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Report for CCDS39697.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39697.1 Public Mus musculus 6 Abcc9 23 108 98 CCDS HistoryNCBI Gene:20928Re-query CCDS DB by CCDS ID:39697.1Re-query CCDS DB by GeneID:20928See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39697.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073173.11 ENSMUSP00000072914.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073173.11Link to Ensembl Protein Viewer:ENSMUSP00000072914.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000073173Re-query CCDS DB by Protein ID:ENSMUSP00000072914
Original member Current member EBI ENSMUST00000205202.2 ENSMUSP00000144779.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000205202.2Link to Ensembl Protein Viewer:ENSMUSP00000144779.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000205202Re-query CCDS DB by Protein ID:ENSMUSP00000144779
Original member NCBI NM_021042.2 NP_066379.2 Updated not alive Link to Nucleotide Sequence:NM_021042.2Link to Protein Sequence:NP_066379.2Re-query CCDS DB by Nucleotide ID:NM_021042Re-query CCDS DB by Protein ID:NP_066379
Current member NCBI NM_021042.3 NP_066379.2 Accepted alive Link to Nucleotide Sequence:NM_021042.3Link to Protein Sequence:NP_066379.2Re-query CCDS DB by Nucleotide ID:NM_021042Re-query CCDS DB by Protein ID:NP_066379Link to BLAST:NP_066379.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066379.2 1511 P70170-3 1511 100% 0 0

Chromosomal Locations for CCDS 39697.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 142594005 142594142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142594709 142594771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142598108 142598241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142599054 142599157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142600908 142601016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142601776 142601854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142603047 142603177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142604830 142604950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142605819 142605920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142614414 142614516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142620683 142620775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142625937 142626094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142627189 142627258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142627473 142627621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142628423 