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Report for CCDS34561.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34561.1 Public Homo sapiens 6 TULP4 24 110 108 CCDS HistoryNCBI Gene:56995Re-query CCDS DB by CCDS ID:34561.1Re-query CCDS DB by GeneID:56995See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34561.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367097.8 ENSP00000356064.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367097.8Link to Ensembl Protein Viewer:ENSP00000356064.3Re-query CCDS DB by Nucleotide ID:ENST00000367097Re-query CCDS DB by Protein ID:ENSP00000356064
Original member Current member NCBI NM_020245.5 NP_064630.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020245.5Link to Protein Sequence:NP_064630.2Re-query CCDS DB by Nucleotide ID:NM_020245Re-query CCDS DB by Protein ID:NP_064630Link to BLAST:NP_064630.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064630.2 1543 Q9NRJ4-1 1543 100% 0 0

Chromosomal Locations for CCDS 34561.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 158314017 158314268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158413065 158413193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158429736 158429897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158448996 158449176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158452134 158452268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158461563 158461729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158479751 158479975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158481055 158481289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158489588 158489732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158493573 158493717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158494753 158494846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158498669 158498812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158501678 158504178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 158506578 158506694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4632 nt):
ATGTATGCAGCAGTGGAACATGGGCCTGTGCTTTGCAGCGATTCCAACATCCTGTGCCTGTCCTGGAAGG
GGCGTGTCCCCAAGAGTGAGAAGGAGAAGCCTGTGTGCAGGAGACGCTACTATGAGGAAGGCTGGCTGGC
CACGGGCAACGGGCGAGGAGTGGTTGGGGTGACTTTCACCTCTAGTCACTGTCGCAGGGACAGGAGTACT
CCACAGAGGATAAATTTCAACCTCCGGGGCCACAATAGCGAGGTTGTGCTGGTGAGGTGGAATGAGCCCT
ACCAGAAACTGGCCACGTGCGATGCGGACGGAGGCATATTCGTGTGGATTCAGTACGAGGGCAGGTGGTC
TGTGGAGCTGGTCAACGACCGCGGGGCGCAGGTGAGTGATTTCACGTGGAGCCATGATGGAACTCAAGCA
CTTATTTCCTATCGAGATGGGTTTGTCCTGGTTGGGTCTGTCAGTGGACAAAGACACTGGTCATCCGAAA
TCAACTTGGAAAGTCAAATTACGTGTGGCATATGGACTCCTGACGACCAACAGGTGCTGTTTGGCACGGC
CGATGGGCAGGTGATTGTCATGGATTGCCACGGCAGAATGCTGGCCCACGTCCTCTTGCACGAGTCAGAC
GGTGTCCTCGGCATGTCCTGGAACTACCCGATCTTCCTGGTGGAGGACAGCAGCGAGAGCGACACGGACT
CAGATGACTACGCCCCTCCCCAAGATGGTCCGGCAGCATATCCCATCCCAGTGCAGAACATCAAGCCTCT
