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Report for CCDS40125.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40125.1 Public Mus musculus 7 Atp2a1 23 108 98 CCDS HistoryNCBI Gene:11937Re-query CCDS DB by CCDS ID:40125.1Re-query CCDS DB by GeneID:11937See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40125.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032974.12 ENSMUSP00000032974.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032974.12Link to Ensembl Protein Viewer:ENSMUSP00000032974.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000032974Re-query CCDS DB by Protein ID:ENSMUSP00000032974
Original member Current member NCBI NM_007504.2 NP_031530.2 Accepted alive Link to Nucleotide Sequence:NM_007504.2Link to Protein Sequence:NP_031530.2Re-query CCDS DB by Nucleotide ID:NM_007504Re-query CCDS DB by Protein ID:NP_031530Link to BLAST:NP_031530.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031530.2 994 Q8R429 994 100% 0 0

Chromosomal Locations for CCDS 40125.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 126446582 126446586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126446871 126446988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126447137 126447254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126447383 126447516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126447602 126447687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126447861 126448063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126448162 126448382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126448537 126448872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126450105 126450323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126450425 126450550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126452655 126452786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126453023 126453125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126453362 126453450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126456377 126456543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126456720 126457017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126457114 126457199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126457908 126457988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126459579 126459717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126460697 126460801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126462105 126462187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126462500 126462517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126462805 126462922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2985 nt):
ATGGAGGCCGCGCACTCCAAGTCCACAGAGGAATGTTTGTCCTATTTCGGGGTGAGCGAGACCACAGGCC
TTACCCCAGACCAAGTTAAGCGACATCTGGAAAAATACGGCCCCAATGAGCTCCCTGCTGAGGAAGGCAA
GTCTCTGTGGGAGTTGGTGGTAGAGCAGTTCGAAGACCTGCTTGTGCGGATTCTTCTCCTGGCTGCCTGC
ATTTCCTTTGTGCTGGCCTGGTTTGAGGAAGGCGAAGAAACCGTCACTGCCTTTGTGGAACCTTTTGTCA
TTCTCTTGATCCTCATTGCCAACGCCATTGTGGGGGTTTGGCAGGAACGGAATGCAGAGAACGCTATCGA
AGCGCTGAAAGAATATGAACCCGAGATGGGAAAGGTCTATCGGGCTGACCGAAAGTCAGTGCAAAGGATC
AAGGCTCGGGACATCGTTCCTGGGGACATCGTGGAGGTGGCCGTTGGGGACAAAGTCCCTGCAGACATCC
GCATCCTCTCCATCAAATCCACCACCCTCCGGGTCGACCAGTCCATCCTGACAGGAGAGTCTGTGTCTGT
CATCAAGCACACAGACCCTGTCCCTGACCCCCGAGCTGTCAACCAGGACAAGAAGAACATGCTCTTCTCA
GGTACCAACATCGCAGCCGGCAAGGCTGTAGGCATCGTGGCCACCACTGGTGTGAGTACTGAGATTGGCA
AGATCCGAGACCAGATGGCTGCCACCGAGCAGGACAAGACTCCACTGCAGCAGAAGCTTGACGAGTTTGG
