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Report for CCDS43230.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
43230.1 |
Public |
Homo sapiens |
4 |
CRACD |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:57482](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:43230.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:57482](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 4 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 43230.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000264229.11 |
ENSP00000264229.6 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000264229.11](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000264229.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000264229](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000264229](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000504228.6 |
ENSP00000423366.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000504228.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000423366.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000504228](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000423366](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000682029.1 |
ENSP00000507165.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000682029.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000507165.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000682029](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000507165](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001393381.1 |
NP_001380310.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001393381.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001380310.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001393381](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001380310](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001380310.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001393382.1 |
NP_001380311.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001393382.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001380311.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001393382](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001380311](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001380311.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_020722.2 |
NP_065773.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_020722.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_065773.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_020722](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_065773](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_065773.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 43230.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3702 nt): ATGGGAACCCGGGCATTTTCCCATGACAGTATTTTTATCCCTGATGGGGGAGCAGAAAGTGAGCAGACAG TTCAAGCAATGTCACAGGACAACATCCTGGGCAAAGTCAAAACTCTTCAGCAACAGTTGGGCAAGAATAT CAAGTTTGGGCAGCGGTCACCCAATGCCATTCCCATGAATAAGGCAAACAGTGGAGAGGCTAGCTTAGAA GAGGATCTGTTCCTGACCAGTCCCATGGAAATTGTGACTCAGCAGGACATCGTCCTCTCAGACGCAGAGA ACAAGTCCAGTGATACGCCAAGTTCTCTAAGTCCTCTGAATCTCCCTGGAGCTGGAAGTGAGATGGAAGA GAAGGTTGCTCCCGTTAAACCGTCTCGGCCAAAAAGGCACTTCTCTTCTGCTGGCACCATCGAAAGTGTC AACTTAGATGCCATCCCCCTGGCCATCGCTCGCCTGGACAACAGTGCCGCCAAGCACAAGCTGGCTGTTA AGCCAAAAAAACAGAGGGTGTCAAAGAAGCACAGGCGCCTTGCCCAGGATCCACAACATGAGCAAGGCGG CCTTGAGAGTCGGCCCTGCCTGGACCAGAACGGACACCCAGGCGAGGACAAGCCAACGTGGCACGAAGAG GAACCCAATCCGCTGGATTCCGAGGAAGAGAGAAGACGCCAAGAAGACTACTGGCGAGAACTGGAGGCCA AGTGCAAGCGGCAAAAGGCGGAAGCAGCCGAGAAGAGACGCCTAGAGGAGCAGAGGCTGCAGGCGCTGGA GAGGAGGCTTTGGGAAGAGAACAGAAGGCAGGAGCTCTTGGAGGAGGAGGGCGAGGGGCAGGAGCCGCCT CTAGAGGCGGAAAGGGCGCCGCGGGAAGAGCAGCAGCGGAGCCTGGAAGCGCCAGGTTGGGAGGACGCGG AGCGGAGGGAGCGTGAGGAGCGCGAGCGCCTGGAGGCGGAGGAGGAGCGAAGGCGTCTGCAGGCCCAGGC CCAAGCGGAGGAGAGGCGGCGGCTGGAGGAGGACGCCAGGCTGGAGGAGCGGAGGCGGCAGGAGGAGGAG GAAGGAAGATGCGCGGAGGAGCTCAAAAGGCAGGAGGAGGAGGAGGCTGAGGGATGGGAAGAGCTGGAAC AGCAGGAGGCGGAGGTGCAGGGGCCGCCCGAGGCGTTGGAGGAGACTGGGGAGGGCCGGCGGGGCGCGGA GGAGGAGGATCTGGGGGAAGAGGAGGAGGAGGGCCAGGCGCACCTGGAGGACTGGAGGGGGCAGCTCAGT GAGCTTCTGAACGACTTTGAGGAGAGGCTCGAAGACCAGGAACGCCTGAAACCCGAAGGACAAAGAGAAC ACTCCGAGGAGCCAGGTATTTGCGAGGAGCAGAACCCAGAGGCCGAGCGGCGAAGAGAGCAGCAGGGAAG GAGCGGGGATTTCCAGGGGGCCGATCGTCCTGGGCCCGAGGAAAAGAGAGAAGAAGGGGACACGGAGCCT CTCCTGAAACAAGAGGGGCCGGTGGAAGCCGCGCAGCCTCCGGTGGAGAGGAAAGAAGCCGCCGCCCTTG AACAAGGCCGCAAGGTGGAGGAGCTGCGGTGGCAGGAGGTGGACGAGAGACAGACCATGCCCCGGCCCTA CACGTTCCAGGTGTCCTCCGGAGGGAAGCAGATTCTCTTTCCCAAAGTCAACCTGAGCCCCGTGACGCCC GCAAAGGACACGGGGCTCACCGCTGCTCCCCAGGAACCAAAGGCCCCCAAAGCCAGCCCAGTCCAGCACG CCCTACCGTCGTCCCTGAGCGTTCCCCACACCGCCATTCTGGTCACGGGCGCGCAGCTCTGTGGCCCGGC AGTCAACCTGAGCCAGATCAAGGACACCGCGTGCAAGTCCCTCCTGGGCTTGGAGGAGAAGAAGCACGCG GAAGCCCCAGCTGGGGAGAACCCTCCCCGAGGCCCCGGCGACGCGAGGGCGGGCAGCGGGAAGGCTAAGC CCCGCCAGGAGTCTCCCAGCAGCGCGTCCGCACTCGCAGAATGGGCTTCCATTCGGTCCAGAATCCTGAA GAACGCAGAGAGTGACCCGCGCAGCAGCGAGAGGGACCAGTTGAGGCCCGGTGATGAGTCCACTCCCAGG GGCCGGTGTGATTCCCGCGGGAACCAACGGAAGACTCCGCCAGTCAATGCAAAGTTCTCTATTATGCCTG CCTGGCAGAAATTTTCCGATGGTGGCACGGAGACCTCCAAACAGAGCACGGAAGCTGAAAGCATACGAAA AAGACCCATGCTGGGACCCAGCGAAGAGACAGCCCCCCAGCCTCCTCCTGCTGGTGTTCGCGAGCTCGGG AAGGGTCCGGAGAAGTCGGAGATGCACCGGGAGCCCGCAGACACCACCGAGGGATGCAAATTTGCCAAAG ACCTCCCGTCTTTCCTTGTCCCAAGCCTTCCTTACCCTCCGCAGAAAGTGGTGGCCCACACAGAGTTCAC