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Report for CCDS40294.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40294.1 |
Public |
Mus musculus |
8 |
Kat6a |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:244349](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:40294.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:244349](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 8 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 40294.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000044331.6 |
ENSMUSP00000038181.6 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000044331.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000038181.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000044331](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000038181](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000110696.7 |
ENSMUSP00000106324.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000110696.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000106324.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000110696](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000106324](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001081149.2 |
NP_001074618.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001081149.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001074618.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001081149](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001074618](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001074618.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001364449.1 |
NP_001351378.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001364449.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001351378.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001364449](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001351378](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001351378.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 40294.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6012 nt): ATGGTAAAACTCGCTAACCCGCTGTACACGGAGTGGATTTTGGAGGCCATCAAAAAAGTCAAGAAGCAGA AACAGCGACCTTCAGAGGAAAGGATCTGCAATGCCGTGTCCTCATCCCATGGGCTGGACCGCAGGACTGT GCTAGAGCAGCTGGAGCTGAGCGTCAAAGACGGGACGATTTTAAAGGTCTCAAACAAAGGTCTCAATTCC TACAAAGATCCTGATAATCCTGGGCGAATAGCACTTCCTAAACCTCGGAACCATGGAAAATTGGATACTA AGCAAAGTGTGGATTGGAATAAATTACTCAAGCGGGCATTTGAGGGCTTGGCAGAGACTGGTGGCTCAAC TTTGAAAAGTATCGAACGTTTTTTGAAAAGCCAGAAGGATGTATCTGCTGCCTGTGGAGGTAGTGCTGCC CCTGGGTTTCACCAGCAGCTACGATTGGCCATCAAGCGTGCTGTTGGTCATGGCCGACTCCTCAAAGATG