CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS36712.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
36712.1 |
Public |
Mus musculus |
13 |
Zfp595 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:218314](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:36712.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:218314](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 13 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 36712.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000109735.8 |
ENSMUSP00000105357.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000109735.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000105357.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000109735](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000105357](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000168892.8 |
ENSMUSP00000126862.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000168892.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000126862.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000168892](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000126862](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000169142.7 |
ENSMUSP00000129905.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000169142.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000129905.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000169142](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000129905](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_177622.3 |
NP_808290.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_177622.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_808290.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_177622](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_808290](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_808290.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 36712.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1878 nt): ATGGAGGATATGCTGTCATTCTGGGATGTGGCTATGTATTTCTCTGCAGAGGAGTGGGAATACCTGGGTC CTGCTCAGTGGAAAATGTACAGAGATGTGATGCTGGAGAATTACAGCAACCTTGTGTTCCTGGGTCTTGC TTCCACTAAGCCATATCTAGTCACATTTCTGGAGCAAAGACAAGAGCTTTCAGATGTGAAGAGACAAGCG GCCACTGCTAAGTACTCAGGGGGGAAAAGCTATACGTGTAAAGAATGTGGCAAAGTCTTTGAGGCGGAAA AAGGATTTCAAAATCATCAGATAATTCATTTAGGAGTGAAGTCCTGCAAGTGTGAAGAGTGTGGCAAGTC CTTCCATTTTTCATCACTACTTTCTGAACACAAAAGGATTCATACAGGAGAAAAACCCTACAAGTGTGAA ATACATAGCAAGGCCTTTCATGTTCCATCAAAACTTTTTCAACACAGGATAATTCACACAGGAGAAAAAC CCTACAACTGTGAAGTATGTGGCAAGGCCTTCTGCACTTCATTATTCCTTTCTAAACACAAGATAATTCA TATGGGAAAGAATCCTTGCAAGTGTGAAGTATGTGGCAAGGCCTTCGAATATCCATCAAGACTTTCAAAA CATAAGAAAATTCATACAGGAGAGAAACCATACAAGTGTAAAGTATGTGGAAAGGCCTACCGCTCTCCAT CATCACTTTGTGAACACAAGAGAACTCATACAGGAGGGAAACCCTACAAGTGTGAAGTATGTGGCAAGGC CTTCCACTATCCATCATTACTTTCAAAACACAAGATAATTCATACAGAAGAAAAACCCTACAAGTGTGAA GTATGTGGTAAGGCCTTCCATTATCTGTCAAGACTTTCTAACCATAAGACAATTCATACAGGAGAGAAAC CGTACAAGTGTGAAGTATGTGGGAAGGCCTTTCATGTTCCATCATCACTTTCTGAACACAAGAGAACTCA TACAGGAAAGAAACCTTACAAATGTGAAGTGTGTGGCAAGGAGTTTCGTTGTCCATCATTATTTTCTAAC CACAAGAGAATACATACAGGTGAAAAACCCTATAGTTGTGAAGTATGTGGCAAGGCCTTCCATACTACAA CTTTATGTTCTATACACAAGAGAATTCACACAGGAGAGAAACCTTACAAGTGTGAAGTATGTGGCAAGGC CTTCCATTATTCATCAAGACTTTCCAACCATAAGAAAATTCATGCCGGAGAGAAACCATACAAGTGTGAA GTATGTGGCAAGGCCTTCCATTATCCATCCATACTTTCTAAACACAAGACAATTCATACAGAAGATAATC CCTACAAGTGTGAAGTATGTGGCAAAGCATTTGATTATCCATCAAGACTTTCCAACCATAAGAAAGTTCA TACAGAAGAGAAACCATACCAGTGTGACATATGTGGCAAGGCCTTCCATTATGCATCATTACTTTCTAAA CACAAGATAATTCATATTGGAGAAAAGCCCTATAAGTGTGAAGTATGTGACAAGGCCTTTCATTACCCAT CAAGACTTTCCAACCATAAGAAAATTCATACAGGAGAGAAACCATACAAGTGTGAAATATGTGGAAATGT CTTCCGTTTTCCATCATCCCTTTCTGAACATAAGAGAATTCACACTGGAGACAAACCATACAAGTGCCAA ATATGTGGCAAGGCCTTCCATTATCCATCATTACTTTCTAAACACAAGATAATTCATACAGGAGAAAATC CCTACAAGTGTGAAGTATGTGGCAAGTTCTTTAATTATTCATCAAGACTTTACAAACATAAGAAAATTCA TACACGAGAGAAGTCCTACAAATATAAAGAATGTGGCCTAGCTTTCTATTGTCAATAA
Translation (625 aa): MEDMLSFWDVAMYFSAEEWEYLGPAQWKMYRDVMLENYSNLVFLGLASTKPYLVTFLEQRQELSDVKRQA ATAKYSGGKSYTCKECGKVFEAEKGFQNHQIIHLGVKSCKCEECGKSFHFSSLLSEHKRIHTGEKPYKCE IHSKAFHVPSKLFQHRIIHTGEKPYNCEVCGKAFCTSLFLSKHKIIHMGKNPCKCEVCGKAFEYPSRLSK HKKIHTGEKPYKCKVCGKAYRSPSSLCEHKRTHTGGKPYKCEVCGKAFHYPSLLSKHKIIHTEEKPYKCE VCGKAFHYLSRLSNHKTIHTGEKPYKCEVCGKAFHVPSSLSEHKRTHTGKKPYKCEVCGKEFRCPSLFSN HKRIHTGEKPYSCEVCGKAFHTTTLCSIHKRIHTGEKPYKCEVCGKAFHYSSRLSNHKKIHAGEKPYKCE VCGKAFHYPSILSKHKTIHTEDNPYKCEVCGKAFDYPSRLSNHKKVHTEEKPYQCDICGKAFHYASLLSK HKIIHIGEKPYKCEVCDKAFHYPSRLSNHKKIHTGEKPYKCEICGNVFRFPSSLSEHKRIHTGDKPYKCQ ICGKAFHYPSLLSKHKIIHTGENPYKCEVCGKFFNYSSRLYKHKKIHTREKSYKYKECGLAFYCQ
|