NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS43146.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43146.1 Public Homo sapiens 3 ZXDC 24 110 108 CCDS HistoryNCBI Gene:79364Re-query CCDS DB by CCDS ID:43146.1Re-query CCDS DB by GeneID:79364See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43146.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336332.5 ENSP00000337694.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336332.5Link to Ensembl Protein Viewer:ENSP00000337694.5Re-query CCDS DB by Nucleotide ID:ENST00000336332Re-query CCDS DB by Protein ID:ENSP00000337694
Original member Current member NCBI NM_001040653.4 NP_001035743.1 Accepted alive Link to Nucleotide Sequence:NM_001040653.4Link to Protein Sequence:NP_001035743.1Re-query CCDS DB by Nucleotide ID:NM_001040653Re-query CCDS DB by Protein ID:NP_001035743Link to BLAST:NP_001035743.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035743.1 710 Q2QGD7-2 710 100% 0 0

Chromosomal Locations for CCDS 43146.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 126461529 126462220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126466155 126466325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126470895 126471025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126471973 126472051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126472153 126472305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126474959 126475865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2133 nt):
ATGGACCTCCCGGCGCTGCTCCCCGCCCCGACTGCGCGCGGAGGGCAACATGGCGGCGGCCCCGGCCCGC
TCCGCCGAGCCCCAGCGCCGCTCGGCGCGAGCCCCGCGCGCCGCCGCCTGCTACTGGTGCGGGGCCCTGA
AGATGGCGGGCCCGGGGCGCGGCCCGGGGAGGCCTCCGGGCCAAGCCCGCCGCCCGCCGAGGACGACAGC
GACGGCGACTCTTTCTTGGTGCTGCTGGAAGTGCCGCACGGCGGCGCTGCCGCCGAGGCTGCCGGATCAC
AGGAGGCCGAGCCTGGCTCCCGTGTCAACCTGGCGAGCCGCCCCGAGCAGGGCCCCAGCGGCCCGGCCGC
CCCCCCCGGCCCTGGCGTAGCCCCGGCGGGCGCCGTCACCATCAGCAGCCAGGACCTGCTGGTGCGTCTC
GACCGCGGCGTCCTCGCGCTGTCTGCGCCGCCCGGCCCCGCAACCGCGGGCGCCGCCGCTCCCCGCCGCG
CGCCCCAGGCCTCCGGCCCCAGCACGCCCGGCTACCGCTGCCCCGAGCCGCAGTGCGCGCTGGCCTTCGC
CAAGAAGCACCAGCTCAAGGTGCACCTGCTCACGCACGGCGGCGGTCAGGGCCGGCGGCCCTTCAAGTGC
CCACTGGAGGGCTGTGGTTGGGCCTTCACAACGTCCTACAAGCTCAAGCGGCACCTGCAGTCGCACGACA
AGCTGCGGCCCTTCGGCTGTCCAGTGGGCGGCTGTGGCAAGAAGTTCACTACGGTCTATAACCTCAAGGC
GCACATGAAGGGCCACGAGCAGGAGAGCCTGTTCAAGTGCGAGGTGTGCGCCGAGCGCTTCCCCACGCAC
GCCAAGCTCAGCTCCCACCAGCGCAGCCACTTCGAGCCCGAGCGCCCTTACAAGTGTGACTTTCCCGGCT
GTGAGAAGACATTTATCACAGTGAGTGCCCTGTTTTCCCATAACCGAGCCCACTTCAGGGAACAAGAGCT
CTTTTCCTGCTCCTTTCCTGGGTGCAGCAAGCAGTATGATAAAGCCTGTCGGCTGAAAATTCACCTGCGG
AGCCATACAGGTGAAAGACCATTTATTTGTGACTCTGACAGCTGTGGCTGGACCTTCACCAGCATGTCCA
AACTTCTAAGGCACAGAAGGAAACATGACGATGACCGGAGGTTTACCTGCCCTGTCGAGGGCTGTGGGAA
ATCATTCACCAGAGCAGAGCATCTGAAAGGCCACAGCATAACCCACCTAGGCACAAAGCCGTTCGAGTGT
CCTGTGGAAGGATGTTGCGCGAGGTTCTCCGCTCGTAGCAGTCTGTACATTCACTCTAAGAAACACGTGC
AGGATGTGGGTGCTCCGAAAAGCCGTTGCCCAGTTTCTACCTGCAACAGACTCTTCACCTCCAAGCACAG
CATGAAGGCGCACATGGTCAGACAGCACAGCCGGCGCCAAGATCTCTTACCTCAGCTAGAAGCTCCGAGT
TCTCTTACTCCCAGCAGTGAACTCAGCAGCCCAGGCCAAAGTGAGCTCACTAACATGGATCTTGCTGCAC
TCTTCTCTGACACACCTGCCAATGCTAGTGGTTCTGCAGGTGGGTCGGATGAGGCTCTGAACTCCGGAAT
CCTGACTATTGACGTCACTTCTGTGAGCTCCTCTCTGGGAGGGAACCTCCCTGCTAATAATAGCTCCCTA
GGGCCGATGGAACCCCTGGTCCTGGTGGCCCACAGTGATATTCCCCCAAGCCTGGACAGCCCTCTGGTTC
TCGGGACAGCAGCCACGGTTCTGCAGCAGGGCAGCTTCAGTGTGGATGACGTGCAGACTGTGAGTGCAGG
AGCATTAGGCTGTCTGGTGGCTCTGCCCATGAAGAACTTGAGTGACGACCCACTGGCTTTGACCTCCAAT
AGTAACTTAGCAGCACATATCACCACACCGACCTCTTCGAGCACCCCCCGAGAAAATGCCAGTGTCCCGG
AACTGCTGGCTCCAATCAAGGTGGAGCCGGACTCGCCTTCTCGCCCAGGAGCAGTTGGGCAGCAGGAAGG
AAGCCATGGGCTGCCCCAGTCCACGTTGCCCAGTCCAGCAGAGCAGCACGGTGCCCAGGACACAGAGCTC
AGTGCAGGCACTGGCAACTTCTATTTGGTATGA

Translation (710 aa):
MDLPALLPAPTARGGQHGGGPGPLRRAPAPLGASPARRRLLLVRGPEDGGPGARPGEASGPSPPPAEDDS
DGDSFLVLLEVPHGGAAAEAAGSQEAEPGSRVNLASRPEQGPSGPAAPPGPGVAPAGAVTISSQDLLVRL
DRGVLALSAPPGPATAGAAAPRRAPQASGPSTPGYRCPEPQCALAFAKKHQLKVHLLTHGGGQGRRPFKC
PLEGCGWAFTTSYKLKRHLQSHDKLRPFGCPVGGCGKKFTTVYNLKAHMKGHEQESLFKCEVCAERFPTH
AKLSSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLR
SHTGERPFICDSDSCGWTFTSMSKLLRHRRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITHLGTKPFEC
PVEGCCARFSARSSLYIHSKKHVQDVGAPKSRCPVSTCNRLFTSKHSMKAHMVRQHSRRQDLLPQLEAPS
SLTPSSELSSPGQSELTNMDLAALFSDTPANASGSAGGSDEALNSGILTIDVTSVSSSLGGNLPANNSSL
GPMEPLVLVAHSDIPPSLDSPLVLGTAATVLQQGSFSVDDVQTVSAGALGCLVALPMKNLSDDPLALTSN
SNLAAHITTPTSSSTPRENASVPELLAPIKVEPDSPSRPGAVGQQEGSHGLPQSTLPSPAEQHGAQDTEL
SAGTGNFYLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH