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Report for CCDS41826.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41826.1 Public Homo sapiens 12 WASHC4 24 110 108 CCDS HistoryNCBI Gene:23325Re-query CCDS DB by CCDS ID:41826.1Re-query CCDS DB by GeneID:23325See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41826.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332180.10 ENSP00000328062.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332180.10Link to Ensembl Protein Viewer:ENSP00000328062.6Re-query CCDS DB by Nucleotide ID:ENST00000332180Re-query CCDS DB by Protein ID:ENSP00000328062
Original member Current member NCBI NM_015275.3 NP_056090.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015275.3Link to Protein Sequence:NP_056090.1Re-query CCDS DB by Nucleotide ID:NM_015275Re-query CCDS DB by Protein ID:NP_056090Link to BLAST:NP_056090.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056090.1 1173 Q2M389-1 1173 100% 0 0

Chromosomal Locations for CCDS 41826.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 105107801 105107861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105111125 105111264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105114216 105114269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105114362 105114427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105115184 105115229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105115661 105115728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105118446 105118528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105120555 105120597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105121101 105121204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105122118 105122238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105126004 105126127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105126235 105126362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105127129 105127289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105133770 105133896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105137886 105138011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105140294 105140401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105140899 105141045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105141167 105141246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105142453 105142558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105143127 105143243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105144287 105144455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105144718 105144872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105146452 105146526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105147042 105147146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105149615 