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Report for CCDS39999.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39999.1 Public Mus musculus 7 Fes 23 108 98 CCDS HistoryNCBI Gene:14159Re-query CCDS DB by CCDS ID:39999.1Re-query CCDS DB by GeneID:14159See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39999.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080932.7 ENSMUSP00000079733.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080932.7Link to Ensembl Protein Viewer:ENSMUSP00000079733.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000080932Re-query CCDS DB by Protein ID:ENSMUSP00000079733
Original member Current member NCBI NM_010194.2 NP_034324.2 Accepted alive Link to Nucleotide Sequence:NM_010194.2Link to Protein Sequence:NP_034324.2Re-query CCDS DB by Nucleotide ID:NM_010194Re-query CCDS DB by Protein ID:NP_034324Link to BLAST:NP_034324.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034324.2 822 P16879 822 100% 0 0

Chromosomal Locations for CCDS 39999.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 80377932 80378074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80378542 80378664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80378778 80378935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80379611 80379734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80379818 80379912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80380209 80380327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80380839 80380892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80381165 80381287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80381601 80381810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80382313 80382396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80382521 80382707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80382811 80382933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80383070 80383189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80383269 80383406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80383834 80384017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80384191 80384287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80386811 80386984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80387122 80387334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2469 nt):
ATGGGCTTCTCTTCAGAGCTGTGCAGCCCCCAGGGCCACGGGGCAGTGCAGCAGATGCAGGAAGCTGAGC
TGCGCTTATTGGAGGGCATGAGGAAGTGGATGGCCCAGAGGGTCAAGAGTGACCGGGAATATGCAGGATT
GCTTCACCACATGTCCTTGCAGGACAGCGGAGGCCAGAGCTGGAGCAGCGGCCCCGACAGCCCTGTCAGC
CAGTCCTGGGCAGAGATAACAAGCCAGACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGCAGAAGATC
TGAACTCGGGGCCCTTGAGCAAACTGAGCGTGCTGATCCGGGAGCGGCAGCACCTGAGAAAGACGTACAA
CGAGCAGTGGCAGCAGCTGCAGCAGGAGCTCACCAAGACCCACAGCCAGGACATTGAGAAGCTGAAGACT
CAGTACCGGACCCTGGTACGAGATAGCACCCAGGCCAGGCGCAAGTACCAGGAAGCCAGCAAAGACAAGG
ATCGAGACAAGGCCAAAGACAAGTATGTCCGGAGCCTGTGGAAGCTCTTTGCCCACCACAACCGCTACGT
