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Report for CCDS40744.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40744.1 Public Mus musculus 9 Anapc13 23 108 98 CCDS HistoryNCBI Gene:69010Re-query CCDS DB by CCDS ID:40744.1Re-query CCDS DB by GeneID:69010See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40744.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038673.13 ENSMUSP00000039761.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038673.13Link to Ensembl Protein Viewer:ENSMUSP00000039761.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000038673Re-query CCDS DB by Protein ID:ENSMUSP00000039761
Original member Current member EBI ENSMUST00000186693.1 ENSMUSP00000139762.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000186693.1Link to Ensembl Protein Viewer:ENSMUSP00000139762.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000186693Re-query CCDS DB by Protein ID:ENSMUSP00000139762
Original member Current member EBI ENSMUST00000188398.6 ENSMUSP00000140325.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000188398.6Link to Ensembl Protein Viewer:ENSMUSP00000140325.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000188398Re-query CCDS DB by Protein ID:ENSMUSP00000140325
Original member Current member EBI ENSMUST00000190279.6 ENSMUSP00000140967.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000190279.6Link to Ensembl Protein Viewer:ENSMUSP00000140967.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000190279Re-query CCDS DB by Protein ID:ENSMUSP00000140967
Original member Current member NCBI NM_181394.3 NP_852059.1 Accepted alive Link to Nucleotide Sequence:NM_181394.3Link to Protein Sequence:NP_852059.1Re-query CCDS DB by Nucleotide ID:NM_181394Re-query CCDS DB by Protein ID:NP_852059Link to BLAST:NP_852059.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_852059.1 74 Q8R034 74 100% 0 0

Chromosomal Locations for CCDS 40744.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 102629790 102629888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 102634014 102634139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (225 nt):
ATGGACAGTGAGGTACAGCGAGATGGAAGGATCTTGGACCTGATTGATGATGCTTGGCGGGAAGATAAGC
TGCCATATGAGGATGTCGCCATTCCACTGAGTGAGCTTCCTGAGCCCGAGCAAGACAACGGAGGCACCAC
AGAGTCTGTGAAAGAACAGGAGATGAAGTGGACAGACCTGGCCTTACAGGGCCTCCACGAGAACGTCCCA
CCCGCTGGAAACTGA

Translation (74 aa):
MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLSELPEPEQDNGGTTESVKEQEMKWTDLALQGLHENVP
PAGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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