CCDS Report for Consensus CDS

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Report for CCDS36894.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
36894.1	Public	Mus musculus	14	Ddhd1	23	108	98

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36894.1

Original	Current	Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status	Links
		EBI	ENSMUST00000111828.3	ENSMUSP00000107459.2	Accepted	alive
		NCBI	NM_176845.5	NP_789815.3	Accepted	alive

Chromosomal Locations for CCDS 36894.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)

Genome Browser links:

Chromosome	Start	Stop
14	45595483	45595664
14	45599102	45599185
14	45601565	45601756
14	45602639	45602891
14	45605053	45605202
14	45608938	45609013
14	45610492	45610754
14	45614163	45614269
14	45616530	45616636
14	45619269	45619416
14	45620712	45620840
14	45629580	45629753
14	45657222	45658011

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2655 nt):
ATGAACTACCCGGGCCGCGGCGCCCCACGGAGCCCCGAGCGTAACGGCCGCGGCGGCGGTGCCTGGGAGC TGGGCTCGGACGCGGCGGGCGTGTTCGGCGGCGGCGGCTGCTGCTTCGAGCACCAGCCGGGCGACAGCGT GCCGCTGTCGCTGCTGCGCGCCGAGCCGCTGCACCTGGCACCGGGCGCCGACGACCTGAGCCACCTGGCT CTGGACCCGTGCCTCAGCGACGAGACCTACGACTTCAGCTCGGCCGAGTCCGGCTCGTCGTTGCGCTACT ACAGCGAGGGCGAGAGCGCGGGCGGCGGCAGCTCTTCTTCGCCTCCGCCGCCGCTCGTCGCCCAGAACTC GGGGGGCGGCGGGGCGGCGGGAGGGGGCCCCGGGGACAGGAAGCGCGCCCGGCCCGGCGGCGCAGCCGCC CGGCACCGCTACGAGGTGGTGACGGAGCTGGGCCCCGAGGAGGTGCGCTGGTTCTACAAGGAAGACAAGA AGACCTGGAAGCCCTTCATCGGCTACGACTCTCTGCGCATCGAGCTCGCCTTCCGGACCCTGCTGCAGAC CACGGGCGCCCAGGCCCGGGCGGCGGGCCGCGATGGAGACCGGGTGTGTGGCCCAAGCTCCAGCTTCGGG GAGGAAGACGAGGAGGACAGCGCCTGCGGCTTCTGCCCGCGCGCGGCGGGGCCTGAGCCGGAGATGGAGG AGCTGGTGACCATCGAGCCGGTGTGCGTGCGCGGCGGCCTCTACGAGGTGGATGTCACTCAAGGAGAGTG CTACCCGGTGTACTGGAACCAAGCTGATAAAATACCAGTAATGCGTGGACAGTGGTTTATTGATGGGACG TGGCAACCTCTAGAAGAAGAAGAAAGTAATTTAATTGAGCAAGAACATCTCAGTTGTTTTAGGGGTCAGC AGATGCAAGAAAATTTTGATATTGAAGTGTCAAAATCCTTAGATGGAAAAGACGCTGTTCACAGTTTCAA GCTGAGTCGGAACCACGTGGACTGGCACAGCATGGATGAAGTCTATCTCTACAGTGACGCAACAACATCC AAAATTGCGAGAACCGTTACCCAAAAACTGGGCTTTTCTAAAGCCTCCAGCAGTGGGACCAGACTGCACA GAGGTTATGTAGAAGAAGCCACACTGGAAGACAAGCCGTCGCAGACTTCTCATATCGTGTTTGTTGTGCA CGGCATTGGACAGAAGATGGACCAAGGAAGAATCATCAAAAACACAGCCATGATGAGAGAGGCTGCAAGG AAAATGGAAGAAAAGCATTTTTCCAACCATGCAACACATGTTGAATTTCTGCCTGTTGAATGGCGATCAA AGCTTACTCTTGATGGAGACACAGTTGATTCCATCACTCCTGACAAAGTGCGAGGCCTGAGGGACATGCT CAACAGCAGCGCGATGGACATCATGTACTACACCAGCCCACTCTACAGGGATGAGCTAGTTAAAGGCCTT CAGCAAGAGCTGAATCGATTATATTCCCTTTTCTGTTCCCGGAATCCAGACTTTGAAGAGAAAGGGGGTA AAGTCTCAATAGTGTCCCATTCCTTGGGGTGTGTAATCACTTATGACATCATGATGGGCTGGAATCCAGG TGGACTCTATGAGCAGCTGCTGCAGAAGGAGGAAGAGCTGCCCGACGAGCGGTGGATGAGCTATGAAGAG CGGCATCTTCTTGACGAGCTCTATATAACAAAGCGACGGCTGAGGGAAATAGAAGATCGGCTGCACGGAT TGAAGGCGCCATCCATATCACAAACACCTGCCTTAAAATTTAAGGTTGAAAATTTCTTCTGTATGGGATC TCCGCTAGCAGTTTTTTTGGCATTACGCGGCATCCGACCAGGAAATTCTGGAAGTCAAGACCACATTTTA CCTAGAGAGATCTGTAACCGCTTACTAAATATTTTTCATCCTACGGACCCAGTGGCCTACAGATTAGAAC CGTTGATTTTGAAACACTACAGCAACATTTCTCCAGTCCAGATCCACTGGTACAACACTTCAAACCCTCT ACCTTATGAGCATATGAAGCCAAATTTTCTCAACCCAGCAAAAGAACCTACCTCAGTTTCAGACAGTGAG AACATAGCAGCTATCCCAAGCCCTGTGACCTCCCCCGTCTTATCTCGGCGCCACTATGGAGAATCTATAA CTAACATTGGCAAAGCAAGCATATTGGGGGCTGCTAGCATTGGAAAGGGCCTTGGAGGAATGTTGTTCTC AAGATTTGGACGTTCTTCAGCATCACAGCCGTCTGAGCCATCTAAAGACTCACTGGAAGATGATAAGAAG CCTTCAGCTTCACCCTCTACCACCACCGTGGCAACGCAGACCCTGCCGCACAGTGGCTCCGGCTTCCTCG ACTCCGCATATTTCAGACTTCAAGAATCGTTCTTTTATCTCCCACAACTTCTTTTTCCGGAAAATGTAAT GCAGAGTAAAGATGATAGCCTCGTGGAACTGGAACACAGGATCGACTTTGAACTCAGAGAAGGCCTTGTG GAGAGCCGCTATTGGTCAGCCGTCACGTCGCACACTGCCTATTGGTCATCCTTGGATGTCGCTCTTTTTC TTTTAACATTCATGTACAAACACGAGCATGATACCGAGGCCAAGCCCAGCCTAGGTTCACTCTGA
Translation (884 aa):
MNYPGRGAPRSPERNGRGGGAWELGSDAAGVFGGGGCCFEHQPGDSVPLSLLRAEPLHLAPGADDLSHLA LDPCLSDETYDFSSAESGSSLRYYSEGESAGGGSSSSPPPPLVAQNSGGGGAAGGGPGDRKRARPGGAAA RHRYEVVTELGPEEVRWFYKEDKKTWKPFIGYDSLRIELAFRTLLQTTGAQARAAGRDGDRVCGPSSSFG EEDEEDSACGFCPRAAGPEPEMEELVTIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFIDGT WQPLEEEESNLIEQEHLSCFRGQQMQENFDIEVSKSLDGKDAVHSFKLSRNHVDWHSMDEVYLYSDATTS KIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTSHIVFVVHGIGQKMDQGRIIKNTAMMREAAR KMEEKHFSNHATHVEFLPVEWRSKLTLDGDTVDSITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGL QQELNRLYSLFCSRNPDFEEKGGKVSIVSHSLGCVITYDIMMGWNPGGLYEQLLQKEEELPDERWMSYEE RHLLDELYITKRRLREIEDRLHGLKAPSISQTPALKFKVENFFCMGSPLAVFLALRGIRPGNSGSQDHIL PREICNRLLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMKPNFLNPAKEPTSVSDSE NIAAIPSPVTSPVLSRRHYGESITNIGKASILGAASIGKGLGGMLFSRFGRSSASQPSEPSKDSLEDDKK PSASPSTTTVATQTLPHSGSGFLDSAYFRLQESFFYLPQLLFPENVMQSKDDSLVELEHRIDFELREGLV ESRYWSAVTSHTAYWSSLDVALFLLTFMYKHEHDTEAKPSLGSL

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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