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Report for CCDS37137.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37137.1 Public Mus musculus 15 Triobp 23 108 98 CCDS HistoryNCBI Gene:110253Re-query CCDS DB by CCDS ID:37137.1Re-query CCDS DB by GeneID:110253See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37137.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109689.8 ENSMUSP00000105311.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109689.8Link to Ensembl Protein Viewer:ENSMUSP00000105311.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000109689Re-query CCDS DB by Protein ID:ENSMUSP00000105311
Original member Current member NCBI NM_138579.4 NP_613045.3 Accepted alive Link to Nucleotide Sequence:NM_138579.4Link to Protein Sequence:NP_613045.3Re-query CCDS DB by Nucleotide ID:NM_138579Re-query CCDS DB by Protein ID:NP_613045Link to BLAST:NP_613045.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_613045.3 1968 Q99KW3-4 1968 100% 0 0

Chromosomal Locations for CCDS 37137.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 78951033 78951055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78957105 78957204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78958227 78958372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78959855 78960074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78960949 78961105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78966294 78968586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78972535 78972646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78973252 78974292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78976467 78976544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78987892 78987948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78990817 78990885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78990985 78991074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78991329 78991438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78992904 78993432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78994042 78994152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78999797 78999944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79001521 79001623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79002048 79002207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79002285 79002398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79003706 79003792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79004445 79004603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5907 nt):
ATGTCCATGGAGCAAGACACCAGAGCACTGCTGCCCACCCAGGGCACTGCCTGGGCTACAGCCTCTGCCC
CAGTCGCCAGACTCCAGGGTCCCCAGGGAGACTCCCACCAGGCCTGCTCTCAGGAGCCTCACAGCCCTTC
CAGTGCTGAGGCACCCTACTGCGACCTGCCTCGCTGCCCACCGGCCCTGCAGAACCCACTCCGCACCACC
ACCTGTGTCGGCCAGTCTGTGCACAGCCTTGGTCTCGGCCTTGGGCAGGAGCCTCAGAGGGTCTGGTCCC
CAACAACAGCTCTCCCTGCAGAGGGCCCTGCAGCTGCCCCAAAGAACAGACACCAGGACTCCGAGGGGAT
ACCCTATCTGGAGGGCCTGGCCCGTAGCAGCTGCACTGACGACAACGACAACAAGGACGAAGACGAGGAC
CCTAACTCCAACACCAGCTCCAGCCAAGACAGCAATACCCCTCATGATACCAGCAATTCCTCTTCTGTGG
ATTGGGACACTACTGAGAGACCAGGGGTGGTCCCCAGCAGGAACAGACTCACAGAGATGATCCCAAGGAG
GCCTCAGGAGGGACTGAGAGCTGACAGTGCTCGAAAGGCCACCAGGTCCCCAGCCCGAGGAGACACAGCA
GGCCAGAGGAAGGAGAATTCTGGCAGTGGTGGACAGAGCGCTGGCCAGCACTGGGCAAAGCTGCGATCAG
AAAGCGGCTACTTCTCTCTGGAGCGACAGCGCTCAGGGCAAACCCAGGCTTCCTCCGGGACACCACCGAG
CGGACCTCGGGGCACCACCCAGGCTTCTTCTGCCCAAAGGGATGTTTTCCAGGCTGCTCCTGCACAAGAA
GCTCCCCAAACCTCCTCTCTGCCCCGAAACACCCAAAGGGACACACAGCGGAGCACCCCTAGAACCTCCT
CTCCTTCCAGAGTATCCCAGCGGGACACTCCCAGAGTCATGTCCACCCAGCGGAAGAATACTCCTCTTTC
CTCTCCCCTCAGAGCCACTCCAGAGACCCTAAAGATCTCTGCACCAGAAGATGGCACCCATGTTACACCA
TCTCCATGTGTCCAAGACTCCTCTCTCAACAGAACCAGCCAGCGGGACAGCTCTAGAACTCCCTGTATCC
AGTGGGACAATCCCAGGGCCTCCTCTCCCAACAGAACTACTCAGCGGGACAACCCTAGGACTCCCTGTAC
CCAGAGGGACAATCCCAGGGCCTCCTCTCCCAACAGAACTACTCAGCGGGACAACCCTAGGACTCCCTGT
ACCCAGAGGGACAATCCCAGGGCCTCCTCTCCCAACAGAACTACTCAGAGGGACAACCCCAGGACTCCCT
GTGCCCAGAGGGACAATCCCAGGGCTGCTTCTCCCAACAGAAGTACTCAGCGGGACAGCCCCAGGACTCC
CTGTGCCCAACGGGACAATCCCAGGGCCTCCTCTCCCAACAGAACTGCCCAGCGAGACAACCCCAGGACT
CCCTGTGCCCAGCGGGACAACCCCAGGACCTCCTGCACATCACAGAATACCCCCAGGACCCCTTCTACCC
AAGCAGATAAGACTACAGCTTCCTGCAGCAAATGGGAGCATCTGCGAAGCGCCTGCACCCAGCGAGACAA
CCCCAGGACCTTCTCTCAAGGCTGCACCCAAAAGGACAATCCAGGACCACCCTCGCCCCGCCGTGCCACT