105149749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105152343 105152451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105156726 105156792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105157236 105157322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105160001 105160148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105162749 105162845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105164111 105164307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105164641 105164740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105166864 105166931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3522 nt):
ATGGCGGTGGAGACTCTGTCCCCGGACTGGGAGTTTGACCGCGTTGACGACGGCTCGCAGAAAATTCATG
CCGAAGTCCAACTTAAGAATTATGGGAAATTTCTTGAGGAGTATACCTCTCAACTGAGAAGAATTGAGGA
CGCTCTGGATGACTCAATTGGAGATGTTTGGGATTTCAATCTTGATCCTATAGCATTAAAGCTTTTGCCT
TATGAACAGTCCTCTCTTTTGGAACTCATAAAGACTGAAAACAAGGTCTTAAACAAAGTCATCACTGTTT
ATGCTGCACTTTGTTGTGAAATCAAGAAATTAAAATATGAGGCTGAAACTAAATTTTACAATGGTCTCTT
GTTTTATGGAGAAGGAGCTACAGATGCCAGCATGGTGGAAGGTGATTGCCAAATTCAAATGGGGAGATTT
ATTTCATTCTTACAGGAACTGTCTTGCTTTGTTACGAGGTGCTATGAAGTGGTGATGAACGTAGTCCACC
AGTTGGCTGCCCTCTATATCAGTAACAAGATTGCACCCAAAATTATAGAGACAACTGGAGTTCATTTTCA
GACTATGTATGAGCACTTGGGAGAACTGCTAACAGTTTTGCTCACCCTGGATGAAATTATTGATAATCAT
ATCACACTGAAAGACCACTGGACTATGTACAAAAGGTTACTGAAATCTGTCCATCACAATCCTTCAAAAT
TTGGAATTCAGGAAGAAAAATTAAAGCCATTTGAAAAGTTCTTGCTGAAGCTAGAAGGGCAATTACTGGA
TGGAATGATATTCCAGGCCTGTATAGAACAACAATTTGATTCTCTCAATGGAGGAGTATCTGTGTCAAAA
AATAGTACTTTTGCTGAGGAATTTGCACATAGTATTCGGTCAATTTTTGCAAATGTAGAAGCCAAACTTG
GAGAACCTTCTGAAATTGACCAGAGAGACAAGTATGTTGGAATTTGTGGACTCTTTGTATTGCACTTTCA
GATTTTTCGAACTATTGATAAAAAGTTTTATAAGTCTTTATTGGACATTTGTAAGAAGGTACCAGCCATC
ACTCTAACTGCTAATATTATTTGGTTTCCTGATAATTTTCTGATCCAGAAAATACCAGCAGCTGCCAAAC
TGCTAGACAGAAAAAGTCTTCAAGCCATTAAAATACACAGGGATACTTTTCTACAACAGAAAGCTCAATC
ACTTACCAAAGATGTACAGTCTTACTACGTCTTTGTGAGCTCATGGATGATGAAAATGGAATCTATTTTG
TCTAAAGAGCAGAGAATGGATAAATTTGCTGAAGATCTCACCAATAGATGTAATGTTTTTATACAGGGCT
TCTTGTATGCATATAGTATTAGTACCATTATTAAAACCACAATGAATCTCTACATGTCCATGCAAAAGCC
AATGACCAAAACCTCAGTTAAGGCATTGTGCAGGCTTGTTGAACTTCTCAAGGCAATAGAGCATATGTTC
TACAGGAGAAGCATGGTTGTGGCTGATTCAGTTTCACATATAACACAGCACCTTCAACATCAGGCTCTTC
ATTCTATTTCTGTGGCCAAGAAAAGAGTGATTTCTGACAAAAAATACAGCGAACAGCGTCTTGATGTGCT
CTCTGCTCTAGTTTTGGCTGAAAACACTCTAAATGGACCAAGCACAAAGCAACGGCGACTTATTGTTTCT
TTGGCACTAAGTGTTGGCACACAAATGAAAACATTTAAAGATGAAGAACTCTTTCCACTTCAAGTAGTCA
TGAAAAAACTGGATCTTATTAGTGAACTTAGAGAACGAGTCCAAACACAATGTGACTGTTGTTTTTTATA
CTGGCATCGAGCTGTCTTCCCAATTTATTTAGATGATGTATATGAAAATGCTGTTGATGCAGCCAGATTA
CATTACATGTTCAGTGCTTTGCGCGACTGTGTACCTGCTATGATGCATGCAAGGCATTTAGAGTCCTATG
AGATACTTCTGGATTGCTATGACAAGGAAATTATGGAAATTTTAAATGAGCATTTGCTGGACAAATTATG
CAAAGAAATAGAGAAAGATCTGCGACTTTCTGTGCATACTCATTTAAAGCTGGATGACCGAAACCCTTTC
