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Report for CCDS36591.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36591.1 Public Mus musculus 13 Mtr 23 108 98 CCDS HistoryNCBI Gene:238505Re-query CCDS DB by CCDS ID:36591.1Re-query CCDS DB by GeneID:238505See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36591.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099856.5 ENSMUSP00000097442.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099856.5Link to Ensembl Protein Viewer:ENSMUSP00000097442.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000099856Re-query CCDS DB by Protein ID:ENSMUSP00000097442
Original member Current member NCBI NM_001081128.3 NP_001074597.1 Accepted alive Link to Nucleotide Sequence:NM_001081128.3Link to Protein Sequence:NP_001074597.1Re-query CCDS DB by Nucleotide ID:NM_001081128Re-query CCDS DB by Protein ID:NP_001074597Link to BLAST:NP_001074597.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074597.1 1253 A6H5Y3 1253 100% 0 0

Chromosomal Locations for CCDS 36591.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 12187005 12187091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12188041 12188153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12189347 12189539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12190204 12190404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12193614 12193810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12195238 12195393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12197913 12197988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12199046 12199144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12200197 12200278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12204743 12204863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12205290 12205357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12212388 12212488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12212671 12212778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12215413 12215565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12216810 12216899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12221422 12221562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12222155 12222271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12225462 12225641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12227684 12227869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12230945 12231085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12232902 12233014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12235457 12235536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12237981 12238048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12239649 12239710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12241565 12241665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12243935 