CCTGGGTGTGAGGGCCGCACAGCTGCACCACCACCACCACCACCGGTTCATGCTGCCTGGCCTGCTGCAG
TCACTGCAGGATTTGCACGAGGAGATGGCGGGCATTCTGAAGGACATCCTGCAGGAATACCTGGAGATTA
GCAGTCTGGTGCAGGACGATGTGGCATCCATTCACCGTGAGCTGGCTGCAGCTGCTGCTCGGATCCAGCC
TGAGTTTGAGTACCTAGGCTTCCTGCGACAATATGGATCCACCCCTGATGTGCCACCTTGTGTCACTTTT
GATGAGTCGCTTCTTGAAGACGGGGAACAGCTGGAGCCAGGGGAGCTGCAGCTGAACGAGTTGACCTTGG
AGAGCGTGCAACACACGCTGACTTCTGTGACAGATGAACTGGCTGTGGCCACCAAAGAGGTGCTGAGCCG
GCAGGAGATGGTCAGTCAGCTGCAGCGTGAGCTCCAAAGTGAGGAACAGAACACCCACCCCCGGGAACGG
GTGCAGCTTCTGAGCAAGAGGCAGATGCTGCAAGAGGCAATACAAGGGTTGCAGATAGCACTGTGCAGCC
AGGACAAGCTTCAGGCCCAGCAGGAACTTCTGCAGAGCAAGATGGAGCAGCTCGGCACGGGCGAGCCCCC
AGCCGTGCCGCTCCTTCAGGATGACCGCCATTCCACCTCCTCCACGGAGCAGGAGCGAGAGGGGGGAAGG
ACACCCACACTGGAGATCCTTAAAAGCCACTTCTCCGGAATCTTCCGCCCCAAGTTCTCTATCCCTCCAC
CACTGCAGCTCGTGCCGGAGGTGCAGAAGCCTCTCTATGAGCAGCTGTGGTACCACGGGGCTATCCCTCG
GGCAGAGGTAGCTGAGCTGCTAACACACTCCGGGGACTTCCTGGTTCGGGAGAGCCAGGGCAAGCAGGAG
TATGTACTGTCTGTGATGTGGGATGGCCAGCCCCGACATTTCATCATCCAGTCCTCAGATAACCTGTACC
GGCTGGAAGGGGATGGCTTCCCCAGCATACCTCTGCTCATCACTCACCTGCTGTCCTCCCAGCAACCCCT
TACAAAGAAGAGTGGTGTTGTCCTGTTCAGGGCGGTGCCCAAGGACAAGTGGGTTCTGAAGCACGAGGAC
CTGGTGCTGGGAGAGCAGATCGGAAGGGGGAACTTCGGAGAGGTGTTTAGTGGCCGCCTTCGTGCAGACA
ATACCCCGGTGGCTGTGAAGTCTTGCCGAGAGACACTCCCACCTGACCTCAAGGCCAAGTTTCTGCAAGA
AGCAAGGATCCTGAAACAGTACAACCACCCCAACATTGTGCGTCTCATCGGGGTCTGCACACAGAAACAG
CCGATCTACATCGTCATGGAGCTCGTTCAAGGGGGCGACTTTCTCACCTTCCTGCGGACAGAGGGAGCCC
GCCTGCGGGTGAAGACTCTGCTGCAGATGGTAGGGGACGCAGCTGCTGGCATGGAATACTTGGAAAGCAA
GTGTTGTATCCACAGGGACCTGGCTGCTCGGAACTGCCTGGTGACAGAGAAGAATGTCCTGAAGATCAGC
GACTTTGGGATGTCCCGCGAAGAAGCTGATGGGATCTATGCCGCCTCAGCGGGCCTCAGACAAGTCCCTG
TTAAGTGGACTGCCCCTGAGGCCCTTAACTACGGACGCTACTCCTCAGAGAGTGATGTGTGGAGCTTTGG
CATTTTGCTGTGGGAGACCTTCAGCCTGGGGGCCTCACCCTATCCCAACCTCACCAATCAGCAGACACGG
GAGTTTGTAGAAAAGGGGCATCGTCTGCCTTGCCCAGAGCTGTGCCCTGATGCGGTCTTCAGGCTCATGG
AGCAGTGCTGGGCCTATGAGCCTGGGCAGAGACCTAGTTTCAGCATCATCTGCCAGGAGCTCCACAGTAT
CCGCAAGCGGCATCGGTGA

Translation (822 aa):
MGFSSELCSPQGHGAVQQMQEAELRLLEGMRKWMAQRVKSDREYAGLLHHMSLQDSGGQSWSSGPDSPVS
QSWAEITSQTENLSRVLRQHAEDLNSGPLSKLSVLIRERQHLRKTYNEQWQQLQQELTKTHSQDIEKLKT
QYRTLVRDSTQARRKYQEASKDKDRDKAKDKYVRSLWKLFAHHNRYVLGVRAAQLHHHHHHRFMLPGLLQ
SLQDLHEEMAGILKDILQEYLEISSLVQDDVASIHRELAAAAARIQPEFEYLGFLRQYGSTPDVPPCVTF
DESLLEDGEQLEPGELQLNELTLESVQHTLTSVTDELAVATKEVLSRQEMVSQLQRELQSEEQNTHPRER
VQLLSKRQMLQEAIQGLQIALCSQDKLQAQQELLQSKMEQLGTGEPPAVPLLQDDRHSTSSTEQEREGGR
TPTLEILKSHFSGIFRPKFSIPPPLQLVPEVQKPLYEQLWYHGAIPRAEVAELLTHSGDFLVRESQGKQE
YVLSVMWDGQPRHFIIQSSDNLYRLEGDGFPSIPLLITHLLSSQQPLTKKSGVVLFRAVPKDKWVLKHED
LVLGEQIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYNHPNIVRLIGVCTQKQ
PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKIS
DFGMSREEADGIYAASAGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLTNQQTR
EFVEKGHRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSIICQELHSIRKRHR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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