AAAGTTGGCATGAAAGACCTGGCTCTTTTTTTCTCTCTGAATCCAATTCGGTTTTTCAATCGTTTCATTG
ACATTCGGGCTTACGTAACTCACTACCTAGACAAGACTTTCTACAATCTAACAACTGTAGCCCTTCATGA
CTGGGCCACTTATAGTGAGATGAGAAACTTAGCTACTCAGCGTTATGGACTGGTTATGACAGAGGCACAT
CTTCCCAGTCAGACTTTGGAACAGGGCCTTGATGTTTTAGAAATTATGAGAAACATTCATATATTTGTGT
CCCGATACCTCTATAATCTCAACAATCAGATTTTTATTGAACGAACAAGCAATAACAAGCATTTGAATAC
TATTAATATTCGGCATATTGCTAATTCAATTCGAACACATGGCACGGGAATTATGAATACAACTGTTAAT
TTCACCTACCAGTTTTTGAAAAAGAAGTTCTATATATTTAGCCAATTTATGTATGATGAACACATCAAAT
CCAGATTGATTAAAGATATTCGATTTTTCAGGGAAATTAAGGACCAAAATGATCATAAGTATCCTTTTGA
TAGAGCAGAAAAATTCAATCGAGGCATCAGAAAACTTGGAGTAACACCTGAGGGACAGAGCTACCTTGAT
CAATTCAGGCAACTCATCAGCCAGATTGGTAATGCTATGGGCTATGTACGAATGATAAGATCTGGTGGTC
TTCATTGTAGCAGCAATGCCATTAGATTTGTTCCTGATCTTGAAGATATTGTAAATTTTGAAGAACTAGT
AAAAGAAGAAGGTCTTGCAGAAGAAACATTAAAAGCAGCAAGGCATTTGGATTCAGTCCTCAGTGATCAC
ACACGAAATTCTGCCGAAGGCACAGAATATTTCAAAATGCTTGTAGACGTTTTTGCTCCAGAATTTCGAA
GGCCAAAGAATATACATCTCCGAAATTTCTATATAATTGTTCCCCCTCTGACCCTCAACTTTGTAGAGCA
TTCCATTAGTTGCAAGGAAAAATTAAATAAAAAAAATAAAATTGGAGCTGCCTTTACTGATGATGGCTTT
GCCATGGGTGTGGCTTACATTCTAAAGCTTTTGGATCAGTATCGGGAGTTTGATTCACTTCACTGGTTCC
AGTCTGTTAGAGAGAAATACCTGAAGGAGATAAGAGCAGTTGCTAAGCAACAGAATGTACAGTCAGCCAG
TCAAGATGAAAAACTCTTACAAACCATGAATCTCACTCAGAAGCGACTGGATGTCTATCTACAGGAATTT
GAATTGCTGTATTTCTCACTGAGCAGTGCAAGAATTTTCTTCAGAGCAGACAAGACTGCGGCTGAAGAAA
ACCAAGAAAAGAAAGAGAAGGAAGAAGAAACTAAAACAAGCAATGGAGACCTGTCTGACAGCACTGTGTC
TGCTGATCCTGTTGTGAAATGA

Translation (1173 aa):
MAVETLSPDWEFDRVDDGSQKIHAEVQLKNYGKFLEEYTSQLRRIEDALDDSIGDVWDFNLDPIALKLLP
YEQSSLLELIKTENKVLNKVITVYAALCCEIKKLKYEAETKFYNGLLFYGEGATDASMVEGDCQIQMGRF
ISFLQELSCFVTRCYEVVMNVVHQLAALYISNKIAPKIIETTGVHFQTMYEHLGELLTVLLTLDEIIDNH
ITLKDHWTMYKRLLKSVHHNPSKFGIQEEKLKPFEKFLLKLEGQLLDGMIFQACIEQQFDSLNGGVSVSK
NSTFAEEFAHSIRSIFANVEAKLGEPSEIDQRDKYVGICGLFVLHFQIFRTIDKKFYKSLLDICKKVPAI
TLTANIIWFPDNFLIQKIPAAAKLLDRKSLQAIKIHRDTFLQQKAQSLTKDVQSYYVFVSSWMMKMESIL
SKEQRMDKFAEDLTNRCNVFIQGFLYAYSISTIIKTTMNLYMSMQKPMTKTSVKALCRLVELLKAIEHMF
YRRSMVVADSVSHITQHLQHQALHSISVAKKRVISDKKYSEQRLDVLSALVLAENTLNGPSTKQRRLIVS
LALSVGTQMKTFKDEELFPLQVVMKKLDLISELRERVQTQCDCCFLYWHRAVFPIYLDDVYENAVDAARL
HYMFSALRDCVPAMMHARHLESYEILLDCYDKEIMEILNEHLLDKLCKEIEKDLRLSVHTHLKLDDRNPF
KVGMKDLALFFSLNPIRFFNRFIDIRAYVTHYLDKTFYNLTTVALHDWATYSEMRNLATQRYGLVMTEAH
LPSQTLEQGLDVLEIMRNIHIFVSRYLYNLNNQIFIERTSNNKHLNTINIRHIANSIRTHGTGIMNTTVN
FTYQFLKKKFYIFSQFMYDEHIKSRLIKDIRFFREIKDQNDHKYPFDRAEKFNRGIRKLGVTPEGQSYLD
QFRQLISQIGNAMGYVRMIRSGGLHCSSNAIRFVPDLEDIVNFEELVKEEGLAEETLKAARHLDSVLSDH
TRNSAEGTEYFKMLVDVFAPEFRRPKNIHLRNFYIIVPPLTLNFVEHSISCKEKLNKKNKIGAAFTDDGF
AMGVAYILKLLDQYREFDSLHWFQSVREKYLKEIRAVAKQQNVQSASQDEKLLQTMNLTQKRLDVYLQEF
ELLYFSLSSARIFFRADKTAAEENQEKKEKEEETKTSNGDLSDSTVSADPVVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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