GCTCACCGTCAGCTTCACCTCGGGAGACATCAGCTTAATGAACAACTACGATGACTTGTCTCCCACGGTC
ATCCGCTCAGGGCTGAAAGAGGTGGTAGCCCAGTGGTGCACACAGGGGGACTTGCTGGCAGTCGCTGGGA
TGGAACGGCAGACCCAGCTTGGTGAGCTTCCCAATGGTCCCCTTCTGAAGAGTGCCATGGTCAAGTTCTA
CAATGTTCGTGGGGAGCACATCTTCACACTGGACACTCTCGTGCAGCGCCCCATCATCTCCATCTGCTGG
GGTCACCGGGATTCGAGGCTGTTGATGGCATCAGGACCAGCCCTGTACGTGGTGCGTGTGGAGCACCGGG
TGTCCAGCCTGCAGCTGCTGTGCCAGCAGGCCATCGCCAGCACCTTGCGTGAGGACAAGGACGTCAGCAA
GCTGACTCTGCCCCCCCGCCTCTGCTCCTACCTCTCCACTGCCTTCATCCCCACCATCAAGCCCCCAATT
CCAGATCCGAACAACATGAGAGACTTTGTCAGCTACCCATCAGCCGGCAACGAGCGGCTGCACTGCACCA
TGAAGCGCACAGAGGACGACCCGGAGGTGGGCGGCCCGTGCTACACGCTCTACCTGGAGTACCTGGGCGG
GCTTGTGCCCATCCTCAAAGGGCGGCGCATCAGCAAGCTGCGGCCAGAGTTCGTCATCATGGACCCGCGG
ACAGATAGCAAACCAGATGAAATCTATGGGAACAGCTTGATTTCTACTGTGATCGACAGCTGCAACTGCT
CAGACTCCAGTGACATTGAGCTGAGTGATGACTGGGCTGCCAAGAAATCTCCCAAAATCTCCAGAGCTAG
CAAATCACCCAAACTCCCAAGGATCAGCATTGAGGCCCGCAAGTCACCCAAGCTGCCCCGGGCTGCTCAG
GAGCTCTCCCGGTCCCCACGGTTGCCCCTGCGCAAGCCCTCTGTGGGCTCGCCCAGCCTGACTCGGAGAG
AGTTTCCTTTTGAAGACATCACTCAGCACAACTATCTTGCTCAGGTCACGTCTAATATCTGGGGAACCAA
ATTTAAGATTGTGGGCTTGGCTGCTTTCCTGCCAACCAACCTCGGTGCAGTAATCTATAAAACCAGCCTC
CTGCATCTCCAGCCGCGGCAGATGACCATTTATCTCCCAGAAGTTCGGAAAATTTCCATGGACTATATTA
ATTTACCTGTCTTCAACCCAAATGTTTTCAGTGAAGATGAAGATGATTTACCAGTGACAGGAGCATCTGG
TGTCCCTGAGAACAGCCCACCTTGTACCGTGAACATCCCTATTGCACCGATCCACAGCTCGGCTCAGGCT
ATGTCCCCCACGCAGAGCATAGGGCTGGTGCAGTCCCTACTGGCCAATCAGAATGTGCAGCTAGATGTCC
TGACCAACCAGACGACAGCTGTAGGGACAGCAGAACATGCAGGTGACAGTGCCACCCAGTACCCAGTCTC
CAACCGGTACTCCAATCCTGGACAGGTGATTTTCGGAAGCGTGGAAATGGGCCGCATCATTCAGAACCCC
CCTCCACTGTCCCTGCCTCCCCCGCCGCAGGGGCCCATGCAGCTGTCCACGGTGGGCCATGGAGACCGAG
ACCACGAACACCTGCAGAAGTCAGCCAAGGCCCTGCGGCCAACACCGCAGCTGGCAGCTGAGGGGGACGC
AGTGGTCTTTAGTGCCCCCCAGGAGGTCCAGGTGACGAAGATAAACCCTCCACCCCCGTACCCAGGAACC
ATCCCCGCTGCCCCCACCACAGCAGCACCCCCGCCCCCTCTGCCGCCCCCACAGCCCCCAGTGGATGTGT
GCTTGAAGAAGGGCGACTTCTCCCTCTACCCCACGTCAGTGCACTACCAGACCCCCCTGGGCTATGAGAG
GATCACCACCTTCGACAGCAGTGGCAACGTGGAGGAGGTGTGCCGGCCCCGCACCCGGATGCTGTGCTCC
CAGAACACGTACACCCTCCCCGGCCCGGGTAGCTCTGCCACCTTGAGGCTCACGGCCACTGAGAAGAAGG
TCCCTCAGCCCTGCAGCAGTGCCACCCTGAACCGCCTGACCGTCCCTCGCTACTCCATCCCCACCGGGGA
CCCACCCCCGTATCCTGAAATTGCCAGCCAGCTGGCCCAGGGGCGGGGGGCTGCCCAGAGGTCCGACAAT
AGCCTCATCCACGCTACCCTGCGGAGGAACAACCGTGAGGCTACGCTCAAGATGGCCCAGCTGGCCGACA
GCCCGCGGGCCCCCCTGCAGCCCCTGGCCAAGTCCAAGGGCGGGCCCGGGGGGGTGGTGACACAGCTCCC
AGCGCGGCCCCCACCTGCCCTGTACACCTGCAGTCAGTGCAGTGGCACAGGGCCCAGCTCACAGCCCGGA
GCCTCCCTGGCCCATACCGCCAGCGCCTCCCCGTTGGCCTCCCAGTCCTCCTACAGCCTCCTGAGCCCAC
CCGACAGCGCCCGCGACCGCACCGACTACGTCAACTCGGCCTTCACGGAGGACGAGGCCCTGTCCCAGCA
CTGTCAGCTTGAGAAGCCCTTGAGGCACCCTCCCCTGCCTGAAGCTGCTGTCACCCTGAAACGGCCACCC
CCTTACCAGTGGGACCCCATGCTGGGTGAGGATGTTTGGGTTCCTCAAGAAAGGACAGCACAGACTTCAG
GGCCCAACCCCTTAAAACTGTCCTCTCTGATGCTGAGTCAGGGCCAGCACCTGGACGTGTCCCGACTGCC
CTTCATCTCCCCCAAGTCTCCTGCCAGCCCCACTGCCACTTTCCAAACAGGCTATGGGATGGGAGTGCCA