CAGGGGAGTAATTCCAGGAACCCTTCCCCCCACCGTACCAACAAAGATATCCCTTGGGCTTCCTTTCCCC
TTCGGCCAACACAGAGTGACAGTCCCCGAACCTCATCTCCATCGCGCACCAAACAAAACCAGGTGCCTTG
GGCATCCATTTCTCTCCGGCCAACCCAAGGGGACAAGCCTCAGACCTCAGCTCCTACCAGGCTAGCTCAC
AATGACCCTCCCCAGCAGTATTCGCCATCCCTGGCCACCACCTCCTCCTCCTCTCATAACCCTGGCCATT
CCAGTGCCTCTAGGACTTCATCGCCTCTTCACGCAGCACCTCGAGGGGCTCCCCAGACCTCTTTGGAGTC
CTCTCAGCCACCCTGCACTGTGTGCATCGGGCACCGGGACGCACCTCGCGCCTCTTCCCCACCTCGCTAT
TTTCAGTACGACCCTTTCCCCTTCTTCCCAGATCCCCGCTCGTCTGAGAGTGAATCGCCCCACCACGAAC
CCCCCTACATGCCGCCTGCAGTGTGTATTGGGCACCGTGATGCCCCCCGGGCCACTTCGCCACCTCGTCA
CACCCAGTTCGATCCCTTCCCCTTCCTCCCAGACACATCAGATGCTGATAATGAGTCCCCGCAGCACGAC
CCCCCTCAGTTTCCCCCACCAGTGTGCATCGGGTACCGCGACGCTCCGCGGGCCTCTTCCCCACCACGCC
AGTTCCCAGAGCCCTCCTTCTTCCAAGATCTCCCCAGGGCCAGCACAGAGAGCCTTGTCCCTTCCACAGA
CTCTATGCATGAGCCGCCCCACATTCCCACTCCTGTATGTATCGGACACAGAGACGCTCCCTCCTTCTCC
TCCCCGCCACGCCAGGCCCCCGAGCCTTCCCTCTTCTTCCAGGATCCTCCTGGGACCAGTATGGAGAGTC
TTGCTCCTTCCATTGACTCTCTGCATGGCTGCCCACTGCTGCCCCCCCAAGTTTGCATCGGCCATCGGGA
TGCACCCAGAGCCTCCTCTCCTCCCCGCCACCCACCTAGTGACATAGGTCTCCTGGCACCCTCACCTCCA
CCAGGTAGCTCGGGCTCCCGGGGCTCAGCACCCCCAGGGGAGACCAGACACAACTTGGAGAGGGAGGAGT
ACACCATGCTGGCTGACCTGCCCCCACCCAGGAGGCTGGCTCAGAGGGGGCCAGAGCCCCAGGCACAGGG
CAGCAACGAGGGCCGTACCCGCAGCCCTGGCCGAGCAGAGGTGGAGCGCCTCTTCGGGCAAGAGCGCAGG
AAATCGGAGGCACCGGGGGCCTTCCAGACTCGGGATGAGGGACGGTCACAGCGGCCCAGCCAAGCTCAGA
GCCAACTTCGAAGACAGTCCAGCCCTGCCCCCAGCAGGCAGGTGACCAAGCCCTCTGCCAAGCAGGCAGA
GCCAACCCGGCAGAGCCGAACAGGACCGCCACATCCTAAGAGTCCTGACAAGCGGCCTGAGGGAGACCGG
CAGCTCCAGAGGACCTCACCACCTGCCAGGACACCAGCCAGGCCCCCTGAGAGAAAGGCTCAGATAGAGA
GGCATCTGGAGAGTGGCCACACTGGCCCGAGGCAGTCTCTGGGAGGGTGGCAGAGCCAGGAGAGGCTGTC
AGGACCTCAAAGTCCTAACAGACACCCAGAGAAGAGCTGGGGCAGCCAGAAAGAGGGCCCAAGCCTGGGG
GGTTGGCCGGAACTTGAGGGTCCCAGCCTGGAGGGGATATGGAGGGGTCCTCCCCAGGAGCACAGGGAAC
AGTGGGGACATTCAGAGGCCTGGGAGGAGCCTCCCAGTAATGGGATACAGGGGGCTCCCCCAAGGGGCCA
AGGTAGACTTCAGGAGCTGTCCAGACCCCACCAGCCTACGCCTTCCTCAGAGAACTCCTGGGCAGGCCCA
GCAGAGTGTTCGTGTGCCCTGCAGCCTGAGGCCAGCACTGCTGTGGGCTGGAGGGCCGAGGGAACATCCC
CACATCAGCGTAGTGCTGAGAGGCCACCCGACCTAGATTGGAGGGACCTGCTAGGCCTTCTCCGGGCACC
TGAGGATGGGGCCTGGACCCGGCTCCCAAGGCTGGACTGGGAAGGCCTCCTGGAGCTCCTGCAGGCTCGG
