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Report for CCDS35105.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35105.1 Public Homo sapiens 9 ZNF483 24 110 108 CCDS HistoryNCBI Gene:158399Re-query CCDS DB by CCDS ID:35105.1Re-query CCDS DB by GeneID:158399See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35105.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358151.8 ENSP00000350871.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358151.8Link to Ensembl Protein Viewer:ENSP00000350871.4Re-query CCDS DB by Nucleotide ID:ENST00000358151Re-query CCDS DB by Protein ID:ENSP00000350871
Original member Current member NCBI NM_001007169.6 NP_001007170.1 Accepted alive Link to Nucleotide Sequence:NM_001007169.6Link to Protein Sequence:NP_001007170.1Re-query CCDS DB by Nucleotide ID:NM_001007169Re-query CCDS DB by Protein ID:NP_001007170Link to BLAST:NP_001007170.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007170.1 256 Q8TF39-2 256 100% 0 0

Chromosomal Locations for CCDS 35105.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 111527396 111527807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 111530875 111530963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 111533739 111533865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 111534261 111534353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 111576365 111576414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (771 nt):
ATGCAAGCTGTAGTGCCCTTGAACAAGATGACAGCCATCTCACCAGAACCTCAAACTCTGGCCTCGACTG
AACAAAATGAGGTCCCAAGAGTGGTTACTTCTGGGGAACAAGAAGCTATTTTAAGAGGAAATGCTGCTGA
TGCAGAGTCTTTCAGACAGAGGTTTAGGTGGTTTTGTTACTCAGAAGTAGCTGGACCCAGGAAAGCTCTG
AGTCAACTCTGGGAGCTCTGCAATCAGTGGCTGAGACCAGACATTCACACGAAAGAACAGATTTTAGAGC
TTCTGGTGTTTGAGCAGTTCCTGACCATTTTGCCTGGGGAGATCAGGATTTGGGTAAAGTCACAACATCC
TGAGAGTAGTGAGGAAGTGGTGACCCTAATAGAAGATTTGACCCAGATGCTTGAAGAAAAAGATCCAGTC
TCTCAAGATTCTACTGTTTCCCAAGAGGAGAACTCAAAAGAGGATAAAATGGTCACTGTTTGTCCCAATA
CTGAGTCCTGTGAATCTATAACATTGAAGGATGTAGCTGTGAACTTTTCAAGAGGAGAGTGGAAGAAGCT
GGAGCCTTTTCAAAAGGAGCTATATAAGGAAGTGCTACTGGAAAACCTCAGGAACCTAGAATTTCTGGAC
TTTCCAGTTTCAAAATTAGAGTTGATTTCCCAGCTAAAGTGGGTTGAATTGCCATGGCTGCTGGAAGAAG
TCTCAAAAAGCTCCCGACTAGACATACATGGAGCAGTAAAAAAGATGCAGATGTTCTCTGAGGCTGAATA
A

Translation (256 aa):
MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGNAADAESFRQRFRWFCYSEVAGPRKAL
SQLWELCNQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHPESSEEVVTLIEDLTQMLEEKDPV
SQDSTVSQEENSKEDKMVTVCPNTESCESITLKDVAVNFSRGEWKKLEPFQKELYKEVLLENLRNLEFLD
FPVSKLELISQLKWVELPWLLEEVSKSSRLDIHGAVKKMQMFSEAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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