GGAGCAGCTGTCCAAGGTCATCTCTCTCATCTGTGTGGCTGTCTGGCTTATCAACATTGGCCACTTCAAC
GATCCTGTCCATGGGGGCTCCTGGTTCCGGGGTGCCATTTACTACTTCAAGATTGCTGTGGCCTTGGCTG
TGGCGGCCATCCCAGAAGGGCTTCCTGCTGTCATCACCACCTGCTTGGCTTTGGGTACCCGCCGGATGGC
AAAGAAGAACGCCATCGTGAGGAGTCTGCCCTCTGTGGAGACCCTGGGCTGTACCTCTGTCATCTGTTCT
GACAAAACAGGGACCCTCACCACCAACCAGATGTCAGTTTGCAAGATGTTCATCATTGACAAGGTGGATG
GGGATGTCTGCTCACTGAACGAGTTCTCCATCACTGGCTCTACTTATGCTCCTGAGGGAGAGGTCTTGAA
GAATGATAAGCCAGTCCGAGCAGGGCAGTATGATGGGCTGGTGGAGCTCGCTACCATCTGTGCCCTCTGC
AATGATTCCTCCTTGGACTTTAATGAGACCAAAGGTGTCTATGAGAAGGTGGGCGAGGCCACGGAGACTG
CTCTCACCACCTTGGTGGAGAAGATGAACGTATTCAACACGGAAGTGAGAAGCCTCTCTAAAGTGGAGCG
GGCCAACGCCTGCAATTCGGTGATCCGCCAACTCATGAAGAAGGAATTCACCCTGGAATTTTCCCGAGAC
AGGAAGTCTATGTCTGTCTACTGTTCACCAGCTAAGTCCTCACGGGCTGCCGTGGGCAACAAGATGTTTG
TCAAGGGTGCCCCCGAGGGGGTCATCGACCGCTGTAACTATGTGCGTGTTGGCACGACCCGTGTGCCATT
GACAGGCCCCGTGAAGGAGAAGATCATGTCTGTGATCAAGGAGTGGGGCACTGGTCGGGACACACTGCGG
TGCCTGGCGCTGGCCACCCGCGACACGCCCCCCAAACGCGAGGAGATGGTTCTGGATGATTCAGCCAAGT
TCATGGAGTATGAGATGGACCTGACGTTTGTTGGTGTTGTGGGCATGTTGGATCCACCCCGCAAGGAGGT
CACAGGCTCTATCCAGCTGTGTCGTGATGCTGGGATCCGAGTGATCATGATCACTGGGGACAACAAGGGT
ACAGCCATTGCCATCTGCCGACGAATTGGCATCTTTTCGGAGAATGAGGAAGTGACAGACCGTGCCTACA
CTGGCCGTGAGTTTGACGATCTGCCCCTGGCCGAGCAGCGGGAGGCCTGCAGACGCGCCTGCTGCTTTGC
TCGTGTGGAGCCCTCACACAAGTCCAAGATTGTGGAGTACCTGCAGTCCTACGATGAGATCACAGCCATG
ACAGGGGATGGTGTCAATGATGCCCCTGCTCTGAAGAAGGCCGAGATTGGCATTGCCATGGGATCTGGTA
CTGCTGTGGCTAAGACGGCCTCTGAAATGGTACTGGCCGATGATAACTTCTCCACCATCGTGGCTGCCGT
GGAGGAAGGCCGCGCCATCTACAACAACATGAAGCAGTTCATCCGCTACCTCATCTCCTCCAATGTGGGC
GAGGTGGTCTGTATCTTCTTGACAGCAGCCTTGGGGCTGCCTGAGGCTCTGATCCCTGTGCAGCTGCTCT
GGGTGAACTTGGTGACTGATGGGCTCCCGGCTACTGCCCTGGGATTCAACCCACCTGACCTGGACATCAT
GGACCGCCCCCCCAGGAGTCCCAAGGAGCCTCTTATCAGTGGCTGGCTCTTTTTCCGCTACATGGCAATT
GGGGGCTATGTGGGTGCAGCCACTGTAGGAGCAGCTGCCTGGTGGTTTTTGTATGCAGAGGACGGGCCTC
ATGTCAGCTACCATCAGCTGACTCATTTCATGCAGTGCACTGAGCACAACCCTGAATTCGATGGCCTGGA
CTGTGAGGTCTTTGAGGCCCCCGAGCCCATGACCATGGCCTTGTCTGTGTTGGTGACCATCGAGATGTGC
AATGCTCTCAACAGCCTGTCTGAGAACCAGTCCCTACTGCGGATGCCACCCTGGGTGAACATCTGGCTGC
TGGGTTCCATCTGCCTGTCCATGTCCCTCCACTTCCTCATCCTCTATGTCGACCCCCTGCCGATGATCTT
CAAGCTCCGGGCCCTGGACTTTACCCAGTGGCTCATGGTCCTCAAGATCTCACTGCCAGTCATCGGGCTG
GATGAGCTTCTCAAGTTCATTGCTCGGAACTATCTGGAGGGATAA

Translation (994 aa):
MEAAHSKSTEECLSYFGVSETTGLTPDQVKRHLEKYGPNELPAEEGKSLWELVVEQFEDLLVRILLLAAC
ISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRI
KARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNMLFS
GTNIAAGKAVGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN
DPVHGGSWFRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICS
DKTGTLTTNQMSVCKMFIIDKVDGDVCSLNEFSITGSTYAPEGEVLKNDKPVRAGQYDGLVELATICALC
NDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRSLSKVERANACNSVIRQLMKKEFTLEFSRD
RKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPLTGPVKEKIMSVIKEWGTGRDTLR
CLALATRDTPPKREEMVLDDSAKFMEYEMDLTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKG
TAIAICRRIGIFSENEEVTDRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAM
TGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG
EVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAI
GGYVGAATVGAAAWWFLYAEDGPHVSYHQLTHFMQCTEHNPEFDGLDCEVFEAPEPMTMALSVLVTIEMC
NALNSLSENQSLLRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLRALDFTQWLMVLKISLPVIGL
DELLKFIARNYLEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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