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Report for CCDS37435.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37435.1 Public Mus musculus 17 Map3k4 23 108 98 CCDS HistoryNCBI Gene:26407Re-query CCDS DB by CCDS ID:37435.1Re-query CCDS DB by GeneID:26407See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37435.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000089058.6 ENSMUSP00000086459.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089058.6Link to Ensembl Protein Viewer:ENSMUSP00000086459.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000089058Re-query CCDS DB by Protein ID:ENSMUSP00000086459
Original member Current member NCBI NM_011948.2 NP_036078.2 Accepted alive Link to Nucleotide Sequence:NM_011948.2Link to Protein Sequence:NP_036078.2Re-query CCDS DB by Nucleotide ID:NM_011948Re-query CCDS DB by Protein ID:NP_036078Link to BLAST:NP_036078.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036078.2 1597 O08648-1 1597 100% 0 0

Chromosomal Locations for CCDS 37435.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 12228100 12228120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12229517 12229696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12232412 12232518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12232914 12233036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12235051 12235210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12235899 12236015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12236981 12237051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12238039 12238230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12239379 12239459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12239970 12240070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12242650 12242805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12243500 12243596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12247303 12247369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12248053 12248131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12248904 12249037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12249497 12249658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12254082 12254231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12254997 12255263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12256591 12256674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12256762 