NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS35811.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35811.1 Public Mus musculus 1 Enah 23 108 98 CCDS HistoryNCBI Gene:13800Re-query CCDS DB by CCDS ID:35811.1Re-query CCDS DB by GeneID:13800See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35811.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000078719.12 ENSMUSP00000077781.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000078719.12Link to Ensembl Protein Viewer:ENSMUSP00000077781.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000078719Re-query CCDS DB by Protein ID:ENSMUSP00000077781
Original member NCBI NM_010135.3 NP_034265.2 Updated not alive Link to Nucleotide Sequence:NM_010135.3Link to Protein Sequence:NP_034265.2Re-query CCDS DB by Nucleotide ID:NM_010135Re-query CCDS DB by Protein ID:NP_034265
Current member NCBI NM_010135.4 NP_034265.2 Accepted alive Link to Nucleotide Sequence:NM_010135.4Link to Protein Sequence:NP_034265.2Re-query CCDS DB by Nucleotide ID:NM_010135Re-query CCDS DB by Protein ID:NP_034265Link to BLAST:NP_034265.2

Chromosomal Locations for CCDS 35811.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 181905860 181905897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181906387 181906444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181908298 181908376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181913307 181913373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181917199 181917247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181918258 181918315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181918438 181918583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181919325 181919629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181921658 181922500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181923560 181923840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181930678 181930762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181935660 181935716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181956394 181956571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181961754 181961919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182019530 182019534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2415 nt):
ATGAGTGAACAGAGTATCTGTCAGGCAAGAGCTGCTGTGATGGTCTATGATGATGCCAATAAGAAGTGGG
TGCCAGCTGGTGGCTCAACTGGGTTCAGCAGAGTACATATATATCACCATACAGGCAACAACACATTCAG
AGTTGTGGGCAGAAAGATTCAAGACCATCAGGTTGTGATAAACTGTGCCATTCCTAAAGGGCTGAAGTAC
AATCAAGCTACACAGACTTTCCACCAATGGAGGGATGCTAGACAGGTGTATGGTCTCAACTTTGGCAGCA
AAGAGGATGCCAATGTCTTCGCAAGTGCCATGATGCATGCCTTAGAAGTGTTAAATTCACAGGAAGCAGC
CCAGAGCAAGGTTACTGCTACGCAGGACAGCACTAATTTGCGATGTATTTTCTGTGGGCCAACATTGCCT
AGACAAAATTCACAGCTACCTGCTCAAGTTCAAAATGGCCCATCCCAAGAAGAGCTGGAAATCCAGAGAA
GGCAACTGCAAGAACAGCAGCGACAGAAGGAACTGGAGAGGGAAAGAATGGAGAGGGAAAGGTTGGAGAG