GACCCCTCTACCGCCTCAACACTAAGGCAGCCAGTGCTGAAGGGAAAGAGGGCTGTGAGTCGCTCTCGTG TTTACCTCCCGTGTCACTGCTTCCACACGAGAAAGACAAGCCGGTTGCTGAACCAATCCCCATCTGTAGC TTCTGTCTTGGTACAAAAGAGCAGAACCGGGAGAAGCAGCCCGAGGAACTCGTCTCCTGCGCGGACTGCG GCAATAGCGGTCATCCATCGTGTTTAAAGTTCTCCCCAGAGCTAACAGTGAGAGTGAAGGCCTTACGGTG GCAGTGCATTGAGTGTAAAACATGCAGCTCCTGTCGTGACCAAGGCAAAAACGCAGATAACATGCTCTTT TGTGACTCATGTGACCGAGGTTTTCACATGGAGTGTTGTGACCCACCACTTACACGGATGCCAAAAGGTA TGTGGATATGTCAGATATGCCGACCTAGGAAAAAAGGACGGAAACTTCTACAAAAGAAGGCGGCACAGAT AAAACGGCGCTATGCTAATCCAATAGGACGTCCAAAAAACAGGTTAAAGAAACAAAACACGGTATCAAAA GGTCCCTTTAGCAAAGTTCGAACTGGTCCTGGAAGGGGTCGGAAACGTAAAATCACTGTCTCCAGCCAGT CTGCATCATCATCAGAAGAAGGCTATTTAGAGCGGATAGATGGCTTGGACTTCTGCAGAGATAGCAATGC CCCCTTGAAGTTCAACAAGAAAACCAAAGGGCTCATTGATGGCCTTACCAAATTCTTCACCCCTTCTCCT GATGGGCGGAAAGCCCGAGGGGAAGTGGTAGACTACTCTGAGCAATACAGAATCAGGAAAAAGGGCAACA GGAAATCAAGTACTTCAGATTGGCCCACAGACAATCAGGACGGCTGGGAAAGCAAACAAGAAAATGAGGA ACGGCTTTTTGGGAGCCAAGAAATCATGACTGAAAGAGATATGGAATTGTTTCGTGATATCCAAGAACAA GCACTGCAGAAGGTCGGAGTAACTGGGCCCCCTGATCCACAAGTCCGCTGTCCCTCTGTCATTGAGTTTG GGAAGTATGAAATCCACACCTGGTATTCCTCTCCGTACCCTCAGGAGTACTCAAGGCTGCCTAAATTGTA TCTTTGTGAGTTCTGTCTAAAATATATGAAAAGTAGAACTATTCTACAGCAGCACATGAAGAAATGTGGT TGGTTCCATCCTCCTGCCAATGAGATTTACCGAAAGAATAATATTTCTGTCTTTGAGGTTGATGGGAACG TGAGTACCATTTATTGTCAAAATCTGTGTCTCTTGGCAAAGTTGTTTCTTGACCACAAAACACTCTATTA TGACGTGGAGCCATTTCTTTTCTATGTTCTAACACAGAATGATGTCAAGGGCTGCCACCTTGTTGGCTAC TTTTCTAAAGAAAAGCACTGCCAACAGAAATACAATGTCTCCTGTATAATGATTCTTCCCCAATACCAAC GTAAGGGCTACGGCAGGTTTCTCATCGATTTCAGTTATTTGTTATCAAAGCGTGAAGGCCAAGCAGGCTC TCCTGAGAAACCATTATCAGATCTAGGTCGTCTCTCCTACATGGCTTACTGGAAGAGTGTGATCCTGGAG TGCCTTTATCACCAAAATGACAAGCAGATCAGCATCAAGAAGCTGAGCAAGCTGACTGGAGTCTGCCCTC AGGACATCACGTCCACACTGCACCACCTACGAATGCTGGACTTCCGCAGTGACCAATTTGTGATTATCCG CCGGGAGAAACTTATCCAGGATCACATGGCAAAGCTGCAGCTGAACCTTCGGCCTGTAGATGTAGATCCA GAGTGCTTACGCTGGACTCCAGTCATAGTCTCCAATTCTGTGGTCTCCGAGGATGAAGACGAGGAGGCCG ATGAGGGAGAGAAAGAAGAGCCCCAAGGCCAAGAAAGAGAGCTAGAGACCAGGGTAAAGGTGGGGAAGTC TGTGTCTCGGGAGAAAAAAGATCAGGAGTCTTCCTCTTTAATAGAAACTGACAAGAAGCCAGAAGTTAAG GAACTAGCCAGTTCTTCACGTTTGAGCAAACAGGCCCTTCCTCGGGACAGTCTTCCTGCAAATAGCCAGC CACCTCGGAGGGGCCGCTGTGGGAGGAAGAACAGAAAGACACAAGAACGCTTTGGTGATAAAGATTCTAA GATGCTTGTGGATGAGACACTATCCGCTTCTCAAGAGCAATATGGAGACTGCGAGGAAAAGTCAGAAACC TCCCAAGAACGGTTCACTGAGATGGAAGAGCAGTTGGCAGCCCCTCAAGTGCAAGCAGACGGGAAACCAG ACATCCCCAAGGGGAGGTTCAGTGAGAGCGTTGAGTTGTGGCGAGGACAGCTGAAGAAAAGCCCTGAGAC CCTGAAGTGCCGATTGCCAGAAGGAAATGACCGGCTTCCGTGCTGCTACACCGATGGTGACAGGGCTGTC TTTAGGGGCTTCAGCGAGAGCAGTGAGGAGGAGGAAGAGCCAGAGAGTCCCCGGTCAAACTCGCCACCAA TTCTCACGAAGCCCACACTGAAAAGAAAGAAACCGATTCTTCACCGAAGACGAAGAGTCCGCAAGCGGAA ACACCACAATAGCAGTGTAGTCACAGAGACCATCTCTGAGACCACGGAGGTGTTAGATGAGCCTTTTGAA GACTCTGACTCTGAGAGACCAATGCCACGACTGGAGCCTACATTTGAGATGGAGGAAGAGGAGGAGGAGG AGGAGGAGGAGAGTGAGCTCTTCCCCAGAGGGTACTTCCATTGCCTGTCCTCACAGGACATCCTTAGGTG TCAGTCCTCCTCCAAGAGGCCGTCTAAAGAGGAAGAGGAGGAGGAGGAGGAGTCAGACGACGCAGATGAC ACTCCTGTCCTAAAGCCAGTATCTCTCTTGCGAAAATGTGATGTGAACAGTGCTTCACTTGAGCCAGATA CCTCTACACCTATGAAAAAGAAAAAGGGATGGCCCAAAGGCAAGAGCCGAAAACCTATCCACTGGAAGAA AAGGCCTGGACGGAAACCAGGATTTAAATTGAATCAGGAAATCATAGCTGCTTCTGCACAGGAATGCATA GTTGAGCCCGTAGTCCCCATTAAACCAGGCCGTAAACCCAGAACTCAAGAGAATGAAGAAATTGTTGAGG TAAAGGAGGACTTGCTGGAAGAAAGGAAAGAAGAGATGCACACAGAACCAGATGAGGAGGCCGAAGAGGA AGAGGATACAACCAGCAGTGACATTAGAGCCATGTCCCCATTGGACAGCAGCAACAGCCCTGAGGCAGAA CCAAAAGAACCCGAGCCAGAGGAGGAAGACGAGAAGCCTTCGGACGATCAGAGGCAGTCAGAGGAAGAGC CCCAAGAGCTGGAGGAGCAGGAGCAGGAGGAAGAAGATGAAGTGACCACAGAGGCCAACCAGAACGAAGA CCATGACGCTGACGATGAGGACGAAGGCCACCTGGATTCGCTAAAGACAAAAGAGCCAGAGGAGCAGCCA GCTAGAGAAGACGACAAGGAGGAGCCTGGCATCCAGGGATCTTTTTTAGCTGCAAACATGCAGGACAGTA GGGAGAATACAAAGGATAAAGATGAGGCTGAACCGGATTCTGAGGAAGACCAGCCTTCCCATGAGGCTTC TGTGGTATCAGAAACCATGCCAGGCTCAGAGGAGGACCATGAGGAAGACTCCAACACTAAGGAAGAGTTA ATTGAGCTAAAGGAGGAGGAAGAGATCCCACACAGCGAACTGGACCTGGAGACTGTACAGGCAGTGCAAT CTTTGACTCAAGAAGAAAGCAGTGAGCATGAAGGAGCCTACCAGGACTGTGAAGAAACTCTTGCAGCCTG CCAGACACTGCAGAGTTACACCCACACTGATGAGGACCCCCAGATGTCAATGGTTGAAGACTGTCATGCT TCAGAGCATAATAGCCCGATATCCTCCATTCCGTCTCATCCTAGCCAGTCAGTCCGCTCTGTCAACAGCC CCAGCATGCCTGCCCTGGAGAGTGGCTACACACAGATCAGCCCAGAGCAAGGATCCCTGTCCGCACCCTC TATGCAGAACATGGAGACCAGCCCCATGATGGATGTGCCTTCCGTATCAGACCACTCTCAGCAGGTGGTA GACAGCGGCTTCAGTGATCTGGGCAGCATCGAGAGTACCACAGAGAACTATGAGAACCCAAGCAGCTATG ATTCCACCATGGGCAGCAGCATTTGTGGGAATAATTCCTCTCAGAGCAGCTGCTCGTATGGCGGCCTGTC GTCTTCAAGCAGCCTCACCCAGAACAGTTGTGTTGTTACTCAGCAAATGGCCAACATGGGCAACAGCTGC AGCATGCTGCAACAGAACACTGTCCAACCAGCCGCCAACTGCAATATCAAGTCACCGCAGACTTGTGTGG TGGAAAGGCCTCCCAGTAACCAGCAGCCACCCCCGCCACCACCCCCGCCGCCACCACCACAGCAGCCGCA GCCGCCGCCACAGCAACAGGCGGCCCCACAGCCTCCCCCACCACAGCCGCAGCAGCAGCAGCAGCAACAG CAGCAGCCCCCTCCACCACAGCAGCAGCCCCAGCCCCCTCCACCACAGCAGCAGCCCCCTCTGTCTCAGT GCAGTATGAACAACAGCTTCACTGCAGCCCCCATGATAATGGAGATACCCGAGTCTGGAAGCACTGGGAA TATCAGTATCTACGAGAGGATTCCAGGGGATTTTGGTGCAGGCAGCTACTCCCAACCATCAGCCACCTTC AGTCTAGCCAAGCTGCAGCAGCTGACCAACACCATCATGGACCCTCATGCCATGCCTTACAGTCATTCTC CGGCTGTGACTTCCTATGCAACCAGTGTTTCTCTGTCCAACACGGGACTGGCTCAGCTAGCTCCATCTCA TCCCTTAGCCGGGACCCCTCAAGCACAAGCCACCATGACTCCACCCCCAAATCTGGCGTCTACTACTATG AACCTCACGTCACCTCTGCTACAGTGCAACATGTCTGCCACCAACATCGGAATTCCTCACACTCAGAGGT TGCAAGGGCAGATGCCAGTCAAGGGGCACATTTCTATCCGTTCCAAGTCTGCACCTTTACCCTCTGCAAC TGCACACCAACAGCAGCTATATGGCCGCAGCCCACCAGCAGTTGCCATGCAGGCTGGCCCTCGTGCATTG GCTGTTCAGCGTGGCATGAACATGGGGGTTAATTTAATGCCCACTCCAGCCTATAATGTCAATTCCATGA ATATGAACACCTTGAATGCCATGAACAGTTATCGAATGACACAGCCCATGATGAACAGCAGTTACCATAG TAACCCTGCCTACATGAACCAGACAGCACAGTATCCTATGCAGATGCAGATGGGGATGATGGGAAGCCAG GCCTATACCCAGCAGCCTATGCAGCCAAACCCTCACGGGAACATGATGTACACTGGCCCCTCCCATCACA GCTACATGAATGCTGCTGGCGTGCCCAAGCAGTCACTTAACGGACCTTACATGAGGAGATGA
Translation (2003 aa): MVKLANPLYTEWILEAIKKVKKQKQRPSEERICNAVSSSHGLDRRTVLEQLELSVKDGTILKVSNKGLNS YKDPDNPGRIALPKPRNHGKLDTKQSVDWNKLLKRAFEGLAETGGSTLKSIERFLKSQKDVSAACGGSAA PGFHQQLRLAIKRAVGHGRLLKDGPLYRLNTKAASAEGKEGCESLSCLPPVSLLPHEKDKPVAEPIPICS FCLGTKEQNREKQPEELVSCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLF CDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKKAAQIKRRYANPIGRPKNRLKKQNTVSK GPFSKVRTGPGRGRKRKITVSSQSASSSEEGYLERIDGLDFCRDSNAPLKFNKKTKGLIDGLTKFFTPSP DGRKARGEVVDYSEQYRIRKKGNRKSSTSDWPTDNQDGWESKQENEERLFGSQEIMTERDMELFRDIQEQ ALQKVGVTGPPDPQVRCPSVIEFGKYEIHTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCG WFHPPANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCHLVGY FSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLGRLSYMAYWKSVILE CLYHQNDKQISIKKLSKLTGVCPQDITSTLHHLRMLDFRSDQFVIIRREKLIQDHMAKLQLNLRPVDVDP ECLRWTPVIVSNSVVSEDEDEEADEGEKEEPQGQERELETRVKVGKSVSREKKDQESSSLIETDKKPEVK ELASSSRLSKQALPRDSLPANSQPPRRGRCGRKNRKTQERFGDKDSKMLVDETLSASQEQYGDCEEKSET SQERFTEMEEQLAAPQVQADGKPDIPKGRFSESVELWRGQLKKSPETLKCRLPEGNDRLPCCYTDGDRAV FRGFSESSEEEEEPESPRSNSPPILTKPTLKRKKPILHRRRRVRKRKHHNSSVVTETISETTEVLDEPFE DSDSERPMPRLEPTFEMEEEEEEEEEESELFPRGYFHCLSSQDILRCQSSSKRPSKEEEEEEEESDDADD TPVLKPVSLLRKCDVNSASLEPDTSTPMKKKKGWPKGKSRKPIHWKKRPGRKPGFKLNQEIIAASAQECI VEPVVPIKPGRKPRTQENEEIVEVKEDLLEERKEEMHTEPDEEAEEEEDTTSSDIRAMSPLDSSNSPEAE PKEPEPEEEDEKPSDDQRQSEEEPQELEEQEQEEEDEVTTEANQNEDHDADDEDEGHLDSLKTKEPEEQP AREDDKEEPGIQGSFLAANMQDSRENTKDKDEAEPDSEEDQPSHEASVVSETMPGSEEDHEEDSNTKEEL IELKEEEEIPHSELDLETVQAVQSLTQEESSEHEGAYQDCEETLAACQTLQSYTHTDEDPQMSMVEDCHA SEHNSPISSIPSHPSQSVRSVNSPSMPALESGYTQISPEQGSLSAPSMQNMETSPMMDVPSVSDHSQQVV DSGFSDLGSIESTTENYENPSSYDSTMGSSICGNNSSQSSCSYGGLSSSSSLTQNSCVVTQQMANMGNSC SMLQQNTVQPAANCNIKSPQTCVVERPPSNQQPPPPPPPPPPPQQPQPPPQQQAAPQPPPPQPQQQQQQQ QQPPPPQQQPQPPPPQQQPPLSQCSMNNSFTAAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATF SLAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGTPQAQATMTPPPNLASTTM NLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSATAHQQQLYGRSPPAVAMQAGPRAL AVQRGMNMGVNLMPTPAYNVNSMNMNTLNAMNSYRMTQPMMNSSYHSNPAYMNQTAQYPMQMQMGMMGSQ AYTQQPMQPNPHGNMMYTGPSHHSYMNAAGVPKQSLNGPYMRR
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