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Report for CCDS39706.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
39706.1 |
Public |
Mus musculus |
6 |
Etfrf1 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:67636](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:39706.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:67636](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 6 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 39706.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000039729.4 |
ENSMUSP00000039433.3 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000039729.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000039433.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000039729](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000039433](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000111719.1 |
ENSMUSP00000107348.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000111719.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000107348.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000111719](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000107348](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000111721.1 |
ENSMUSP00000107350.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000111721.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000107350.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000111721](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000107350](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000111723.7 |
ENSMUSP00000107352.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000111723.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000107352.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000111723](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000107352](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000111724.7 |
ENSMUSP00000107353.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000111724.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000107353.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000111724](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000107353](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000111725.7 |
ENSMUSP00000107354.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000111725.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000107354.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000111725](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000107354](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000111726.9 |
ENSMUSP00000107355.3 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000111726.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000107355.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000111726](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000107355](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001163628.1 |
NP_001157100.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001163628.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001157100.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001163628](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001157100](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001157100.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362053.1 |
NP_001348982.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362053.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001348982.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362053](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001348982](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001348982.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362054.1 |
NP_001348983.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362054.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001348983.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362054](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001348983](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001348983.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362055.1 |
NP_001348984.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362055.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001348984.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362055](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001348984](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001348984.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362056.1 |
NP_001348985.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362056.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001348985.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362056](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001348985](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001348985.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362057.1 |
NP_001348986.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362057.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001348986.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362057](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001348986](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001348986.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362058.1 |
NP_001348987.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362058.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001348987.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362058](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001348987](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001348987.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001362059.1 |
NP_001348988.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001362059.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001348988.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001362059](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001348988](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001348988.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_133688.3 |
NP_598449.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_133688.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_598449.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_133688](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_598449](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_598449.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 39706.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (261 nt): ATGGCCAATTCGTTACGAGGAGAAGTACTGACTCTTTATAAAAATCTGCTGTATCTTGGACGGGACTATC CAAAAGGAGCAGACTATTTTAAAAGGCGTTTGAAGAACGTTTTCCTTAAAAACAAGGATGTGGAGGACCC AGAGAAGATCAAAGAACTTATCGCACGAGGAGAATTTGTAATGAAGGAGCTAGAGGCCTTGTACTTCCTT AGGAAATACAGAGCTATGAAGCAACGTTACTATTCAGATACCAAAGTCTGA
Translation (86 aa): MANSLRGEVLTLYKNLLYLGRDYPKGADYFKRRLKNVFLKNKDVEDPEKIKELIARGEFVMKELEALYFL RKYRAMKQRYYSDTKV
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