12244029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12244555 12244617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12247319 12247425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12247893 12247985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12249845 12249914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12250602 12250691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 12253764 12253973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3762 nt):
ATGAAGAAAACCCTGCAGGATGAGATTGAAGCCATTCTTCGGAAGAGGATCATGGTGCTAGACGGTGGGA
TGGGGACCATGATCCAGCGGTACAAACTAAGTGAAGAACATTTCCAAGGTCAAGAGTTTAAAGATCACAG
CAGGCCACTGAAAGGCAACAATGACATCTTAAGTATAACTCAGCCTGATATTATTTACCAGATTCATAAG
GAATACTTGCTGGCTGGAGCAGATATCATCGAAACAAACACTTTCAGCAGTACTAGTATCGCCCAGGCTG
ACTATGGCCTTGAACACTTGGCCTACCGGATGAACAAGTGCTCTGCAGATGTGGCCAGAAAAGCCGCTGA
GGAGATAACTCTGCAGACAGGAGTCAAGAGGTTTGTGGCTGGAGCTCTGGGTCCGACTAATAAGACACTT
TCTGTCTCCCCATCTGTGGAAAGGCCAGATTATAGGAACATCACATTTGATGAGCTTGTTGACGCATACC
AGGAGCAGGCCAAGGGACTGCTGGATGGCAGGGTCGACATCTTACTCATTGAAACAATTTTTGATACAGC
TAATGCCAAAGCAGCCTTGTTTGCGATCCAGAACCTCTTTGAAGAGAATTATGCTCCTCCTCGGCCTATC
TTTATTTCTGGGACCATTGTTGATAAAAGTGGAAGGACTCTTTCTGGGCAGACGGGAGAGGCTTTTGTCA
CCAGCGTGTCTCATTCGGACCCCCTGTGCATTGGATTAAATTGTTCTCTGGGTGCAGCTGAAATGAGGCC
TTTCATTGAAACAATTGGAAAATGTACAACAGCCTATGTCCTCTGTTACCCAAATGCAGGTCTTCCCAAC
ACTTTTGGCGACTATGATGAAACACCATCCACGATGGCCACGCACCTGAAGGACTTTGCTGTGGATGGCT
TGGTGAATATAGTTGGTGGATGCTGTGGTTCAACACCTGATCACATCAGGGAAATTGCGGAAGCTGTGAA
AAAGTGTAAGCCAAGAGTCCCCCCTGCTAGTGTTTTTGAAGGACATATGTTACTGTCTGGTCTAGAGCCC
TTCAGGATTGGACCATACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTGGCAGGATCCAGGAAAT
TTGCTAAACTCATCATGGCAGGAAACTATGAAGAAGCCCTGAGCATTGCCAAAGCACAGGTGGAAATGGG
AGCTCAGGTGCTCGATATCAACATGGACGACGGCATGCTGGATGGTCCCAGTGCAATGACCAGATTTTGC
AACTCCATTGCTTCTGAGCCTGACATTGCCAAGGTGCCCCTGTGCATTGACTCTTCTAACTTTGCCGTGA
TTGAAGCTGGGTTGAAGTGCTGCCAAGGGAAGTGCATAGTCAACAGCATCAGCCTCAAGGAGGGGGAGGG
GGACTTCCTGGAGAAGGCCCGGAAGATTAAGAAGTTTGGAGCTGCTGTGGTGGTTATGGCTTTTGATGAG
GAAGGACAAGCAACAGAAACAGATGTTAAAGTCAATGTGTGCACCAGAGCTTACCATCTACTTGTGGACA
AAGTGGGCTTCAATCCAAATGACATCATCTTTGACCCCAACATCCTTACCATTGGTACTGGAATGGAGGA
ACATAACTTGTATGCTATCAATTTTATCCATGCAACAAGAGTCATTAAGGAAACCTTACCAGGAGTCAGA
ATAAGTGGAGGTCTTTCCAACTTATCCTTCTCCTTCCGAGGGATGGAAGCCATTCGAGAAGCAATGCATG
GTGTGTTCCTTTATCACGCGATCAAGTTTGGTATGGACATGGGGATAGTCAATGCCGGCAACCTCCCTGT
GTATGATGCTATCCACAAGGACCTTCTTCAGCTCTGTGAAGACCTCATCTGGAACAAAGACTCTGAGGCT
ACTGAGAAACTCTTGCGATATGCCCAGACTCATGGCACAGGAGGGAAGAAAGTCATCCAGACAGATGAGT
GGAGGAATGGCTCCATTGAAGAGCGCCTGGAGTATGCTCTTGTGAAGGGCATTGAAAAGCACATTGTTGA
AGATACTGAAGAAGCCAGGTTAAACGGGGAAAAATACCCTCGGCCTCTGAATATAATTGAAGGGCCCCTA
ATGAATGGCATGAAAGTGGTTGGTGATCTTTTTGGAGCTGGAAAGATGTTTCTACCTCAGGTTATAAAGT
CAGCCCGTGTCATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCATGGAAAAAGAAAGAGAAGAAGCCAG
ATTGATTAATGGTTCGGTTGAAGAAGAGGACCCTTACCAAGGCACCATTGTGCTGGCCACTGTTAAAGGG
