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Report for CCDS36129.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36129.1 Public Mus musculus 11 Atp10b 23 108 98 CCDS HistoryNCBI Gene:319767Re-query CCDS DB by CCDS ID:36129.1Re-query CCDS DB by GeneID:319767See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36129.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077659.5 ENSMUSP00000076844.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077659.5Link to Ensembl Protein Viewer:ENSMUSP00000076844.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000077659Re-query CCDS DB by Protein ID:ENSMUSP00000076844
Original member NCBI NM_176999.3 NP_795973.2 Updated not alive Link to Nucleotide Sequence:NM_176999.3Link to Protein Sequence:NP_795973.2Re-query CCDS DB by Nucleotide ID:NM_176999Re-query CCDS DB by Protein ID:NP_795973
Current member NCBI NM_176999.4 NP_795973.2 Accepted alive Link to Nucleotide Sequence:NM_176999.4Link to Protein Sequence:NP_795973.2Re-query CCDS DB by Nucleotide ID:NM_176999Re-query CCDS DB by Protein ID:NP_795973Link to BLAST:NP_795973.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_795973.2 1474 B1AWN4 1474 100% 0 0

Chromosomal Locations for CCDS 36129.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 43151615 43151889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43153224 43153418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43172710 43172914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43189574 43189659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43194557 43194663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43197437 43197568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43201140 43201267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43201968 43202220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43203012 43203250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43212411 43212599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43215950 43216550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43218905 43219014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43222149 43222275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43225475 43225659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43230344 43230665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43234363 43234439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43235650 43235775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43245404 43245604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43247452 43247532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43248886 43248990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43254176 43254363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43259409 43259901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4425 nt):
ATGACTTGCTCTCTTGACTTTTCTTGGCTCCGATGGAAATGGCGAACCCAAGATGGCTTCTCCCAATCTC
CATCAGAAACCACACCACTGCTTTCTCCAGAGACAGACAGACAGAGCCACAACACAGCAGAGCAGCGGGT
CGTATACCCCAACAACAGCATGTGTCACCAGGACTGGAAGAAGGTCTGCAGGAGGTACCCAGGCAACAGC
ATCTGTACAACCAAGTACACTCTCCTCACCTTCCTGCCCCAGAATCTCTTTGAGCAGTTTCATAGGTGGG
CCAACCTCTACTTCCTGTTCCTGGTGATTCTGAACTGGATGCCCTCCATGGAAGTCTTCCACAGGGAAAT
CACCATATTTCCACTGGCCACTGTCCTGTTGATCATCATGGTCAAAGATGGCATAGAGGACTTCAAGAGA
TATTGCTTTGACAGGGAGATGAATAGTGCCAGCATTCAAATATATGAAAGAAAAGAACAACGCTACATGC
TGAAGCGCTGGCAGGATGTGCGTGTGGGAGACTTTGTCCAGATGCAGTGCAATGAGATTGTCCCAGCAGA
CATTCTCCTTCTCTTCTCCTCAGACCCCAGTGGGGTCTGCCATCTGGAAACTGCCAACTTGGATGGAGAG
ACCAACCTCAAGCAGAGGCGTGTCGTGAAGGGCTTCTCACAGCCGGAGGTGCAGTTCCAACCAGAGCACT
TCCACAGTACCATCGTGTGTGAAAAGCCCAACAACCATCTCAGCAAGTTTAAGGGTTATATGGAGCATCC
TGATCAGACCAGGACTGGCTTTGGCAGCGAGAGTCTTCTGCTCCGAGGCTGCACCATCCGAAACACCGAG
GTGGCGGCTGGCATTGTCATCTACGCAGGCCATGAAACAAAAGCCATGCTGAACAATAGTGGCCCCCGAT
ACAAACGCAGCAAAATCGAGCGGCGCATCAACACAGATATCTTCTTCTGCATCGGCCTCCTCTTCCTCAT
GTGCCTCATTGGAGCTGTAGGCCACAGCCTCTGGAACGGTACCTTTAAAGAACATCCTCCCTTTGACGTG
CCAGATGCCGATGGGAACTTCCTCTCTCTTGCCCTTGGAGGCTTCTATATGTTCCTCACAATGATCATCT
TACTCCAGGTGTTGATCCCGATCTCCTTGTATGTGTCCATTGAGCTGGTAAAACTTGGGCAAGTGTTCCT
CCTTCACAACGACCTTGACCTATATGATGAAGAAACTGATTTGTCTATTCAATGCCGAGCTCTAAATATT
ACAGAGGACCTGGGCCAGATCCAGTACATCTTCTCTGACAAGACAGGGACCCTGACGGAAAACAAGATGG
TGTTCAGGCGTTGTACCATTGTGGGCAGCGAATATTGTCACCAAGAAAATGCCAAGAGACTGGAGATGCC
AAAGGAGCTGGACTCAGATGGTGAGGAGTGGACCCAGTACCAATGTCTGTCCTTCCCACCTAGATGGGCC
CAGGGCTCAACAACGATGAGAAGCCAAGGAGGTGCCCAGCCTCTGAGGAGATGCCATAGTGCCCGGGTTC
CAATCCAGAGCCACTGCCGACAAAGATCTGTGGGGAGGTGGGAAACCTCACAGCCTCCTGTGGCCTTCAG
CAGCTCAATAGAAAAAGATGTGACTCCTGACAAAAACCTCCTGAGCAAAGTGAGAGATGCTGCCCTGTGG
CTAGAGACCTCAGATACCAGACCTGCCAAGCCTTCGCACTCCACCACTGCCTCCATTGCTGACTTCTTTC
TCGCCCTAACCATCTGCAACTCCGTCATGGTGTCCACAACCACTGAGCCCAGAAAGAGGGTTACCACTCC
ACCAGCCAACAAGGCTCTAGGGACATCCTTGGAGAAGATTCAACAGCTCTTCCAAAGGCTGAAGCTTTTG
AGTCTCAGTCAATCATTCTCATCCACGGCCCCCTCTGACACAGATCTAGGAGAGAGTCTGGGACCCAACT
TGCCCACCATAGACTCCGATGAGAAAGATGACACGTCCGTGTGTAGCGGTGACTGTTCCACTGACGGTGG
CTACCGGAGCAGCACATGGGAGCAGGGTGACATCCTGGGGTCTGAATCAGGCACTTCTCTGGAGGAGGGG
CTGGAGGCACCAACTCTCAGCCAAGATGAACCAGAGCTGTGCTACGAGGCTGAAAGCCCTGATGAAGCAG
CCCTAGTGCATGCTGCCCGTGCCTACAGTTTCACACTAGTGTCTAGGACACCTGAGCAGGTGACTGTGCG
TCTGCCCCAGGGCATCTGCCTCACCTTTGACCTCCTTTTCACGCTGGGCTTTGACTCTGTCCGGAAGAGA
ATGTCAGTAGTGGTGAGGCACCCACTGACTGATGAAATAATCGTCTACACCAAGGGTGCTGACTCAGTCA
TCATGGACCTGCTGGAAGATCCAGCCTGTGAGAGTAATATTGATGTGGAAAAGAAGCTGAAGAGAATCCG
AGCCAGGACCCAAAAACATCTGGACTTGTATGCAAGAGATGGCCTTCGAACCCTGTGCATCGCTAAGAAG
GTTGTAGATGAGGAGGACTTCCAGAGGTGGGCCAGCTTCCGTCGTGAGGCTGAAGCATCCCTTGACAACC
GAGAGGAGCTTCTGATGGAGACAGCCCAGCACCTGGAGAATCACCTCACTTTACTTGGAGCCACTGGGAT
TGAAGATCGACTCCAAGAAGGGGTTCCAGATACCATCGCTGCACTGCGGGAGGCTGGAATCCAGCTCTGG
GTTTTGACAGGAGATAAACAGGAGACAGCTGTCAATATCGCATATTCCTGCAAACTGCTGGATCAGACTG
ACACAGTGTACTCCATTAACACAGAGAATCAGGAAACCTGCGAGTCCATCCTCAATTGTACATTGGAAGA
CATAAAGAGGTTTCATGAACCGCAGCAGCCAGCCAGAAAACTCTGTGGGCACCGCATCCCACCTAAGATG
CCATCTGTTAACTCGGGAGCTATGGCTCCTGAAATTGGACTGGTCATTGATGGGAAGACACTGAATGCAA
TTTTCCAGGGAAAGCTGGAGAATAAGTTCCTGGAGTTGACTCAGTACTGTCGGTCTGTCCTGTGTTGCCG
CTCCACCCCACTGCAGAAGAGTATGATTGTCAAGCTGGTGCGAGACAAGTTGAGCGTCATGACTCTTTCC
ATAGGGGATGGAGCCAATGACGTAAGCATGATTCAGGCTGCTGACATCGGCATTGGAATATCTGGGCAGG
AAGGCATGCAGGCTGTCATGTCCAGTGACTTTGCCATTGCCCGCTTCAGCCACCTCAAGAAGCTGCTGCT
TGTGCATGGCCACTGGTGTTACTCGCGCCTGGCCAGGATGGTAGTGTATTACTTCTACAAGAATGTGTGC
TACGTCAACCTGCTGTTTTGGTACCAGTTCTTCTGTGGTTTCTCTGGCTCCACCATGATCGATTATTGGC
AGATGATATTCTTCAATCTCTTCTTCACGTCCTTGCCACCCATCATCTTTGGAGTCCTCGATAAAGATGT
CTCTGCAGAAACACTCCTGGCATTGCCTGAGTTATACAAGAGTGGCCAGAACTCTGAGTGCTACAACCTG
CCAACTTTCTGGGTTTCCATGGCTGATGCATTCTACCAGAGCCTCATCTGTTTCTTTATCCCTTACCTGA
CCTACCGAGGTTCAGACATAGATGTCTTTACTTTTGGAACTCCAATCAACACCATCTCCCTCACCACCAT
CCTCTTGCACCAGGCAATGGAAATGAAGACATGGACTGTCCTCCATGGCCTTGTCCTCCTGGGAAGCTTC
TTGATGTACTTCGTGGTTTCCCTAATATACAACGCCACTTGTGTCACCTGCAACAGCCCCACCAATCCCT
ACTGGGTGATGGAAAGGCAGCTCTCAGACCCCACGTTCTACCTCATCTGCCTCCTCACTCCGGTTGTGGC
TCTTCTACCAAGGTATTTTCTCCTATCTCTACAAGGTACATATGGGAAGTCTCTAATCTCAAAAGCTCAG
AAAATTGACAAGCTGCCCATAGACAAAAGAAACCTTGAAATCCAGAACTGGAGAAGCAAACAGAGGCCTG
CCCCTGCCTCTGCTTCTGCTTCTGCCTCAGCTCCTGCTACTGGCACTGTCCACACTAGACCCCCATGCCA
TCCAGTACCACCTGAAGCACAGCAGAACTTTGGAGCCAGTACCTCAAAGAGCTCTGGCCCTCCCAGACAG
AAGCATGTGGAAGACCGGGTTCTCCAGGATCCGAGATGCAGCAGAGAGCATTCCAGGGATGACACATGCA
CTGTAGATACATTAGCTAAACTTTCTTCTGGGGAATGCCTTCTGGATCCAAACAGGACAGTGGCTCCTAC
AGCCTATTCCAGGGGTCAAAAGGATGTATCTCGACACTCAAGCAAAGGCAGCCATCGCAGATCTCAGAGT
TCACTGACCATATGA

Translation (1474 aa):
MTCSLDFSWLRWKWRTQDGFSQSPSETTPLLSPETDRQSHNTAEQRVVYPNNSMCHQDWKKVCRRYPGNS
ICTTKYTLLTFLPQNLFEQFHRWANLYFLFLVILNWMPSMEVFHREITIFPLATVLLIIMVKDGIEDFKR
YCFDREMNSASIQIYERKEQRYMLKRWQDVRVGDFVQMQCNEIVPADILLLFSSDPSGVCHLETANLDGE
TNLKQRRVVKGFSQPEVQFQPEHFHSTIVCEKPNNHLSKFKGYMEHPDQTRTGFGSESLLLRGCTIRNTE
VAAGIVIYAGHETKAMLNNSGPRYKRSKIERRINTDIFFCIGLLFLMCLIGAVGHSLWNGTFKEHPPFDV
PDADGNFLSLALGGFYMFLTMIILLQVLIPISLYVSIELVKLGQVFLLHNDLDLYDEETDLSIQCRALNI
TEDLGQIQYIFSDKTGTLTENKMVFRRCTIVGSEYCHQENAKRLEMPKELDSDGEEWTQYQCLSFPPRWA
QGSTTMRSQGGAQPLRRCHSARVPIQSHCRQRSVGRWETSQPPVAFSSSIEKDVTPDKNLLSKVRDAALW
LETSDTRPAKPSHSTTASIADFFLALTICNSVMVSTTTEPRKRVTTPPANKALGTSLEKIQQLFQRLKLL
SLSQSFSSTAPSDTDLGESLGPNLPTIDSDEKDDTSVCSGDCSTDGGYRSSTWEQGDILGSESGTSLEEG
LEAPTLSQDEPELCYEAESPDEAALVHAARAYSFTLVSRTPEQVTVRLPQGICLTFDLLFTLGFDSVRKR
MSVVVRHPLTDEIIVYTKGADSVIMDLLEDPACESNIDVEKKLKRIRARTQKHLDLYARDGLRTLCIAKK
VVDEEDFQRWASFRREAEASLDNREELLMETAQHLENHLTLLGATGIEDRLQEGVPDTIAALREAGIQLW
VLTGDKQETAVNIAYSCKLLDQTDTVYSINTENQETCESILNCTLEDIKRFHEPQQPARKLCGHRIPPKM
PSVNSGAMAPEIGLVIDGKTLNAIFQGKLENKFLELTQYCRSVLCCRSTPLQKSMIVKLVRDKLSVMTLS
IGDGANDVSMIQAADIGIGISGQEGMQAVMSSDFAIARFSHLKKLLLVHGHWCYSRLARMVVYYFYKNVC
YVNLLFWYQFFCGFSGSTMIDYWQMIFFNLFFTSLPPIIFGVLDKDVSAETLLALPELYKSGQNSECYNL
PTFWVSMADAFYQSLICFFIPYLTYRGSDIDVFTFGTPINTISLTTILLHQAMEMKTWTVLHGLVLLGSF
LMYFVVSLIYNATCVTCNSPTNPYWVMERQLSDPTFYLICLLTPVVALLPRYFLLSLQGTYGKSLISKAQ
KIDKLPIDKRNLEIQNWRSKQRPAPASASASASAPATGTVHTRPPCHPVPPEAQQNFGASTSKSSGPPRQ
KHVEDRVLQDPRCSREHSRDDTCTVDTLAKLSSGECLLDPNRTVAPTAYSRGQKDVSRHSSKGSHRRSQS
SLTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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