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Report for CCDS3502.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
3502.1 |
Public |
Homo sapiens |
4 |
EXOC1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:55763](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:3502.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:55763](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 4 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 3502.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000346134.11 |
ENSP00000326514.7 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000346134.11](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000326514.7](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000346134](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000326514](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000381295.7 |
ENSP00000370695.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000381295.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000370695.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000381295](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000370695](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001024924.2 |
NP_001020095.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001024924.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001020095.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001024924](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001020095](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001020095.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_018261.4 |
NP_060731.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_018261.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_060731.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_018261](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_060731](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_060731.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 3502.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2685 nt): ATGACAGCAATCAAGCATGCATTACAAAGAGACATTTTTACACCAAATGATGAACGCCTGCTGAGCATTG TGAATGTCTGCAAAGCAGGAAAAAAGAAAAAGAACTGTTTTTTATGTGCCACAGTGACAACTGAACGCCC TGTGCAGGTTAAGGTGGTCAAAGTCAAGAAATCCGATAAGGGAGATTTCTACAAAAGGCAGATTGCATGG GCCCTTCGAGATCTTGCTGTGGTAGATGCCAAAGATGCTATCAAAGAAAATCCTGAATTTGATTTACACT TTGAAAAAATATATAAATGGGTTGCCAGCAGCACTGCTGAAAAGAATGCATTTATTTCATGCATTTGGAA ATTGAATCAGCGATATCTCCGGAAGAAAATTGATTTTGTCAATGTTAGCTCACAGCTTTTGGAAGAATCT GTTCCAAGTGGAGAAAATCAGAGTGTGACAGGAGGTGATGAAGAAGTAGTAGATGAATACCAAGAGTTAA ATGCAAGAGAAGAACAGGATATCGAAATAATGATGGAAGGCTGTGAATATGCAATCTCGAATGCGGAAGC CTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGCTAACATCCAGTCAATCATGGCATCT GAAAAACAAGTCAACATCCTGATGAAATTGCTAGATGAGGCTCTAAAGGAGGTAGATCAGATTGAATTGA AACTGAGCAGTTATGAGGAAATGCTCCAAAGTGTAAAAGAACAAATGGATCAGATCTCTGAAAGCAACCA CCTAATTCATCTTAGTAACACTAATAATGTAAAACTCCTATCTGAGATAGAGTTCCTTGTGAACCACATG GACTTGGCCAAAGGTCATATAAAGGCCCTTCAGGAAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCT GCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTCGACCAGGCCATGACTTGCTTCT GGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTTTGCCCGGAGACTGGCCAGTCAC CTCAACAATGTTTTTGTTCAACAGGGTCATGATCAGAGTTCGACTCTTGCCCAACACTCTGTTGAACTGA CTTTACCCAATCATCATCCATTTCATAGAGATTTGCTCCGATATGCCAAGCTGATGGAGTGGCTAAAGAG TACAGATTATGGAAAATATGAAGGACTAACAAAGAATTACATGGATTATTTATCCCGACTATATGAAAGA GAAATCAAAGATTTCTTTGAAGTTGCAAAGATCAAGATGACTGGCACAACTAAAGAAAGCAAGAAGTTTG CTACACTGCCTCGAAAAGAAAGTGCTGTCAAACAGGAAACAGAGAGTCTTCATGGAAGTTCGGGGAAATT AACTGGATCTACTTCTAGTCTAAATAAGCTCAGTGTTCAGAGTTCAGGGAATCGCAGATCTCAGTCATCT TCCCTGTTGGATATGGGAAACATGTCTGCCTCTGATCTCGATGTTGCTGACAGGACCAAATTTGATAAGA TCTTTGAACAGGTACTAAGTGAACTGGAGCCCCTATGTCTGGCAGAACAGGACTTCATAAGTAAATTTTT CAAACTACAGCAACATCAAAGTATGCCTGGAACTATGGCTGAAGCAGAGGACCTGGATGGAGGAACATTA TCACGGCAACATAATTGTGGCACACCACTGCCTGTTTCATCTGAGAAAGATATGATCCGCCAAATGATGA TTAAAATATTTCGCTGCATTGAGCCAGAGCTGAACAACCTAATTGCATTAGGAGACAAAATTGATAGCTT TAACTCTCTTTATATGTTAGTCAAAATGAGTCATCATGTGTGGACTGCACAAAATGTGGACCCTGCTTCT TTCCTAAGTACTACATTGGGAAATGTTTTGGTGACTGTCAAAAGGAACTTTGACAAATGCATTAGTAACC AAATAAGGCAAATGGAAGAAGTAAAGATCTCAAAAAAGAGTAAAGTTGGAATTCTTCCATTTGTTGCTGA ATTTGAAGAATTTGCTGGACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTCGTGGAGACCTGGATAAA GCATACACCAAACTTATCAGAGGAGTATTTGTTAATGTGGAGAAAGTAGCAAATGAAAGCCAGAAGACCC CCAGGGATGTGGTTATGATGGAAAACTTTCACCATATTTTTGCAACTCTTTCTCGATTGAAAATCTCATG TCTAGAAGCAGAAAAAAAAGAAGCCAAACAAAAATACACAGATCACCTTCAGTCTTATGTCATTTACTCT TTAGGACAACCTCTTGAAAAACTAAATCATTTCTTTGAAGGTGTTGAAGCTCGCGTGGCACAGGGCATAA GGGAGGAGGAAGTAAGTTACCAACTTGCATTTAACAAACAAGAACTTCGTAAAGTCATTAAGGAGTACCC TGGAAAGGAAGTAAAAAAAGGTCTAGATAACCTCTACAAGAAAGTTGATAAACATTTATGTGAAGAAGAG AACTTACTTCAGGTGGTGTGGCACTCCATGCAAGATGAATTTATACGCCAGTATAAGCACTTTGAAGGTT TGATAGCTCGCTGTTATCCTGGATCTGGTGTTACAATGGAATTCACTATTCAGGACATTCTGGATTATTG TTCCAGCATTGCACAGTCCCACTAA
Translation (894 aa): MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDKGDFYKRQIAW ALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQRYLRKKIDFVNVSSQLLEES VPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEYAISNAEAFAEKLSRELQVLDGANIQSIMAS EKQVNILMKLLDEALKEVDQIELKLSSYEEMLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHM DLAKGHIKALQEGDLASSRGIEACTNAADALLQCMNVALRPGHDLLLAVKQQQQRFSDLRELFARRLASH LNNVFVQQGHDQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYER EIKDFFEVAKIKMTGTTKESKKFATLPRKESAVKQETESLHGSSGKLTGSTSSLNKLSVQSSGNRRSQSS SLLDMGNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQQHQSMPGTMAEAEDLDGGTL SRQHNCGTPLPVSSEKDMIRQMMIKIFRCIEPELNNLIALGDKIDSFNSLYMLVKMSHHVWTAQNVDPAS FLSTTLGNVLVTVKRNFDKCISNQIRQMEEVKISKKSKVGILPFVAEFEEFAGLAESIFKNAERRGDLDK AYTKLIRGVFVNVEKVANESQKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYS LGQPLEKLNHFFEGVEARVAQGIREEEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEE NLLQVVWHSMQDEFIRQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH
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