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Report for CCDS35043.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35043.1 Public Homo sapiens 9 ABHD17B 24 110 108 CCDS HistoryNCBI Gene:51104Re-query CCDS DB by CCDS ID:35043.1Re-query CCDS DB by GeneID:51104See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35043.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333421.7 ENSP00000330222.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333421.7Link to Ensembl Protein Viewer:ENSP00000330222.6Re-query CCDS DB by Nucleotide ID:ENST00000333421Re-query CCDS DB by Protein ID:ENSP00000330222
Original member Current member NCBI NM_001025780.3 NP_001020951.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001025780.3Link to Protein Sequence:NP_001020951.1Re-query CCDS DB by Nucleotide ID:NM_001025780Re-query CCDS DB by Protein ID:NP_001020951Link to BLAST:NP_001020951.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020951.1 288 Q5VST6-1 288 100% 0 0

Chromosomal Locations for CCDS 35043.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 71866787 71867006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71870083 71870262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 71874614 71875080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (867 nt):
ATGAATAATCTTTCATTTAGTGAGCTATGTTGCCTCTTCTGCTGTCCACCTTGTCCAGGGAAGATTGCTT
CAAAATTAGCGTTTTTGCCACCTGATCCAACTTACACACTGATGTGTGATGAAAGCGGAAGCCGTTGGAC
TTTACATCTGTCTGAACGAGCAGACTGGCAGTATTCTTCTAGAGAAAAAGATGCTATTGAGTGTTTCATG
ACTAGAACCAGTAAAGGCAACAGAATTGCTTGTATGTTTGTACGTTGTTCACCCAATGCGAAATACACTT
TACTCTTCTCACATGGAAATGCTGTTGATCTTGGTCAAATGAGCAGCTTTTACATAGGACTAGGATCACG
GATTAATTGTAATATATTCTCATATGATTATTCTGGATATGGTGCCAGTTCCGGGAAACCCACAGAGAAG
AACCTCTATGCAGACATTGAAGCTGCTTGGCTTGCTCTTAGGACAAGATATGGCATTCGCCCTGAAAATG
TGATTATATATGGCCAAAGTATAGGGACAGTACCGTCTGTGGATCTTGCTGCTCGATATGAGAGTGCTGC
TGTTATTCTTCATTCTCCTCTGACTTCGGGAATGCGAGTTGCCTTTCCTGATACCAAGAAGACCTACTGT
TTTGATGCATTCCCAAACATTGACAAAATCTCTAAGATAACCTCTCCAGTATTAATAATTCATGGGACTG
AAGATGAAGTCATTGACTTTTCACATGGCCTCGCATTGTTTGAACGTTGCCAAAGACCTGTGGAGCCTCT
CTGGGTTGAAGGAGCAGGTCACAATGATGTGGAACTTTATGGACAGTATCTTGAAAGGTTGAAACAGTTT
GTGTCACAGGAACTGGTAAATTTGTAA

Translation (288 aa):
MNNLSFSELCCLFCCPPCPGKIASKLAFLPPDPTYTLMCDESGSRWTLHLSERADWQYSSREKDAIECFM
TRTSKGNRIACMFVRCSPNAKYTLLFSHGNAVDLGQMSSFYIGLGSRINCNIFSYDYSGYGASSGKPTEK
NLYADIEAAWLALRTRYGIRPENVIIYGQSIGTVPSVDLAARYESAAVILHSPLTSGMRVAFPDTKKTYC
FDAFPNIDKISKITSPVLIIHGTEDEVIDFSHGLALFERCQRPVEPLWVEGAGHNDVELYGQYLERLKQF
VSQELVNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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