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Report for CCDS4266.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4266.1 Public Homo sapiens 5 ARAP3 24 110 108 CCDS HistoryNCBI Gene:64411Re-query CCDS DB by CCDS ID:4266.1Re-query CCDS DB by GeneID:64411See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4266.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000239440.9 ENSP00000239440.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000239440.9Link to Ensembl Protein Viewer:ENSP00000239440.4Re-query CCDS DB by Nucleotide ID:ENST00000239440Re-query CCDS DB by Protein ID:ENSP00000239440
Original member Current member NCBI NM_022481.6 NP_071926.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022481.6Link to Protein Sequence:NP_071926.4Re-query CCDS DB by Nucleotide ID:NM_022481Re-query CCDS DB by Protein ID:NP_071926Link to BLAST:NP_071926.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071926.4 1544 Q8WWN8-1 1544 100% 0 0

Chromosomal Locations for CCDS 4266.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 141653950 141654435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141655362 141655400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141655621 141655758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141655869 141655932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141656064 141656099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141656194 141656276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141656504 141656637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141656718 141656846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141658365 141658479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141658579 141658653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141659408 141659476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141659779 141659926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141661684 141661789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141662043 141662255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141664922 141665085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141665311 141665374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141666424 141666643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141669709 141669811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141669922 141670063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141670512 