GACGTGCATGACATCGGCAAGAACATAGTTGGCGTGGTGCTGGCCTGTAACAATTTCAGAGTTATTGATT
TAGGAGTCATGACTCCCTGTGATAAGATACTTCAAGCTGCTCTGGACCACAAAGCAGATATAATTGGCTT
GTCAGGACTCATCACTCCATCCTTGGATGAGATGATTTTTGTTGCCAAGGAAATGGAGAGGTTGGCTATA
AAGATTCCATTGTTGATAGGAGGAGCAACCACTTCAAGAACCCACACAGCAGTTAAAATTGCACCACGGT
ACAGCGCGCCTGTGATCCACGTCCTAGATGCATCCAAGAGTGTGGTGGTGTGTTCTCAGCTGTTAGATGA
AAATCTGAGAGATGACTACTTTGAAGAAATACTGGAAGAGTATGAAGATATTAGACAGGACCACTATGAG
TCTCTCAAAGAGAGAAAATACGTACCCCTAAGTCAAGCCAGAAAACACGGTTTCCACATTGATTGGCTCT
CTGAACCTCATCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAGGACTACAACCTGCAAAAGCT
GGTGGACTACATTGACTGGAAGCCTTTCTTTGACGTCTGGCAGCTCCGGGGCAAGTACCCGAACCGAGGA
TTTCCCAAGATATTTAATGACAAAGCAGTAGGTGAAGAAGCCAGAAAGGTATACAATGATGCTCAGAATA
TGCTGAACATACTGATTAGTCAAAAGAAACTGCAGGCCAGGGGTGTGGTTGGATTCTGGCCAGCACAGAG
TGTCCAGGATGACATCCACCTGTATGCAGAGGGGGTGGTGCCCCAGGCCGCTGAGCCCATAGCCACCTTC
TATGGACTGAGGCAGCAGGCTGAGAAGGACTCTTCTAGTACAGACCCCTACCACTGCCTCTCAGACTTCA
TTGCTCCTTTGCATTCTGGTGTCTGTGACTACTTGGGTCTGTTTGCTGTTGCCTGCTTTGGGGTTGAAGA
GCTGAGTAAGACCTATGAGGATGATGGCGATGACTACAGCAGCATCATGGTGAAGGCGCTGGGCGACAGG
CTGGCAGAGGCCTTTGCAGAGGAGCTCCATGAGAGAGTTCGCCGAGAACTGTGGGCCTACTCTAGGAGTG
AGCAGTTGGGCGTCCCAGACTTGCGCAGACTCCGGTATGAGGGCATCCGGCCAGCTCCTGGTTACCCCAG
CCAGCCTGACCATACTGAGAAGCTTACCATGTGGAGACTGGCCAGCATCGAGCAGGCCACAGGCATCAGG
CTGACAGAATCCTTGGCAATGGCACCCGCTTCAGCAGTGTCAGGGCTGTACTTCTCCAACGTAAAGGCCA
AATATTTTGCTGTGGGGAAAATTTCCAAAGATCAGACTGAGGATTATGCTTTGAGGAAGAACATGCCAGT
GGCCGAGGTGGAGAAATGGCTTGGTCCCATTCTGGGCTATGACACAGACTGA

Translation (1253 aa):
MKKTLQDEIEAILRKRIMVLDGGMGTMIQRYKLSEEHFQGQEFKDHSRPLKGNNDILSITQPDIIYQIHK
EYLLAGADIIETNTFSSTSIAQADYGLEHLAYRMNKCSADVARKAAEEITLQTGVKRFVAGALGPTNKTL
SVSPSVERPDYRNITFDELVDAYQEQAKGLLDGRVDILLIETIFDTANAKAALFAIQNLFEENYAPPRPI
FISGTIVDKSGRTLSGQTGEAFVTSVSHSDPLCIGLNCSLGAAEMRPFIETIGKCTTAYVLCYPNAGLPN
TFGDYDETPSTMATHLKDFAVDGLVNIVGGCCGSTPDHIREIAEAVKKCKPRVPPASVFEGHMLLSGLEP
FRIGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEEALSIAKAQVEMGAQVLDINMDDGMLDGPSAMTRFC
NSIASEPDIAKVPLCIDSSNFAVIEAGLKCCQGKCIVNSISLKEGEGDFLEKARKIKKFGAAVVVMAFDE
EGQATETDVKVNVCTRAYHLLVDKVGFNPNDIIFDPNILTIGTGMEEHNLYAINFIHATRVIKETLPGVR
ISGGLSNLSFSFRGMEAIREAMHGVFLYHAIKFGMDMGIVNAGNLPVYDAIHKDLLQLCEDLIWNKDSEA
TEKLLRYAQTHGTGGKKVIQTDEWRNGSIEERLEYALVKGIEKHIVEDTEEARLNGEKYPRPLNIIEGPL
MNGMKVVGDLFGAGKMFLPQVIKSARVMKKAVGHLIPFMEKEREEARLINGSVEEEDPYQGTIVLATVKG
DVHDIGKNIVGVVLACNNFRVIDLGVMTPCDKILQAALDHKADIIGLSGLITPSLDEMIFVAKEMERLAI
KIPLLIGGATTSRTHTAVKIAPRYSAPVIHVLDASKSVVVCSQLLDENLRDDYFEEILEEYEDIRQDHYE
SLKERKYVPLSQARKHGFHIDWLSEPHPVKPTFIGTQVFEDYNLQKLVDYIDWKPFFDVWQLRGKYPNRG
FPKIFNDKAVGEEARKVYNDAQNMLNILISQKKLQARGVVGFWPAQSVQDDIHLYAEGVVPQAAEPIATF
YGLRQQAEKDSSSTDPYHCLSDFIAPLHSGVCDYLGLFAVACFGVEELSKTYEDDGDDYSSIMVKALGDR
LAEAFAEELHERVRRELWAYSRSEQLGVPDLRRLRYEGIRPAPGYPSQPDHTEKLTMWRLASIEQATGIR
LTESLAMAPASAVSGLYFSNVKAKYFAVGKISKDQTEDYALRKNMPVAEVEKWLGPILGYDTD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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