142628652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142633085 142633181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142639192 142639317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142639448 142639585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142644275 142644355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142645886 142645970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142646272 142646373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142648027 142648065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142652527 142652632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142656603 142656675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142664532 142664640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142671541 142671683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142672595 142672635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142675401 142675563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142679219 142679353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142681989 142682144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142682859 142683017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142685000 142685182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142687199 142687441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142688964 142689130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142692781 142692902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142694477 142694618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 142697679 142697820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4536 nt):
ATGAGCCTTTCTTTTTGTGGGAACAACATCTCCTCCTACAACATCTATTATGGTGTTCTCCAAAACCCCT
GCTTTGTGGACGCACTCAACCTGGTCCCACATGTCTTCCTGCTGTTTATCACCTTTCCAATACTGTTCAT
TGGATGGGGGAGCCAAAGCTCAAAAGTGCAAATTCATCATAACACGTGGCTTCATTTTCCCGGACACAAC
CTGAGATGGATTCTGACGTTTGCGCTCCTGTTTGTGCATGTTTGTGAGATAGCGGAAGGCATCGTTTCAG
ACTCGCATCGGGCGTCCAGGCATCTCCACCTTTTCATGCCGGCTGTGATGGGATTTGTCGCCACAACAAC
GTCCATCGTCTATTATCATAACATTGAAACATCAAATTTCCCTAAATTACTTTTAGCTTTATTCCTGTAC
TGGGTAATGGCCTTTATTACAAAGACGATAAAGTTGGTCAAATACTGGCAGTTGGGGTGGGGAGTGTCAG
ACCTGCGCTTCTGCATCACAGGAGTGATGGTCATCTTGAATGGGCTGCTGATGGCTGTGGAGATCAATGT
CATCCGGGTCAGAAGATATGTTTTCTTCATGAATCCCCAGAAAGTGAAGCCTCCGGAAGACCTCCAGGAC
CTGGGCGTGAGGTTCCTCCAGCCATTTGTGAATTTACTGTCCAAAGCTACTTACTGGTGGATGAACACAC
TTATCATATCAGCTCACAGGAAACCTATCGATCTGAAGGCGATTGGAAAGTTGCCGATAGCGATGAGGGC
GGTGACCAATTATGTCTGCCTAAAGGAAGCCTATGAAGAGCAGAAGAAAAAGGCTGCCGATCATCCAAAT
CGGACTCCCTCCATATGGCTGGCCATGTACAGAGCTTTTGGGAGACCAATCCTGCTGAGCAGCACATTCC
GGTACTTGGCTGACTTGCTGGGGTTTGCTGGTCCTCTTTGTATATCTGGGATAGTCCAGCGAGTAAATGA