AGAACGACTAGAACGAGAGAGGCTAGAGAGGGAGCGCCTGGAACAAGAGCAGCTGGAGCGGCAGCGGCAG
GAAAGGGAGCACGTGGAGCGGCTGGAGAGGGAGAGGCTGGAGCGCCTGGAGCGAGAGAGGCAGGAGCGGG
AGCGAGAGCGCCTGGAGCAGCTGGAGCGGGAGCAAGTGGAGTGGGAGCGAGAGCGCAGAATGTCCAATGC
TGCTCCATCTTCAGACAGCTCCCTGTCTAGTGCTCCACTTCCTGAGTATTCCAGTTGCCAGCCGCCTTCG
GCACCTCCTCCATCATATGCTAAAGTCATCTCAGCTCCGGTGTCAGACGCCACTCCTGATTACGCTGTAG
TGACTGCTTTGCCACCTACTTCCACACCCCCTACACCACCACTGAGACACGCAGCGACACGTTTTGCAAC
ATCTCTAGGTTCAGCCTTCCACCCTGTTCTTCCCCATTACGCTACAGTTCCTCGTCCTCTCAACAAAAAC
TCTCGACCTTCTTCTCCTGTGAACACACCCTCTTCTCAGCCTCCAGCTGCGAAGTCCTGTGCCTGGCCTA
CTTCCAATTTCTCGCCCCTCCCTCCATCTCCTCCAATAATGATTAGCAGCCCCCCTGGCAAAGCTACTGG
CCCACGGCCTGTCCTTCCCGTTTGTGTCTCCTCTCCTGTGCCCCAAATGCCTCCGTCACCAACAGCACCC
AATGGGTCGCTAGACTCTGTAACATACCCAGTGTCTCCACCGCCTACCTCAGGGCCAGCAGCGCCACCTC
CGCCGCCACCGCCACCGCCACCGCCGCCGCCACCACCACCGCCGCTGCCACCGCCGCCGCTGCCTCCCCT
CGCCTCACTCTCACACTGTGGATCACAGGCTTCTCCTCCTCCAGGCACCCCTCTTGCCTCAACTCCCTCA
TCCAAGCCCAGTGTTCTCCCTTCTCCCTCTGCAGCTGCCCCTGCCTCTGCGGAGACCCCTCTAAATCCTG
AGCTGGGAGACTCCTCTGCTTCCGAGCCAGGCTTGCAGGCAGCCTCTCAGCCGGCCGAGTCGCCAACCCC
ACAGGGCCTTGTCTTGGGACCACCTGCACCTCCGCCACCACCCCCTCTCCCATCAGGCCCTGCCTACGCC
TCAGCACTTCCTCCTCCCCCAGGACCCCCTCCACCACCTCCACTGCCATCCACTGGTCCTCCTCCTCCAC
CCCCTCCACCACCCCCTCTTCCTAATCAAGCTCCTCCCCCTCCTCCCCCACCTCCTGCCCCTCCCCTCCC
CGCATCTGGAATTTTCTCTGGATCCACGTCAGAAGACAATCGCCCTTTAACTGGACTTGCAGCTGCAATT
GCGGGAGCAAAACTTAGGAAAGTGTCCCGGGTGGAGGATGGCTCTTTCCCAGGTGGAGGGAATACTGGGA
GTGTGAGCTTGGCCTCATCCAAAGCAGACGCTGGGCGTGGGAATGGACCTCTTCCTCTAGGGGGTAGTGG
CTTAATGGAAGAAATGAGTGCCCTGCTGGCCAGGAGGAGAAGAATTGCTGAGAAGGGATCAACAATAGAA
ACAGAACAAAAGGAAGACAGAAATGAAGATGCAGAGCCTATAACTGCTAAGGCCCCATCAACAAGTACAC
CTGAACCAACCAGAAAACCTTGGGAAAGAACAAACACAATGAACGGCAGTAAGTCACCTGTCATCTCCAG
ACCCAAATCCACACCTTCATCACAGCCAAGTGCCAATGGAGTCCAGACAGAAGGCCTTGACTATGACAGG
CTGAAGCAGGACATTTTAGATGAGATGAGAAAAGAGCTGGCAAAGCTGAAGGAGGAGCTTATTGACGCAA
TCAGGCAGGAGCTGAGCAAGTCGAACACTGCATAA

Translation (804 aa):
MSEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKY
NQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVLNSQEAAQSKVTATQDSTNLRCIFCGPTLP
RQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERMERERLERERLERERLERERLEQEQLERQRQ
EREHVERLERERLERLERERQERERERLEQLEREQVEWERERRMSNAAPSSDSSLSSAPLPEYSSCQPPS
APPPSYAKVISAPVSDATPDYAVVTALPPTSTPPTPPLRHAATRFATSLGSAFHPVLPHYATVPRPLNKN
SRPSSPVNTPSSQPPAAKSCAWPTSNFSPLPPSPPIMISSPPGKATGPRPVLPVCVSSPVPQMPPSPTAP
NGSLDSVTYPVSPPPTSGPAAPPPPPPPPPPPPPPPPPLPPPPLPPLASLSHCGSQASPPPGTPLASTPS
SKPSVLPSPSAAAPASAETPLNPELGDSSASEPGLQAASQPAESPTPQGLVLGPPAPPPPPPLPSGPAYA
SALPPPPGPPPPPPLPSTGPPPPPPPPPPLPNQAPPPPPPPPAPPLPASGIFSGSTSEDNRPLTGLAAAI
AGAKLRKVSRVEDGSFPGGGNTGSVSLASSKADAGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIE
TEQKEDRNEDAEPITAKAPSTSTPEPTRKPWERTNTMNGSKSPVISRPKSTPSSQPSANGVQTEGLDYDR
LKQDILDEMRKELAKLKEELIDAIRQELSKSNTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH