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Report for CCDS42475.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42475.1 Public Homo sapiens 19 ZNRF4 24 110 108 CCDS HistoryNCBI Gene:148066Re-query CCDS DB by CCDS ID:42475.1Re-query CCDS DB by GeneID:148066See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42475.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000222033.6 ENSP00000222033.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000222033.6Link to Ensembl Protein Viewer:ENSP00000222033.4Re-query CCDS DB by Nucleotide ID:ENST00000222033Re-query CCDS DB by Protein ID:ENSP00000222033
Original member Current member NCBI NM_181710.4 NP_859061.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181710.4Link to Protein Sequence:NP_859061.3Re-query CCDS DB by Nucleotide ID:NM_181710Re-query CCDS DB by Protein ID:NP_859061Link to BLAST:NP_859061.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_859061.3 429 Q8WWF5 429 100% 0 0

Chromosomal Locations for CCDS 42475.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5455492 5456781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1290 nt):
ATGCCGCTCTGCCGTCCGGAGCACTTAATGCCTAGAGCCAGCAGGGTCCCAGTGGCCGCGTCACTGCCTC
TGAGCCACGCGGTCATTCCAACTCAACTGCCCTCGCGTCCTGGCCACAGGCCCCCTGGGAGACCCCGGAG
ATGCCCAAAGGCCTCATGCCTGCCGCCTCCAGTGGGACCTAGCAGCACACAGACAGCGAAGCGGGTGACC
ATGGGGTGGCCACGGCCGGGCCGAGCCCTCGTGGCAGTCAAAGCCTTGCTGGTCTTGTCGCTGCTCCAGG
TGCCCGCGCAGGCAGTGGTACGGGCCGTGCTGGAAGACAACTCGAGCTCGGTGGACTTTGCGGATCTGCC
GGCGCTGTTCGGCGTCCCCCTGGCCCCCGAGGGCATACGGGGCTACCTGATGGAGGTCAAGCCAGCCAAC
GCGTGCCATCCCATCGAGGCCCCGCGACTGGGCAACCGCTCTCTGGGCGCCATCGTGCTGATCCGCCGCT
ACGACTGCACCTTCGACCTCAAGGTGCTGAACGCCCAGCGCGCCGGCTTCGAGGCGGCCATCGTGCACAA
CGTCCACTCCGACGACCTCGTGAGCATGACCCACGTCTACGAGGACTTGAGGGGCCAGATCGCCATCCCC
TCAGTGTTCGTGAGCGAGGCCGCCTCGCAGGACCTGCGGGTCATCCTGGGCTGCAACAAGTCGGCCCACG
CGCTGCTCCTGCCCGACGACCCACCGTGCCACGACCTGGGCTGTCACCCCGTGCTGACCGTGTCCTGGGT
GCTGGGCTGTACCCTGGCCCTGGTCGTATCAGCCTTCTTTGTCCTGAACCACCTGTGGCTCTGGGCCCAG
GCCTGCTGCAGCCACAGACGGCCGGTGAAGACGTCTACCTGCCAGAAGGCCCAGGTCCGCACCTTCACGT
GGCACAACGACCTGTGTGCCATCTGCCTGGATGAGTATGAGGAGGGCGACCAACTCAAGATCCTGCCCTG
CTCCCACACCTACCACTGCAAATGCATTGACCCCTGGTTCTCCCAAGCCCCCCGGCGCTCCTGCCCCGTG
TGCAAACAGTCGGTGGCCGCCACAGAAGACAGCTTTGACTCCACCACCTACAGCTTCAGGGACGAGGACC
CCTCCCTACCGGGCCACCGGCCCCCCATCTGGGCCATTCAAGTCCAGCTACGCTCCCGGAGGCTGGAGCT
GCTGGGCCGCGCCAGTCCCCACTGCCACTGCAGCACCACGTCCCTGGAGGCAGAGTATACCACTGTCTCC
TCAGCCCCTCCTGAGGCCCCTGGTCAGTAA

Translation (429 aa):
MPLCRPEHLMPRASRVPVAASLPLSHAVIPTQLPSRPGHRPPGRPRRCPKASCLPPPVGPSSTQTAKRVT
MGWPRPGRALVAVKALLVLSLLQVPAQAVVRAVLEDNSSSVDFADLPALFGVPLAPEGIRGYLMEVKPAN
ACHPIEAPRLGNRSLGAIVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDDLVSMTHVYEDLRGQIAIP
SVFVSEAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWVLGCTLALVVSAFFVLNHLWLWAQ
ACCSHRRPVKTSTCQKAQVRTFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPV
CKQSVAATEDSFDSTTYSFRDEDPSLPGHRPPIWAIQVQLRSRRLELLGRASPHCHCSTTSLEAEYTTVS
SAPPEAPGQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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