DB by Protein ID:ENSP00000515445
Original member Current member NCBI NM_001282539.2 NP_001269468.1 Accepted alive Link to Nucleotide Sequence:NM_001282539.2Link to Protein Sequence:NP_001269468.1Re-query CCDS DB by Nucleotide ID:NM_001282539Re-query CCDS DB by Protein ID:NP_001269468Link to BLAST:NP_001269468.1
Original member Current member NCBI NM_002074.5 NP_002065.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002074.5Link to Protein Sequence:NP_002065.1Re-query CCDS DB by Nucleotide ID:NM_002074Re-query CCDS DB by Protein ID:NP_002065Link to BLAST:NP_002065.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269468.1 340 P62873-1 340 100% 0 0
NP_002065.1 340 P62873-1 340 100% 0 0

Chromosomal Locations for CCDS 34.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 1787331 1787437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1789053 1789269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1790395 1790596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1793245 1793311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1804419 1804581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1806475 1806538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1815756 1815862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1817837 1817875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1825397 1825453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1023 nt):
ATGAGTGAGCTTGACCAGTTACGGCAGGAGGCCGAGCAACTTAAGAACCAGATTCGAGACGCCAGGAAAG
CATGTGCAGATGCAACTCTCTCTCAGATCACAAACAACATCGACCCAGTGGGAAGAATCCAAATGCGCAC
GAGGAGGACACTGCGGGGGCACCTGGCCAAGATCTACGCCATGCACTGGGGCACAGACTCCAGGCTTCTC
GTCAGTGCCTCGCAGGATGGTAAACTTATCATCTGGGACAGCTACACCACCAACAAGGTCCACGCCATCC
CTCTGCGCTCCTCCTGGGTCATGACCTGTGCATATGCCCCTTCTGGGAACTATGTGGCCTGCGGTGGCCT
GGATAACATTTGCTCCATTTACAATCTGAAAACTCGTGAGGGGAACGTGCGCGTGAGTCGTGAGCTGGCA
GGACACACAGGTTACCTGTCCTGCTGCCGATTCCTGGATGACAATCAGATCGTCACCAGCTCTGGAGACA
CCACGTGTGCCCTGTGGGACATCGAGACCGGCCAGCAGACGACCACGTTTACCGGACACACTGGAGATGT
CATGAGCCTTTCTCTTGCTCCTGACACCAGACTGTTCGTCTCTGGTGCTTGTGATGCTTCAGCCAAACTC
TGGGATGTGCGAGAAGGCATGTGCCGGCAGACCTTCACTGGCCACGAGTCTGACATCAATGCCATTTGCT
TCTTTCCAAATGGCAATGCATTTGCCACTGGCTCAGACGACGCCACCTGCAGGCTGTTTGACCTTCGTGC
TGACCAGGAGCTCATGACTTACTCCCATGACAACATCATCTGCGGGATCACCTCTGTCTCCTTCTCCAAG
AGCGGGCGCCTCCTCCTTGCTGGGTACGACGACTTCAACTGCAACGTCTGGGATGCACTCAAAGCCGACC
GGGCAGGTGTCTTGGCTGGGCATGACAACCGCGTCAGCTGCCTGGGCGTGACTGACGATGGCATGGCTGT
GGCGACAGGGTCCTGGGATAGCTTCCTCAAGATCTGGAACTAA

Translation (340 aa):
MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLL
VSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA
GHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL
WDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK
SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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