12256861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12257914 12258030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12260451 12260608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12261244 12261390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12263906 12264148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12270863 12272220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12277921 12278111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 12318498 12318628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4794 nt):
ATGAGAGACGCCATCGCCGAGCCGGTGCCCCCTCCTGCCCTCGCCGACACCCCTGCAGCCGCCATGGAGG
AGCTGCGGCCAGCACCGCCGCCACAGCCCGAGCCGGATCCGGAGTGCTGCCCAGCGGCGAGGCAGGAGTG
CATGTTGGGAGAGTCGGCTCGCAAAAGTATGGAATCCGATCCAGAGGACTTTTCTGATGAAACAAATACA
GAGACTCTCTACGGCACCTCACCCCCAAGCACACCTCGACAGATGAAACGCCTGTCAGCCAAGCACCAGA
GGAACAGCGCAGGGAGGCCGGCCAGCCGATCGAACTTGAAAGAAAAAATGAACACACCGAGTCAGTCTCC
ACATAAAGATTTGGGGAAGGGAGTGGAGACCGTGGAAGAATACAGCTACAAGCAGGAGAAGAAGATTCGA
GCAACTCTGAGAACAACGGAGCGAGACCATAAGAAAAATGCACAGTGCTCGTTCATGTTGGACTCGGTGG
CTGGGTCTTTGCCAAAAAAATCGATTCCAGATGTGGATCTCAATAAGCCTTACCTCAGTCTCGGCTGTAG
CAATGCCAAGCTGCCCGTCTCGATGCCCATGCCGATAGCCAGAACTGCACGGCAGACTTCCCGGACTGAC
TGCCCCGCAGATCGCTTAAAGTTCTTTGAAACACTGCGCCTTTTGCTAAAGCTTACCTCAGTCTCGAAGA
AGAAGGACAGGGAGCAGAGGGGACAAGAAAACACGGCTGCTTTCTGGTTCAACCGATCGAACGAACTGAT
CTGGTTAGAACTGCAGGCCTGGCACGCGGGCCGCACCATCAATGACCAGGACCTCTTTCTCTACACAGCC
CGCCAGGCCATCCCAGACATCATCAATGAGATCCTCACCTTCAAAGTTAACTACGGGAGCATTGCCTTCT
CCAGCAATGGAGCCGGTTTCAACGGGCCCTTGGTAGAAGGCCAGTGCAGAACCCCTCAGGAGACAAACCG
TGTGGGCTGCTCATCGTACCACGAGCACCTCCAGCGCCAGAGGGTCTCGTTTGAGCAGGTGAAGCGGATA
ATGGAGCTGCTGGAGTACATGGAGGCACTTTACCCATCCTTGCAGGCTCTGCAGAAGGACTATGAACGGT
ACGCCGCCAAGGACTTTGAGGACAGAGTGCAGGCGCTCTGCCTGTGGCTCAACATCACGAAAGATCTAAA
TCAGAAGCTGCGGATCATGGGCACCGTGCTGGGCATCAAGAACCTATCAGACATTGGCTGGCCAGTGTTT
GAAATCCCCTCCCCTCGGCCGTCCAAGGGCTACGAGCCAGAGGACGAGGTCGAGGACACGGAGGTTGAGC
TGAGGGAGCTGGAGAGCGGGACGGAGGAGAGTGACGAGGAGCCAACCCCCAGTCCGAGGGTGCCAGAGCT
CAGGCTGTCCACAGACGCCATCTTGGACAGTCGCTCCCAGGGCTGCGTCTCCAGGAAGCTGGAGAGGCTC
GAGTCAGAGGAAGATTCCATAGGCTGGGGGACAGCGGACTGTGGCCCTGAAGCCAGCAGGCATTGTTTGA
CTTCTATCTATAGACCATTCGTGGACAAAGCACTGAAGCAAATGGGGCTAAGAAAGTTAATTTTACGACT
TCATAAGCTTATGAATGGGTCCTTGCAAAGAGCTCGTGTAGCTCTGGTGAAGGACGACCGTCCAGTGGAG
TTCTCTGACTTTCCAGGTCCCATGTGGGGCTCGGATTATGTGCAGTTGTCGGGAACACCTCCTTCCTCAG
AGCAGAAGTGTAGCGCTGTGTCCTGGGAAGAACTGAGAGCCATGGACCTGCCTTCCTTTGAGCCCGCCTT
