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Report for CCDS34069.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34069.1 Public Homo sapiens 4 GYPA 24 110 108 CCDS HistoryNCBI Gene:2993Re-query CCDS DB by CCDS ID:34069.1Re-query CCDS DB by GeneID:2993See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34069.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360771.8 ENSP00000354003.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360771.8Link to Ensembl Protein Viewer:ENSP00000354003.4Re-query CCDS DB by Nucleotide ID:ENST00000360771Re-query CCDS DB by Protein ID:ENSP00000354003
Original member Current member EBI ENST00000641688.3 ENSP00000493142.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641688.3Link to Ensembl Protein Viewer:ENSP00000493142.2Re-query CCDS DB by Nucleotide ID:ENST00000641688Re-query CCDS DB by Protein ID:ENSP00000493142
Original member Current member NCBI NM_002099.8 NP_002090.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002099.8Link to Protein Sequence:NP_002090.4Re-query CCDS DB by Nucleotide ID:NM_002099Re-query CCDS DB by Protein ID:NP_002090Link to BLAST:NP_002090.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002090.4 150 P02724-1 150 98.6667% 0 2

Chromosomal Locations for CCDS 34069.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 144111394 144111410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144114689 144114767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144116854 144116939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144118714 144118752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144119686 144119781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144120490 144120588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144140599 144140635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGTATGGAAAAATAATCTTTGTATTACTATTGTCAGAAATTGTGAGCATATCAGCATTAAGTACCACTG
AGGTGGCAATGCACACTTCAACTTCTTCTTCAGTCACAAAGAGTTACATCTCATCACAGACAAATGATAC
GCACAAACGGGACACATATGCAGCCACTCCTAGAGCTCATGAAGTTTCAGAAATTTCTGTTAGAACTGTT
TACCCTCCAGAAGAGGAAACCGGAGAAAGGGTACAACTTGCCCATCATTTCTCTGAACCAGAGATAACAC
TCATTATTTTTGGGGTGATGGCTGGTGTTATTGGAACGATCCTCTTAATTTCTTACGGTATTCGCCGACT
GATAAAGAAAAGCCCATCTGATGTAAAACCTCTCCCCTCACCTGACACAGACGTGCCTTTAAGTTCTGTT
GAAATAGAAAATCCAGAGACAAGTGATCAATGA

Translation (150 aa):
MYGKIIFVLLLSEIVSISALSTTEVAMHTSTSSSVTKSYISSQTNDTHKRDTYAATPRAHEVSEISVRTV
YPPEEETGERVQLAHHFSEPEITLIIFGVMAGVIGTILLISYGIRRLIKKSPSDVKPLPSPDTDVPLSSV
EIENPETSDQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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