AAAGACTAACACAACAAGAGAAATGTTTCCAGAGACACTCTCATCAAAGGAATTTCTGGAAAACGCCCAT
GTGCTGGCTGTCCTGCTTTTCCTGGCCCTTATCCTACAGAGGACCTTTCTGCAGGCTTCCTACTATGTGA
CCATAGAGACCGGCATCAACCTCCGTGGGGCTCTGCTGGCTATGATATACAATAAAATCCTTCGGCTCTC
GACTTCTAACCTATCCATGGGTGAGATGACCCTGGGACAGATCAACAACTTGGTTGCCATAGAAACCAAT
CAGCTCATGTGGTTCTTGTTCCTGTGTCCCAATCTGTGGGCCATGCCTGTTCAGATCATAATGGGGGTGA
TCCTGCTCTACAATTTGCTTGGGTCGAGTGCACTGGTTGGCGCTGCAGTCATTGTGCTCCTTGCACCGAT
TCAGTACTTCATTGCCACGAAGCTGGCGGAGGCTCAGAAGAGCACTCTGGATTATTCCACCGAGAGGTTG
AAGAAGACGAATGAGATACTGAAGGGCATCAAACTCCTTAAGCTGTACGCCTGGGAGCACATTTTCTGCA
AGAGCGTGGAGGAGACACGAATGAAGGAGCTCTCCAGCCTCAAAACCTTCGCGCTCTACACGTCACTTTC
CATCTTCATGAACGCAGCAATTCCCATCGCAGCTGTTCTTGCGACATTTGTGACACATGCGTACGCCAGT
GGAAACAACCTGAAGCCTGCAGAGGCCTTTGCCTCTCTGTCTCTCTTCCACATCCTCGTCACACCGCTCT
TCCTGCTGTCCACGGTGGTCAGATTCGCAGTCAAAGCCATCATCAGTGTTCAAAAGCTGAATGAGTTTCT
CTTGAGCGATGAGATTGGTGAGGACAGCTGGAGGGCCGGGGAGGGCACGCTGCCTTTCGAGTCCTGTAAG
AAGCACACCGGAGTGGTGACAAATGGATACTTCTCATGGGGCAGTGGTTTAGCTACATTGTCCAATATTG
ACATTCGAATTCCAACAGGTCAGCTAACCATGATTGTAGGCCAAGTGGGTTGTGGAAAATCATCTCTTCT
CCTTGCCATCCTTGGTGAGATGCAGACCCTGGAAGGAAAAGTTTACTGGAACAATGTAAATGAATCTGAG
CCTTCTTTTGAAGCAACCCGAAGCAGAAGCAGGTATTCTGTGGCTTACGCTGCCCAGAAGCCTTGGCTCC
TAAATGCTACAGTTGAGGAAAATATCACTTTTGGAAGTCCTTTCAACAGACAGAGGTACAAGGCTGTCAC
CGATGCCTGCTCTCTTCAGCCAGACATTGATTTGCTACCATTTGGAGACCAAACTGAAATCGGAGAGAGG
GGCATCAACCTGAGTGGGGGTCAGAGGCAGAGAATCTGCGTGGCACGGGCACTCTACCAAAACACCAACA
TCGTCTTTTTGGACGACCCATTCTCTGCCCTGGACATCCACCTGAGCGATCATTTGATGCAGGAAGGAAT
CCTGAAGTTTCTCCAGGATGACAAGAGGACGGTTGTTCTTGTGACGCACAAACTGCAGTACCTGACGCAC
GCTGACTGGATCATAGCCATGAAGGATGGCAGTGTGTTAAGGGAAGGGACTTTGAAAGACATTCAGACCA
AAGACGTGGAGCTTTATGAACACTGGAAAACCCTCATGAATAGACAGGATCAAGAATTAGAAAAGGACAT
GGAAGCAGACCAAACAACACTGGAGAGGAAGACTCTCCGGAGAGCCATGTATTCAAGAGAGGCCAAGGCA
CAGATGGAGGATGAAGATGAAGAGGAGGAAGAGGAGGAAGATGAGGAAGATAACATGTCAACGGTGATGA
GGCTCAGGACCAAGATGCCCTGGAAGACCTGCTGGTGGTACCTCACTTCAGGAGGGTTTTTTCTGCTCTT
CCTCATGATCTTCTCCAAGCTTTTGAAGCACTCGGTGATTGTGGCTATAGACTACTGGCTAGCTACGTGG
ACATCCGAATACAGTATAAACCATCCTGGAAAAGCTGACCAGACCTTCTATGTGGCTGGGTTCAGCATCC
TCTGTGGAGCAGGCATTTTCCTTTGCCTCGTCACCTCCCTCACCGTGGAATGGATGGGCCTCACAGCCGC
CAAGAACCTCCACCACAACCTCCTCAATAAGATAATTCTCGGGCCAATAAGGTTCTTTGATACCACACCG
CTGGGGCTGATCCTCAATCGGTTTTCTGCTGATACGAACATCATCGACCAGCATATCCCTCCGACCTTGG
AGTCGCTGACGCGCTCCACCCTGCTCTGCCTGTCTGCTATTGGGATGATCTCCTATGCTACACCCGTGTT
TCTCGTCGCCCTTGCGCCCCTGGGTGTAGCCTTTTATTTCATCCAGAAATACTTCCGGGTTGCCTCTAAG
GATCTCCAGGAACTTGACGACAGCACCCAGCTCCCCCTGCTTTGTCACTTCTCAGAAACAGCTGAAGGGC
TCACCACTATCCGGGCCTTCAGGCATGAAACCAGATTCAAGCAACGCATGCTGGAGCTGACAGACACGAA
CAACATTGCCTACTTATTTCTCTCAGCAGCCAACAGATGGCTGGAGGTCAGGACGGACTATCTGGGAGCG