CTGCCCCAAAAGGACCCGGCTAGGCACTGGCATGACCCAGCCAAGGCTTCAGGACCAGAGCAGGGTTCCT
CAGGCACAGAGGATACCCTGAAGACAGAGCCGCAGACCCAGCCTGAAGGACGGGCCAAGGCCACCCTAGC
CAATGGACACAGGCCTGGTCAGCAGTCTGAGAGCCCAGCACAGCTACCCAGCCCTGCCTGTACCTCCACC
CAGTGGCCAACCACCAAAGTGACAAGCGGACCAGAAACGTCACCTCTGGCTGCTCTGGAGCAGATAGATC
ACCTAGAGAGCCACAGCCCACCGGACCTGGAGTTCCAGCCAGAGGAACCTGAGGCATCAGAACCAAGCCG
AGGCGAAGACTCACGGGCTGTCCAGAAGCAGGCTGACTCGCCCGATCTGCTCAACTTCAAGAAAGGATGG
ATGTCAATCTTGGATGAGCCTGGAGAGTGGAAAAAGCATTGGTTTGTGCTGACGGATTCAAGCCTCAAAT
ATTACAGAGACTCCACGGCTGAGGAGGCAGATGAGCTGGACGGTGAGATCGACCTGCGGTCCTGTACTGA
CGTCACAGAGTATGCGGTCCAGCGCAACTATGGCTTCCAGATCCACACCAAGGACGCCGTTTATACCCTG
TCGGCCATGACCTCGGGCATCCGGCGGAACTGGATTGAGGCTCTCAGGAAAACTGTGCGGCCAACTTCAG
CCCCAGATGTCACCAAGCTCTCCGACTGCAATAAAGAAAACACGCTGCATGGCTATGGCACCCAGAAGAG
CTCCCTGAAGATAGGGGAGCAGCGGACAGGCTCTGAGGTTATCGGCCGGGGTGGTCCTCGCAAGGCGGAT
GGACCACGGCCGTCACTGGACTACGTGGAGCTCTCTCCATTAGCGCCAAGCTCCCCACAGCGCATGCGCA
CTCTCTCCCGCTCCACTCCCGAGCGCCCCACCAAGCAGGAGGATCTGGAGCGGGACTTGGCCCAACGCTC
TGAGGAAAGACGCAAGTGGTTCGAGTCCACGGACGGCAGGACCCCAGAGACGCCCAGTGGCGATGGGTCT
CGAAGGGGCCTGGGTGCCCCCCTGACTGATGACCAGCAGAGCAGGCTCAGTGAGGAGATTGAGAAGAAGT
GGCAGGAGTTGGAAAAGCTGCCCCTGCGGGAGAACAAGCGAGTGCCACTCACCGCCCTGCTCAACCAAGC
CCACAACGATCGTCGGGGACCTACAAGTGACAGCCATGAGGCCCTGGAGAAGGAGGTCCAGTCTCTCCGT
GCCCAGCTGGAGGCTTGGCGTCTCCGAGGGGAAGCTCCTCAGAATGCACCGAGACTCCAGGAGGACAGCC
ATATCCCCCCAGGCTACATCTCGCAGGAAGCCTGTGAGCGCAGCCTGGCAGAGATGGAGTCCTCACACCA
GCAGGTGATGGAGCAGCTGCAGCGGCACCATGAGCGAGAGCTGCAGCGGCTGCAGCAGGAGAAGGAGTGG
CTCCTGGCCGAGGAGACGGCTGCCACGGCCTCAGCTATTGAAGCCATGAAGAAGGCGTATCAAGAAGAGC
TAAGCCGGGAGCTGAGCAAAACCCGGAGTCTCCAGCAGGGCCCAGAGAGCCTTCGGAAGCAACACCAGCT
GGACATGGAGGCGCTAAAGCAGGAGCTGCAGGTGCTATCTGAGAGGTACTCGCAGAAGTGCCTGGAGATC
GGGGCCCTGACAAGGCAGGCAGAAGAGCGTGAGCACACCCTGCGGCGCTGCCAGCAAGAGGGCCAGGAGC
TGCTGCGCCACAACCAGGAGCTGCACTCCCACCTGTCCGAGGAGATCGACCGTCTGCGCAGCTTCATCGC
CTCGCAGGGCACAGGCAACAGCTGCGGGCGCAGCAATGAGAGGAGTTCCTGTGAGCTGGAGGTGCTGCTG
CGAGTGAAGGAGAATGAACTCCAGTACCTGAAGAAGGAGGTGCAGTGTCTCCGAGATGAGCTCCAGGTGA
TACAGAAGGACAAGCGCTTCACGGGGAAGTACCAGGATGTGTACGTGGAGCTGAACCACATCAAGACTCG
GTCGGAGCGTGAGATCGAGCAGCTGAAGGAGCACCTGCGCCTGGCCATGGCTGCCCTGCAGGAGAAGGAG
GCTGTGAGGAACAGCTTGGCTGAGTAG