141670628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141671265 141671400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141671570 141671752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141671895 141671980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141672102 141672301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141672552 141672658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141672741 141672925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141673013 141673133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141673401 141673470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141673605 141673808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141679545 141679656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141679761 141679822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 141679963 141680486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4635 nt):
ATGGCTGCCCCTCAGGACCTGGACATCGCTGTGTGGCTGGCCACGGTGCACCTGGAGCAGTATGCAGACA
CGTTCCGACGGCATGGCCTGGCTACAGCAGGTGCAGCCCGGGGCCTGGGCCACGAGGAGTTGAAGCAGTT
GGGCATCAGCGCCACAGGGCACCGGAAACGCATTCTACGCCTGCTACAGACAGGCACCGAAGAGGGCTCC
CTGGATCCCAAATCAGATAGTGCCATGGAACCATCCCCCAGCCCAGCCCCGCAAGCCCAGCCCCCTAAGC
CCGTGCCGAAGCCCAGGACCGTGTTTGGTGGACTCAGTGGCCCTGCCACCACTCAGAGACCTGGGCTGAG
CCCAGCCCTCGGGGGACCAGGAGTGTCCAGGAGCCCAGAGCCCAGCCCAAGGCCTCCTCCTCTCCCCACT
TCCTCCTCTGAGCAGTCTTCAGCCCTAAATACTGTGGAGATGATGCCTAATTCCATCTACTTCGGCCTGG
ACTCAAGAGGCAGGGCACAGGCAGCTCAGGACAAGGCCCCAGACAGCTCCCAAATCTCTGCCCCCACCCC
TGCCCTCAGGCCCACAACAGGCACAGTGCACATCATGGATCCTGGTTGCCTGTACTATGGTGTCCAACCT
GTGGGGACTCCAGGAGCCCCCGACAGAAGAGAGAGCAGAGGTGTTTGTCAGGGCAGGGCTGAACACAGGC
TCAGCAGACAGGATCTGGAGGCACGGGAGGATGCTGGCTATGCCAGCCTTGAGCTACCTGGAGACTCCAC
CCTCTTATCGCCCACCCTGGAAACAGAGGAGACCAGTGATGACCTCATTTCACCCTATGCCAGCTTCTCC
TTCACGGCAGACCGCCTCACGCCCCTGCTCAGTGGCTGGCTAGACAAGCTCTCCCCTCAGGGAAACTATG
TCTTCCAGAGACGCTTTGTGCAGTTCAATGGGAGGAGTCTGATGTACTTTGGCAGTGACAAGGACCCCTT
CCCTAAGGGTGTGATACCTTTGACTGCCATTGAGATGACCCGCAGCAGCAAGGACAACAAGTTCCAGGTC
ATCACCGGCCAGAGGGTGTTCGTGTTCCGCACAGAGAGCGAGGCTCAGCGGGACATGTGGTGCTCCACGC
TGCAGTCCTGTCTGAAGGAGCAGCGCCTCCTGGGCCACCCCCGGCCCCCCCAACCACCCCGACCCCTCCG
CACGGGCATGCTGGAGCTGCGTGGACACAAGGCCAAGGTGTTTGCTGCCTTGAGCCCTGGAGAGCTGGCA
CTGTACAAGAGTGAGCAGGCCTTCTCTCTGGGCATCGGGATCTGCTTCATCGAACTGCAGGGCTGCAGCG
TCCGGGAGACCAAGAGTCGAAGCTTTGACCTGCTCACACCCCATCGCTGCTTCAGCTTCACAGCCGAGTC
TGGGGGTGCTCGGCAGAGCTGGGCGGCCGCTCTGCAGGAAGCAGTAACCGAGACCCTGTCTGACTACGAG
GTGGCTGAGAAGATCTGGTCTAATCGGGCCAACCGGCAGTGTGCGGACTGTGGGTCCTCCCGCCCAGATT
GGGCTGCTGTCAATTTGGGGGTGGTCATCTGCAAGCAGTGTGCAGGTCAGCACCGGGCCCTGGGTTCTGG
GATCTCCAAGGTGCAGAGCCTGAAGCTGGACACGAGTGTCTGGAGTAATGAGATAGTACAGTTATTCATT
GTCCTGGGAAATGATCGTGCCAACCGCTTCTGGGCAGGGACCCTACCCCCAGGTGAGGGACTACATCCAG
ATGCGACCCCTGGCCCCCGGGGAGAGTTCATCTCCCGAAAGTACCGTCTGGGTCTCTTCCGGAAGCCCCA
CCCTCAGTACCCAGATCATAGCCAGCTTCTCCAGGCACTGTGTGCAGCTGTGGCAAGACCCAACCTGCTG
AAGAACATGACCCAGCTCCTCTGTGTTGAGGCCTTTGAAGGCGAGGAGCCCTGGTTCCCCCCAGCCCCTG
ATGGCAGCTGCCCTGGCCTCTTGCCCTCAGACCCCTCCCCTGGTGTGTACAATGAGGTGGTGGTGCGTGC
TACTTACAGCGGCTTCCTGTACTGCAGTCCCGTCAGCAACAAAGCTGGACCCTCACCCCCTCGCAGGGGC
CGGGATGCTCCCCCGCGCCTTTGGTGTGTGCTGGGAGCAGCTCTGGAAATGTTTGCATCGGAAAACAGCC
CTGAACCCCTCAGCCTCATACAGCCCCAGGATATTGTATGTCTGGGTGTGAGCCCCCCACCCACTGACCC
AGGTGACAGGTTCCCCTTTTCCTTTGAGCTCATCCTCGCTGGGGGGAGGATCCAGCATTTTGGCACAGAT
GGAGCTGACAGTCTGGAGGCCTGGACTAGTGCTGTGGGCAAGTGGTTCTCCCCGCTGAGCTGCCACCAGC
TGCTGGGCCCCGGGCTGCTGCGGCTGGGCCGCCTATGGCTGCGGTCCCCCTCCCATACAGCCCCGGCCCC
TGGTCTCTGGCTGTCAGGGTTTGGCCTCCTTCGTGGTGACCACCTCTTCCTGTGCTCAGCGCCGGGCCCA
GGCCCCCCAGCCCCTGAGGACATGGTGCATCTGCGGCGGCTACAGGAGATCAGTGTGGTTTCTGCAGCTG
ACACCCCAGATAAGAAAGAGCATTTGGTCCTGGTGGAGACAGGAAGGACCCTGTATCTGCAAGGAGAGGG
CCGGCTGGACTTCACGGCATGGAACGCAGCCATTGGGGGCGCGGCTGGTGGGGGCGGCACAGGGCTGCAG
GAGCAGCAGATGAGCCGGGGTGACATCCCCATCATCGTGGATGCCTGCATCAGTTTTGTTACCCAGCATG
GGCTCCGGCTGGAAGGTGTATACCGGAAAGGGGGCGCTCGTGCCCGCAGCCTGAGACTCCTGGCTGAGTT
CCGTCGGGATGCCCGGTCGGTGAAGCTCCGACCAGGGGAGCACTTTGTGGAGGATGTCACTGACACACTC
AAACGCTTCTTTCGTGAGCTCGATGACCCTGTGACCTCTGCACGGTTGCTGCCTCGCTGGAGGGAGGCTG
CTGAGCTGCCCCAGAAGAATCAGCGCCTGGAGAAATATAAAGATGTGATTGGCTGCCTGCCGCGGGTCAA
CCGCCGCACACTGGCCACCCTCATTGGGCATCTCTATCGGGTGCAGAAATGTGCGGCTCTAAACCAGATG
TGCACGCGGAACTTGGCTCTGCTGTTTGCACCCAGCGTGTTCCAGACGGATGGGCGAGGGGAGCACGAGG
TGCGAGTGCTGCAAGAGCTCATTGATGGCTACATCTCTGTCTTTGATATCGATTCTGACCAGGTAGCTCA
GATTGACTTGGAGGTCAGTCTTATCACCACCTGGAAGGACGTGCAGCTGTCTCAGGCTGGAGACCTCATC
ATGGAAGTTTATATAGAGCAGCAGCTCCCAGACAACTGTGTCACCCTGAAGGTGTCCCCAACCCTGACTG
CTGAGGAGCTGACTAACCAGGTACTGGAGATGCGGGGGACAGCAGCTGGGATGGACTTGTGGGTGACTTT
TGAGATTCGCGAGCATGGGGAGCTGGAGCGGCCACTGCATCCCAAGGAAAAGGTCTTAGAGCAGGCTTTA
CAATGGTGCCAGCTCCCAGAGCCCTGCTCAGCTTCCCTGCTCTTGAAAAAAGTCCCCCTGGCCCAAGCTG
GCTGCCTCTTCACAGGTATCCGACGTGAGAGCCCACGGGTGGGGCTGTTGCGGTGTCGTGAGGAGCCACC
TCGCTTGCTGGGAAGCCGCTTCCAGGAGAGGTTCTTTCTGCTGCGTGGCCGCTGCCTGCTGCTGCTCAAG
GAGAAGAAAAGCTCTAAACCAGAACGGGAGTGGCCTTTGGAAGGTGCCAAGGTCTACCTGGGAATCCGCA
AGAAGTTAAAGCCCCCAACACCGTGGGGCTTCACATTGATACTAGAGAAGATGCACCTCTACTTGTCCTG