TGCATTGTTCTGACAGCCTCCATTGCATCCATTAGTGGCTCTTCCAACTCTGGACTGGTGGGCTTGGGCC
TTCTCTATGCCCTCACGATAACCAATTACCTAAATTGGGTTGTAAGGAACTTGGCCGACCTGGAAGTCCA
GATGGGTGCAGTGAAGAAAGTGAACAGTTTCTTGACTATGGAGTCCGAGAACTATGAAGGCACCATGGAT
CCTTCTCAAGTCCCAGAGCACTGGCCACAGGAAGGCGAGATCAAGATTCACGATCTGTGTGTCAGATATG
AAAATAACCTGAAGCCCGTTCTGAAACATGTCAAGGCTTACATCAAACCCGGGCAGAAGGTGGGCATCTG
TGGTCGAACTGGCAGTGGGAAGTCCTCCTTATCCCTGGCTTTCTTCAGAATGGTCGACATATTTGACGGA
AAGATAGTCATTGATGGGATAGACATCTCCAAACTGCCCTTGCACACGCTCCGCTCCAGGCTGTCCATCA
TTCTCCAGGACCCAATCCTGTTCAGCGGCTCCATCAGGTTTAACCTGGATCCTGAATGCAAGTGCACAGA
TGACAGGCTCTGGGAGGCTCTAGAAATTGCCCAGCTGAAGAATATGGTCAAATCTCTGCCCGGAGGCTTA
GATGCCACTGTCACCGAAGGTGGTGAGAACTTCAGTGTTGGACAGAGACAGCTGTTCTGCCTGGCCAGGG
CCTTTGTTCGGAAGAGCAGTATACTCATCATGGATGAAGCCACTGCTTCCATCGACATGGCCACGGAAAA
CATTTTGCAGAAAGTAGTCATGACAGCCTTTGCGGATCGCACGGTCGTAACCATAGCTCACCGTGTCTCT
TCTATTGTGGATGCAGGCCTTGTTTTAGTCTTTTCTGAGGGTATTTTAGTGGAGTGTGATACTGGTCCAA
ACCTGCTCCAGCACAAGAATGGCCTCTTTTCTACTTTGGTGATGACCAACAAGTAG

Translation (1511 aa):
MSLSFCGNNISSYNIYYGVLQNPCFVDALNLVPHVFLLFITFPILFIGWGSQSSKVQIHHNTWLHFPGHN
LRWILTFALLFVHVCEIAEGIVSDSHRASRHLHLFMPAVMGFVATTTSIVYYHNIETSNFPKLLLALFLY
WVMAFITKTIKLVKYWQLGWGVSDLRFCITGVMVILNGLLMAVEINVIRVRRYVFFMNPQKVKPPEDLQD
LGVRFLQPFVNLLSKATYWWMNTLIISAHRKPIDLKAIGKLPIAMRAVTNYVCLKEAYEEQKKKAADHPN
RTPSIWLAMYRAFGRPILLSSTFRYLADLLGFAGPLCISGIVQRVNEKTNTTREMFPETLSSKEFLENAH
VLAVLLFLALILQRTFLQASYYVTIETGINLRGALLAMIYNKILRLSTSNLSMGEMTLGQINNLVAIETN
QLMWFLFLCPNLWAMPVQIIMGVILLYNLLGSSALVGAAVIVLLAPIQYFIATKLAEAQKSTLDYSTERL
KKTNEILKGIKLLKLYAWEHIFCKSVEETRMKELSSLKTFALYTSLSIFMNAAIPIAAVLATFVTHAYAS
GNNLKPAEAFASLSLFHILVTPLFLLSTVVRFAVKAIISVQKLNEFLLSDEIGEDSWRAGEGTLPFESCK
KHTGVVTNGYFSWGSGLATLSNIDIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVYWNNVNESE
PSFEATRSRSRYSVAYAAQKPWLLNATVEENITFGSPFNRQRYKAVTDACSLQPDIDLLPFGDQTEIGER
GINLSGGQRQRICVARALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTVVLVTHKLQYLTH
ADWIIAMKDGSVLREGTLKDIQTKDVELYEHWKTLMNRQDQELEKDMEADQTTLERKTLRRAMYSREAKA
QMEDEDEEEEEEEDEEDNMSTVMRLRTKMPWKTCWWYLTSGGFFLLFLMIFSKLLKHSVIVAIDYWLATW
TSEYSINHPGKADQTFYVAGFSILCGAGIFLCLVTSLTVEWMGLTAAKNLHHNLLNKIILGPIRFFDTTP
LGLILNRFSADTNIIDQHIPPTLESLTRSTLLCLSAIGMISYATPVFLVALAPLGVAFYFIQKYFRVASK
DLQELDDSTQLPLLCHFSETAEGLTTIRAFRHETRFKQRMLELTDTNNIAYLFLSAANRWLEVRTDYLGA
CIVLTASIASISGSSNSGLVGLGLLYALTITNYLNWVVRNLADLEVQMGAVKKVNSFLTMESENYEGTMD
PSQVPEHWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDG
KIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGL
DATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVS
SIVDAGLVLVFSEGILVECDTGPNLLQHKNGLFSTLVMTNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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