GACCTCGTCGGACAGCGAGACTGCAAACGGGATAGCAAAGCCAGACCCTGTGATGCCAGGTGGAGAGGAA AAAGCCTCACCGTTTGGAATAAAATTGAGAAGGACCAACTATTCCTTGCGCTTCAACTGCGACCAACAGG CAGAACAGAAGAAGAAGAAGAGGCACAGCAGCACCGGAGACAGCGCGGATGCAGGGCCGCCTGCAGCGGG GAGCGCTCGTGGAGAGAAAGAGATGGAGGGTGTGGCCCTCAAGCATGGTCCATCCCTCCCCCAAGAGCGG AAGCAAGCCCCTTCCACCCGGAGGGACTCCGCTGAACCTTCCAGCAGCCGCTCTGTTCCTGTGGCCCACC CTGGGCCTCCACCGGCCAGCAGCCAGACCCCGGCTCCGGAGCACGACAAGGCAGCAAACAAAATGCCACT GGCACAAAAGCCAGCACTGGCTCCCAAGCCCACCAGTCAGACCCCACCAGCATCCCCACTTTCCAAACTG AGCAGGCCCTACTTGGTAGAGCTGCTGTCTCGCCGAGCGGGGAGGCCGGACCCAGAGCCAAGTGAGCCGT CCAAGGAGGACCAGGAGAGCAGTGACCGCCGGCCACCCTCGCCCCCAGGCCCCGAGGAAAGGAAGGGACA GAAGAGGGACGAGGAGGAAGAGGCGACAGAGAGGAAACCTGCTTCCCCACCTCTGCCTGCCACTCAGCAA GAGAAACCTTCTCAAACACCCGAGGCCGGGAGGAAAGAGAAGCCGATGCTTCAGAGCAGACACTCCTTAG ATGGCTCCAAACTTACAGAGAAAGTGGAAACTGCTCAGCCGCTGTGGATAACGTTAGCACTGCAAAAGCA AAAGGGGTTTCGGGAGCAGCAGGCGACGCGGGAGGAGAGAAAGCAAGCCAGAGAGGCCAAACAGGCAGAA AAGCTCTCCAAAGAAAATGTCAGTGTCAGCGTGCAGCCTGGAAGCAGCAGTGTCAGCAGAGCAGGTTCCC TGCACAAGTCCACTGCTCTGCCAGAAGAGAAGAGGCCCGAGACTGCAGTGTCCAGGCTTGAGCGCAGAGA ACAGCTGAAAAAGGCCAATACTCTTCCTACGTCTGTGACAGTGGAGATCTCCGACTCGGCTCCCCCAGCG CCGCTGGTAAAAGAAGTCACCAAGAGGTTTTCCACCCCGGATGCTGCCCCCGTGTCAACAGAACCAGCCT GGCTGGCTTTGGCCAAAAGGAAAGCAAAGGCTTGGAGCGACTGTCCACAGATTATTAAGTAA
Translation (1233 aa): MGTRAFSHDSIFIPDGGAESEQTVQAMSQDNILGKVKTLQQQLGKNIKFGQRSPNAIPMNKANSGEASLE EDLFLTSPMEIVTQQDIVLSDAENKSSDTPSSLSPLNLPGAGSEMEEKVAPVKPSRPKRHFSSAGTIESV NLDAIPLAIARLDNSAAKHKLAVKPKKQRVSKKHRRLAQDPQHEQGGLESRPCLDQNGHPGEDKPTWHEE EPNPLDSEEERRRQEDYWRELEAKCKRQKAEAAEKRRLEEQRLQALERRLWEENRRQELLEEEGEGQEPP LEAERAPREEQQRSLEAPGWEDAERREREERERLEAEEERRRLQAQAQAEERRRLEEDARLEERRRQEEE EGRCAEELKRQEEEEAEGWEELEQQEAEVQGPPEALEETGEGRRGAEEEDLGEEEEEGQAHLEDWRGQLS ELLNDFEERLEDQERLKPEGQREHSEEPGICEEQNPEAERRREQQGRSGDFQGADRPGPEEKREEGDTEP LLKQEGPVEAAQPPVERKEAAALEQGRKVEELRWQEVDERQTMPRPYTFQVSSGGKQILFPKVNLSPVTP AKDTGLTAAPQEPKAPKASPVQHALPSSLSVPHTAILVTGAQLCGPAVNLSQIKDTACKSLLGLEEKKHA EAPAGENPPRGPGDARAGSGKAKPRQESPSSASALAEWASIRSRILKNAESDPRSSERDQLRPGDESTPR GRCDSRGNQRKTPPVNAKFSIMPAWQKFSDGGTETSKQSTEAESIRKRPMLGPSEETAPQPPPAGVRELG KGPEKSEMHREPADTTEGCKFAKDLPSFLVPSLPYPPQKVVAHTEFTTSSDSETANGIAKPDPVMPGGEE KASPFGIKLRRTNYSLRFNCDQQAEQKKKKRHSSTGDSADAGPPAAGSARGEKEMEGVALKHGPSLPQER KQAPSTRRDSAEPSSSRSVPVAHPGPPPASSQTPAPEHDKAANKMPLAQKPALAPKPTSQTPPASPLSKL SRPYLVELLSRRAGRPDPEPSEPSKEDQESSDRRPPSPPGPEERKGQKRDEEEEATERKPASPPLPATQQ EKPSQTPEAGRKEKPMLQSRHSLDGSKLTEKVETAQPLWITLALQKQKGFREQQATREERKQAREAKQAE KLSKENVSVSVQPGSSSVSRAGSLHKSTALPEEKRPETAVSRLERREQLKKANTLPTSVTVEISDSAPPA PLVKEVTKRFSTPDAAPVSTEPAWLALAKRKAKAWSDCPQIIK
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