TATCCAGGAAGCTATAACAACCCCCCTTTGCCTGGAGTGCAGGCTCCCTGCTCTCCCAAAGATGCCCTGT
CCCCAACGCAGTTTGCACAACAGGAGCCTGCTGTGGTCCTTCAGCCGCTGTACCCACCCAGCCTCTCCTA
TTGCACCCTGCCCCCCATGTACCCAGGAAGCAGCACGTGCTCTAGTTTACAGCTGCCACCTGTCGCCTTG
CATCCATGGAGTTCCTACAGCGCCTGCCCGCCCATGCAGAACCCCCAGGGCACTCTCCCCCCAAAGCCAC
ACTTGGTGGTGGAGAAGCCCCTTGTGTCCCCACCACCTGCCGACCTCCAAAGCCACTTGGGCACAGAGGT
GATGGTAGAGACTGCAGACAACTTCCAGGAAGTCCTCTCCCTGACCGAAAGCCCAGTCCCCCAGCGGACA
GAAAAATTTGGAAAGAAGAACCGGAAGCGCCTGGACAGCCGAGCAGAAGAAGGCAGCGTTCAGGCCATCA
CTGAGGGCAAAGTGAAGAAGGAGGCTAGGACTTTGAGTGACTTTAATTCCCTAATCTCCAGCCCACACCT
GGGGAGAGAGAAGAAGAAAGTGAAGAGTCAGAAAGACCAACTGAAGTCAAAGAAGTTGAATAAGACAAAC
GAGTTCCAGGACAGCTCCGAGAGCGAGCCTGAGCTGTTCATCAGCGGGGATGAGCTCATGAACCAGAGCC
AGGGCAGCAGAAAGGGCTGGAAAAGCAAGCGCTCCCCACGGGCCGCCGGCGAGCTGGAGGAGGCCAAGTG
CCGGCGGGCCAGTGAGAAGGAGGACGGGCGGCTGGGCAGCCAAGGCTTCGTGTACGTGATGGCCAACAAG
CAGCCGCTGTGGAACGAGGCCACCCAGGTCTACCAGCTGGACTTCGGGGGGCGGGTGACCCAGGAGTCCG
CCAAGAACTTCCAGATTGAGTTAGAGGGGCGGCAGGTGATGCAGTTTGGACGGATTGATGGCAGTGCGTA
CATTCTAGACTTCCAGTATCCGTTCTCAGCCGTGCAGGCCTTTGCAGTTGCCCTGGCCAACGTGACTCAG
CGCCTCAAATGA

Translation (1543 aa):
MYAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFTSSHCRRDRST
PQRINFNLRGHNSEVVLVRWNEPYQKLATCDADGGIFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQA
LISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESD
GVLGMSWNYPIFLVEDSSESDTDSDDYAPPQDGPAAYPIPVQNIKPLLTVSFTSGDISLMNNYDDLSPTV
IRSGLKEVVAQWCTQGDLLAVAGMERQTQLGELPNGPLLKSAMVKFYNVRGEHIFTLDTLVQRPIISICW
GHRDSRLLMASGPALYVVRVEHRVSSLQLLCQQAIASTLREDKDVSKLTLPPRLCSYLSTAFIPTIKPPI
PDPNNMRDFVSYPSAGNERLHCTMKRTEDDPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDPR
TDSKPDEIYGNSLISTVIDSCNCSDSSDIELSDDWAAKKSPKISRASKSPKLPRISIEARKSPKLPRAAQ
ELSRSPRLPLRKPSVGSPSLTRREFPFEDITQHNYLAQVTSNIWGTKFKIVGLAAFLPTNLGAVIYKTSL
LHLQPRQMTIYLPEVRKISMDYINLPVFNPNVFSEDEDDLPVTGASGVPENSPPCTVNIPIAPIHSSAQA
MSPTQSIGLVQSLLANQNVQLDVLTNQTTAVGTAEHAGDSATQYPVSNRYSNPGQVIFGSVEMGRIIQNP
PPLSLPPPPQGPMQLSTVGHGDRDHEHLQKSAKALRPTPQLAAEGDAVVFSAPQEVQVTKINPPPPYPGT
IPAAPTTAAPPPPLPPPQPPVDVCLKKGDFSLYPTSVHYQTPLGYERITTFDSSGNVEEVCRPRTRMLCS
QNTYTLPGPGSSATLRLTATEKKVPQPCSSATLNRLTVPRYSIPTGDPPPYPEIASQLAQGRGAAQRSDN
SLIHATLRRNNREATLKMAQLADSPRAPLQPLAKSKGGPGGVVTQLPARPPPALYTCSQCSGTGPSSQPG
ASLAHTASASPLASQSSYSLLSPPDSARDRTDYVNSAFTEDEALSQHCQLEKPLRHPPLPEAAVTLKRPP
PYQWDPMLGEDVWVPQERTAQTSGPNPLKLSSLMLSQGQHLDVSRLPFISPKSPASPTATFQTGYGMGVP
YPGSYNNPPLPGVQAPCSPKDALSPTQFAQQEPAVVLQPLYPPSLSYCTLPPMYPGSSTCSSLQLPPVAL
HPWSSYSACPPMQNPQGTLPPKPHLVVEKPLVSPPPADLQSHLGTEVMVETADNFQEVLSLTESPVPQRT
EKFGKKNRKRLDSRAEEGSVQAITEGKVKKEARTLSDFNSLISSPHLGREKKKVKSQKDQLKSKKLNKTN
EFQDSSESEPELFISGDELMNQSQGSRKGWKSKRSPRAAGELEEAKCRRASEKEDGRLGSQGFVYVMANK
QPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGSAYILDFQYPFSAVQAFAVALANVTQ
RLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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