CACTGACGAGGATGAAATGTGGGATTGGACCACCAGCATCCTTAAAGCCCAGCACGATGACCAGCAGCCA
GTGGTCTTACGACGCCATTCCTCCTCTGACCTTGCCCGTCAGAAGTTTGGCACTATGCCTTTGCTGCCTA
TCCGTGGGGATGACAGTGGAGCCACCCTCCTCTCTGCCAATCAGACCCTGCGGCGACTACACAACCGGAG
GACCCTGTCCATGTTCTTTCCAATGAAGTCATCCCAGGGGTCTGTGGAGGAGCAAGAGGAGCTGGAGGAG
CCTGTGTACGAGGAGCCAGTGTATGAGGAAGTAGGGGCCTTCCCTGAGTTGATCCAGGACACTTCTACCT
CCTTCTCCACCACACGGGAGTGGACAGTGAAGCCAGAGAACCCCCTCACCAGCCAGAAGTCATTGGATCA
ACCCTTTCTCTCCAAGTCAAGCACCCTTGGCCAGGAGGAGAGGCCACCTGAGCCCCCTCCAGGCCCCCCT
TCAAAGAGCAGTCCCCAGGCACGGGGGTCCCTAGAGGAACAGCTGCTCCAGGAGCTCAGCAGCCTCATCC
TGAGGAAAGGAGAGACCACTGCAGGCCTGGGAAGTCCTTCCCAGCCATCCAGCCCCCAATCCCCCAGCCC
CACTGGCCTTCCAACACAGACACCTGGCTTCCCCACCCAACCCCCATGCACTTCCAGTCCACCCTCCAGC
CAGCCCCTCACATGA

Translation (1544 aa):
MAAPQDLDIAVWLATVHLEQYADTFRRHGLATAGAARGLGHEELKQLGISATGHRKRILRLLQTGTEEGS
LDPKSDSAMEPSPSPAPQAQPPKPVPKPRTVFGGLSGPATTQRPGLSPALGGPGVSRSPEPSPRPPPLPT
SSSEQSSALNTVEMMPNSIYFGLDSRGRAQAAQDKAPDSSQISAPTPALRPTTGTVHIMDPGCLYYGVQP
VGTPGAPDRRESRGVCQGRAEHRLSRQDLEAREDAGYASLELPGDSTLLSPTLETEETSDDLISPYASFS
FTADRLTPLLSGWLDKLSPQGNYVFQRRFVQFNGRSLMYFGSDKDPFPKGVIPLTAIEMTRSSKDNKFQV
ITGQRVFVFRTESEAQRDMWCSTLQSCLKEQRLLGHPRPPQPPRPLRTGMLELRGHKAKVFAALSPGELA
LYKSEQAFSLGIGICFIELQGCSVRETKSRSFDLLTPHRCFSFTAESGGARQSWAAALQEAVTETLSDYE
VAEKIWSNRANRQCADCGSSRPDWAAVNLGVVICKQCAGQHRALGSGISKVQSLKLDTSVWSNEIVQLFI
VLGNDRANRFWAGTLPPGEGLHPDATPGPRGEFISRKYRLGLFRKPHPQYPDHSQLLQALCAAVARPNLL
KNMTQLLCVEAFEGEEPWFPPAPDGSCPGLLPSDPSPGVYNEVVVRATYSGFLYCSPVSNKAGPSPPRRG
RDAPPRLWCVLGAALEMFASENSPEPLSLIQPQDIVCLGVSPPPTDPGDRFPFSFELILAGGRIQHFGTD
GADSLEAWTSAVGKWFSPLSCHQLLGPGLLRLGRLWLRSPSHTAPAPGLWLSGFGLLRGDHLFLCSAPGP
GPPAPEDMVHLRRLQEISVVSAADTPDKKEHLVLVETGRTLYLQGEGRLDFTAWNAAIGGAAGGGGTGLQ
EQQMSRGDIPIIVDACISFVTQHGLRLEGVYRKGGARARSLRLLAEFRRDARSVKLRPGEHFVEDVTDTL
KRFFRELDDPVTSARLLPRWREAAELPQKNQRLEKYKDVIGCLPRVNRRTLATLIGHLYRVQKCAALNQM
CTRNLALLFAPSVFQTDGRGEHEVRVLQELIDGYISVFDIDSDQVAQIDLEVSLITTWKDVQLSQAGDLI
MEVYIEQQLPDNCVTLKVSPTLTAEELTNQVLEMRGTAAGMDLWVTFEIREHGELERPLHPKEKVLEQAL
QWCQLPEPCSASLLLKKVPLAQAGCLFTGIRRESPRVGLLRCREEPPRLLGSRFQERFFLLRGRCLLLLK
EKKSSKPEREWPLEGAKVYLGIRKKLKPPTPWGFTLILEKMHLYLSCTDEDEMWDWTTSILKAQHDDQQP
VVLRRHSSSDLARQKFGTMPLLPIRGDDSGATLLSANQTLRRLHNRRTLSMFFPMKSSQGSVEEQEELEE
PVYEEPVYEEVGAFPELIQDTSTSFSTTREWTVKPENPLTSQKSLDQPFLSKSSTLGQEERPPEPPPGPP
SKSSPQARGSLEEQLLQELSSLILRKGETTAGLGSPSQPSSPQSPSPTGLPTQTPGFPTQPPCTSSPPSS
QPLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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