Translation (1968 aa):
MSMEQDTRALLPTQGTAWATASAPVARLQGPQGDSHQACSQEPHSPSSAEAPYCDLPRCPPALQNPLRTT
TCVGQSVHSLGLGLGQEPQRVWSPTTALPAEGPAAAPKNRHQDSEGIPYLEGLARSSCTDDNDNKDEDED
PNSNTSSSQDSNTPHDTSNSSSVDWDTTERPGVVPSRNRLTEMIPRRPQEGLRADSARKATRSPARGDTA
GQRKENSGSGGQSAGQHWAKLRSESGYFSLERQRSGQTQASSGTPPSGPRGTTQASSAQRDVFQAAPAQE
APQTSSLPRNTQRDTQRSTPRTSSPSRVSQRDTPRVMSTQRKNTPLSSPLRATPETLKISAPEDGTHVTP
SPCVQDSSLNRTSQRDSSRTPCIQWDNPRASSPNRTTQRDNPRTPCTQRDNPRASSPNRTTQRDNPRTPC
TQRDNPRASSPNRTTQRDNPRTPCAQRDNPRAASPNRSTQRDSPRTPCAQRDNPRASSPNRTAQRDNPRT
PCAQRDNPRTSCTSQNTPRTPSTQADKTTASCSKWEHLRSACTQRDNPRTFSQGCTQKDNPGPPSPRRAT
QGSNSRNPSPHRTNKDIPWASFPLRPTQSDSPRTSSPSRTKQNQVPWASISLRPTQGDKPQTSAPTRLAH
NDPPQQYSPSLATTSSSSHNPGHSSASRTSSPLHAAPRGAPQTSLESSQPPCTVCIGHRDAPRASSPPRY
FQYDPFPFFPDPRSSESESPHHEPPYMPPAVCIGHRDAPRATSPPRHTQFDPFPFLPDTSDADNESPQHD
PPQFPPPVCIGYRDAPRASSPPRQFPEPSFFQDLPRASTESLVPSTDSMHEPPHIPTPVCIGHRDAPSFS
SPPRQAPEPSLFFQDPPGTSMESLAPSIDSLHGCPLLPPQVCIGHRDAPRASSPPRHPPSDIGLLAPSPP
PGSSGSRGSAPPGETRHNLEREEYTMLADLPPPRRLAQRGPEPQAQGSNEGRTRSPGRAEVERLFGQERR
KSEAPGAFQTRDEGRSQRPSQAQSQLRRQSSPAPSRQVTKPSAKQAEPTRQSRTGPPHPKSPDKRPEGDR
QLQRTSPPARTPARPPERKAQIERHLESGHTGPRQSLGGWQSQERLSGPQSPNRHPEKSWGSQKEGPSLG
GWPELEGPSLEGIWRGPPQEHREQWGHSEAWEEPPSNGIQGAPPRGQGRLQELSRPHQPTPSSENSWAGP
AECSCALQPEASTAVGWRAEGTSPHQRSAERPPDLDWRDLLGLLRAPEDGAWTRLPRLDWEGLLELLQAR
LPQKDPARHWHDPAKASGPEQGSSGTEDTLKTEPQTQPEGRAKATLANGHRPGQQSESPAQLPSPACTST
QWPTTKVTSGPETSPLAALEQIDHLESHSPPDLEFQPEEPEASEPSRGEDSRAVQKQADSPDLLNFKKGW
MSILDEPGEWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEYAVQRNYGFQIHTKDAVYTL
SAMTSGIRRNWIEALRKTVRPTSAPDVTKLSDCNKENTLHGYGTQKSSLKIGEQRTGSEVIGRGGPRKAD
GPRPSLDYVELSPLAPSSPQRMRTLSRSTPERPTKQEDLERDLAQRSEERRKWFESTDGRTPETPSGDGS
RRGLGAPLTDDQQSRLSEEIEKKWQELEKLPLRENKRVPLTALLNQAHNDRRGPTSDSHEALEKEVQSLR
AQLEAWRLRGEAPQNAPRLQEDSHIPPGYISQEACERSLAEMESSHQQVMEQLQRHHERELQRLQQEKEW
LLAEETAATASAIEAMKKAYQEELSRELSKTRSLQQGPESLRKQHQLDMEALKQELQVLSERYSQKCLEI
GALTRQAEEREHTLRRCQQEGQELLRHNQELHSHLSEEIDRLRSFIASQGTGNSCGRSNERSSCELEVLL
RVKENELQYLKKEVQCLRDELQVIQKDKRFTGKYQDVYVELNHIKTRSEREIEQLKEHLRLAMAALQEKE
AVRNSLAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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