CCTGGTGCTCTGTCGGGTCCTGCTGAACGTGATCCACGAGTGCCTGAAGCTGCGGCTGGAACAGAGGCCT
GCCGGGGAGCCTTCCCTCTTGAGTATCAAACAGCTAGTGCGAGAGTGTAAAGAGGTCCTAAAGGGCGGGC
TCCTGATGAAGCAGTATTACCAGTTCATGCTGCAGGAGGTCCTGGGCGGACTGGAGAAGACCGACTGCAA
CATGGATGCCTTTGAGGAGGACCTGCAGAAGATGCTGATGGTGTATTTTGATTACATGAGAAGCTGGATC
CAAATGCTACAGCAGTTACCTCAGGCTTCCCATAGCTTAAAAAACCTGCTAGAAGAGGAATGGAATTTCA
CCAAAGAAATAACCCATTATATCCGTGGCGGAGAAGCGCAGGCTGGAAAGCTTTTCTGTGACATCGCAGG
GATGCTGCTGAAATCCACAGGGAGCTTTCTGGAATCCGGCCTGCAGGAGAGCTGTGCTGAGCTGTGGACC
AGCGCCGACGACAACGGTGCTGCCGACGAGCTAAGGAGATCTGTCATCGAGATCAGCCGAGCACTCAAGG
AGCTCTTCCACGAAGCCAGGGAAAGAGCCTCCAAGGCCCTGGGCTTTGCTAAAATGCTGAGGAAGGACCT
AGAAATAGCAGCAGAGTTCGTGCTATCTGCATCAGCCCGAGAGCTCCTGGACGCTCTGAAAGCAAAGCAG
TATGTTAAGGTACAGATTCCCGGGTTAGAGAATTTGCACGTGTTTGTCCCCGACAGCCTCGCTGAGGAGA
AGAAAATTATTTTGCAGCTACTCAATGCTGCCACAGGAAAGGACTGCTCAAAGGATCCAGACGACGTCTT
CATGGATGCCTTCCTGCTCCTGACCAAGCATGGGGACCGAGCCCGTGACTCAGAAGATGGCTGGGGCACA
TGGGAAGCTCGGGCTGTCAAAATTGTGCCTCAGGTGGAGACTGTGGACACCCTGAGAAGCATGCAGGTGG
ACAACCTTCTGCTGGTTGTCATGGAGTCTGCTCACCTCGTACTTCAGAGAAAAGCCTTCCAGCAGTCCAT
TGAGGGGCTGATGACTGTACGCCATGAGCAGACATCTAGCCAGCCCATCATCGCCAAAGGTTTGCAGCAG
CTCAAGAACGATGCACTTGAGCTATGCAACAGAATCAGCGATGCCATCGACCGTGTGGACCACATGTTCA
CCCTGGAGTTCGATGCTGAGGTCGAGGAGTCTGAGTCGGCCACGCTGCAGCAGTACTACCGAGAAGCCAT
GATTCAGGGCTACAACTTTGGGTTTGAGTATCATAAAGAAGTTGTTCGTTTGATGTCTGGGGAATTCAGG
CAGAAGATAGGAGACAAATATATAAGCTTCGCCCAGAAGTGGATGAATTACGTGCTGACCAAATGCGAGA
GCGGCAGAGGCACAAGACCCAGATGGGCCACCCAAGGATTTGATTTCCTACAAGCCATTGAACCTGCCTT
TATTTCAGCTTTACCAGAAGATGACTTCTTGAGTTTGCAAGCCCTGATGAATGAGTGCATCGGGCACGTC
ATAGGAAAGCCACACAGCCCTGTCACAGCTATCCATCGGAACAGCCCCCGCCCTGTGAAGGTGCCCCGAT
GCCACAGTGACCCTCCTAACCCTCACCTCATCATCCCGACTCCAGAGGGATTCAGCACCCGGAGCGTGCC
TTCCGACGCTCGGACCCATGGCAACTCTGTTGCTGCTGCTGCTGCTGTTGCTGCCGCCGCCACCACTGCT
GCTGGCCGCCCTGGCCCAGGTGGTGGTGACTCTGTGCCAGCCAAACCTGTCAACACTGCCCCTGATACCA
GGGGTTCCAGTGTCCCTGAAAACGACCGCTTGGCCTCCATAGCTGCAGAACTGCAGTTCAGGTCTCTGAG
TCGGCACTCAAGCCCCACGGAAGAGCGAGACGAGCCAGCGTATCCTCGGAGTGACTCAAGTGGATCAACT
CGGAGAAGCTGGGAACTTCGAACACTCATCAGCCAGACCAAAGACTCGGCCTCTAAGCAGGGGCCCATAG
AAGCTATCCAGAAGTCAGTCCGACTGTTTGAAGAGAGGAGGTATCGAGAGATGAGGAGAAAGAATATCAT
CGGCCAAGTGTGCGATACCCCTAAGTCCTATGATAACGTCATGCATGTTGGACTGAGGAAGGTGACATTT
AAGTGGCAAAGAGGAAACAAAATTGGAGAAGGACAGTATGGAAAAGTATACACCTGCATCAGTGTTGACA
CAGGGGAGCTGATGGCCATGAAGGAGATTCGATTTCAGCCTAACGACCACAAGACTATCAAGGAGACTGC
AGACGAGTTGAAAATATTTGAAGGCATCAAGCACCCCAACCTGGTCCGGTATTTTGGCGTGGAGCTTCAC
AGGGAAGAGATGTACATCTTCATGGAGTACTGTGATGAGGGTACACTAGAGGAGGTGTCACGACTGGGCC
TGCAGGAGCACGTCATCAGGTTATATACCAAGCAGATCACTGTCGCCATCAACGTCCTCCATGAGCACGG
CATCGTTCACCGAGACATCAAAGGTGCCAATATCTTCCTTACGTCATCTGGACTAATCAAGCTGGGAGAT
TTTGGATGCTCTGTAAAACTTAAAAACAACGCCCAGACCATGCCCGGAGAGGTGAACAGCACCCTAGGGA
CAGCAGCTTACATGGCCCCTGAAGTTATTACCCGAGCCAAAGGAGAAGGCCACGGACGTGCGGCAGATAT
CTGGAGTCTGGGGTGCGTCGTCATAGAGATGGTGACTGGCAAGCGGCCTTGGCATGAGTATGAACACAAC
TTTCAGATTATGTACAAGGTGGGGATGGGACACAAGCCACCAATCCCGGAAAGGCTAAGCCCTGAAGGAA
AGGCCTTTCTCTCGCACTGCCTGGAAAGTGACCCGAAGATACGGTGGACAGCCAGCCAGCTCCTCGACCA
CGCTTTTGTCAAGGTTTGCACAGATGAAGAGTGA

Translation (1597 aa):
MRDAIAEPVPPPALADTPAAAMEELRPAPPPQPEPDPECCPAARQECMLGESARKSMESDPEDFSDETNT
ETLYGTSPPSTPRQMKRLSAKHQRNSAGRPASRSNLKEKMNTPSQSPHKDLGKGVETVEEYSYKQEKKIR
ATLRTTERDHKKNAQCSFMLDSVAGSLPKKSIPDVDLNKPYLSLGCSNAKLPVSMPMPIARTARQTSRTD
CPADRLKFFETLRLLLKLTSVSKKKDREQRGQENTAAFWFNRSNELIWLELQAWHAGRTINDQDLFLYTA
RQAIPDIINEILTFKVNYGSIAFSSNGAGFNGPLVEGQCRTPQETNRVGCSSYHEHLQRQRVSFEQVKRI
MELLEYMEALYPSLQALQKDYERYAAKDFEDRVQALCLWLNITKDLNQKLRIMGTVLGIKNLSDIGWPVF
EIPSPRPSKGYEPEDEVEDTEVELRELESGTEESDEEPTPSPRVPELRLSTDAILDSRSQGCVSRKLERL
ESEEDSIGWGTADCGPEASRHCLTSIYRPFVDKALKQMGLRKLILRLHKLMNGSLQRARVALVKDDRPVE
FSDFPGPMWGSDYVQLSGTPPSSEQKCSAVSWEELRAMDLPSFEPAFLVLCRVLLNVIHECLKLRLEQRP
AGEPSLLSIKQLVRECKEVLKGGLLMKQYYQFMLQEVLGGLEKTDCNMDAFEEDLQKMLMVYFDYMRSWI
QMLQQLPQASHSLKNLLEEEWNFTKEITHYIRGGEAQAGKLFCDIAGMLLKSTGSFLESGLQESCAELWT
SADDNGAADELRRSVIEISRALKELFHEARERASKALGFAKMLRKDLEIAAEFVLSASARELLDALKAKQ
YVKVQIPGLENLHVFVPDSLAEEKKIILQLLNAATGKDCSKDPDDVFMDAFLLLTKHGDRARDSEDGWGT
WEARAVKIVPQVETVDTLRSMQVDNLLLVVMESAHLVLQRKAFQQSIEGLMTVRHEQTSSQPIIAKGLQQ
LKNDALELCNRISDAIDRVDHMFTLEFDAEVEESESATLQQYYREAMIQGYNFGFEYHKEVVRLMSGEFR
QKIGDKYISFAQKWMNYVLTKCESGRGTRPRWATQGFDFLQAIEPAFISALPEDDFLSLQALMNECIGHV
IGKPHSPVTAIHRNSPRPVKVPRCHSDPPNPHLIIPTPEGFSTRSVPSDARTHGNSVAAAAAVAAAATTA
AGRPGPGGGDSVPAKPVNTAPDTRGSSVPENDRLASIAAELQFRSLSRHSSPTEERDEPAYPRSDSSGST
RRSWELRTLISQTKDSASKQGPIEAIQKSVRLFEERRYREMRRKNIIGQVCDTPKSYDNVMHVGLRKVTF
KWQRGNKIGEGQYGKVYTCISVDTGELMAMKEIRFQPNDHKTIKETADELKIFEGIKHPNLVRYFGVELH
REEMYIFMEYCDEGTLEEVSRLGLQEHVIRLYTKQITVAINVLHEHGIVHRDIKGANIFLTSSGLIKLGD
FGCSVKLKNNAQTMPGEVNSTLGTAAYMAPEVITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHN
FQIMYKVGMGHKPPIPERLSPEGKAFLSHCLESDPKIRWTASQLLDHAFVKVCTDEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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