NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS40725.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40725.1 Public Mus musculus 9 Dipk2a 23 108 98 CCDS HistoryNCBI Gene:68861Re-query CCDS DB by CCDS ID:40725.1Re-query CCDS DB by GeneID:68861See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40725.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113028.1 ENSMUSP00000108651.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113028.1Link to Ensembl Protein Viewer:ENSMUSP00000108651.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113028Re-query CCDS DB by Protein ID:ENSMUSP00000108651
Original member Current member NCBI NM_001033145.2 NP_001028317.2 Accepted alive Link to Nucleotide Sequence:NM_001033145.2Link to Protein Sequence:NP_001028317.2Re-query CCDS DB by Nucleotide ID:NM_001033145Re-query CCDS DB by Protein ID:NP_001028317Link to BLAST:NP_001028317.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028317.2 430 Q3USZ8 430 100% 0 0

Chromosomal Locations for CCDS 40725.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 94520315 94520646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94524392 94524695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94537219 94537875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1293 nt):
ATGTGGCGCCTGGTGCCCCTGAAGCTGGGCCGCCTGTCCCGTGCACTGAAGCTGGCGGCGCTCGGCAGCC
TGTTGGTGCTGATGCTGCTGCACTCGCCGTCGCTGCTCGCCTCCTGGCAGCGCAACGAGCTCGCCGACCG
GCGCTTCCTGCAGCTCAATAAGTGCCCGGCGTGCTTCGGCACGAGCTGGTGCCGCCGTTTCCTCAACGGC
CAGGTGGGCTTCGAGACGTGGGGCCGCCTGCGCCTGCTGGACTTCCTCAACGTGAAGAACGTGTACTTCG
CGCAGTACGGCGAGCCCCGCGAGGGCGGCCGCCGGCGCGTGGTGCTCAAGCGCCTGGGTTCGCAGCGCGA
GCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCGCGCTGCGACCTGCTCCAGGCC
ATGCCCCGCACCGAGTTCGCGCGTCTCAACGGCGACGTGCGGCTGCTCACGCCGGAGGCGGTGGAGGGTT
GGTCGGACCTGGTGCACTGCCCCTCGCAGCGCCTGCTGGACCGCCTGGTGCGCCGCTACGCGGAGACCAA
GGACTCGGGCAGTTTCCTGCTGCGTAACCTCAAGGACTCCGAGCGCATGCAGCTGCTGCTCACCCTGGCC
TTCAACCCCGAGCCGCTGGTGCTACAGAGTTTTCCATCTGATGAAGGTTGGCCATTTGCAAAATATCTTG
GAGCTTGTGGAAGAATGGTGGCTGTAAATTATGTTGGAGAAGAACTGTGGAGTTATTTTAATGCACCATG
GGAGAAGAGAGTTGACCTTGCTTGGCAGTTAATGGAGATAGCAGAGCAGCTTACAAACAATGACTTTGAA
TTTGCACTCTACCTCCTGGACGTCAGCTTTGACAACTTTGCAGTTGGTCCAAGAGATGGGAAAGTAATCA
TTGTGGATGCCGAAAATGTTTTAGTTGCCGACAAAAGATTAATTAGACAAAATAAGCCTGAGAATTGGGA
CGTATGGTATGAAAGCAAGTTTGACGATTGTGACAAGGAAGCTTGCTTGTCATTTTCAAAAGAAATCCTC
TGTGCTCGTGTCACTGTGGACCACAATTACTATGCCGTTTGTCAGAACCTCTTATCCAGACATGCCACCT
GGCGCGGCACTTCTGGAGGACTCCTCCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGACTGGAGGC
CTTGCTGGATGAGTGCACCAACCCCAAGAAACGCTATGGCCGGTTCCAGGCCGCAAAAGAACTGCGTGGC
TATCTGGCACAGTTAAGTCACAATGTGAGGTAG

Translation (430 aa):
MWRLVPLKLGRLSRALKLAALGSLLVLMLLHSPSLLASWQRNELADRRFLQLNKCPACFGTSWCRRFLNG
QVGFETWGRLRLLDFLNVKNVYFAQYGEPREGGRRRVVLKRLGSQRELAQLDQSICKRATGRPRCDLLQA
MPRTEFARLNGDVRLLTPEAVEGWSDLVHCPSQRLLDRLVRRYAETKDSGSFLLRNLKDSERMQLLLTLA
FNPEPLVLQSFPSDEGWPFAKYLGACGRMVAVNYVGEELWSYFNAPWEKRVDLAWQLMEIAEQLTNNDFE
FALYLLDVSFDNFAVGPRDGKVIIVDAENVLVADKRLIRQNKPENWDVWYESKFDDCDKEACLSFSKEIL
CARVTVDHNYYAVCQNLLSRHATWRGTSGGLLHDPPSEIAKDGRLEALLDECTNPKKRYGRFQAAKELRG
YLAQLSHNVR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH