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Report for CCDS43230.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43230.1 Public Homo sapiens 4 CRACD 24 110 108 CCDS HistoryNCBI Gene:57482Re-query CCDS DB by CCDS ID:43230.1Re-query CCDS DB by GeneID:57482See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43230.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264229.11 ENSP00000264229.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000264229.11Link to Ensembl Protein Viewer:ENSP00000264229.6Re-query CCDS DB by Nucleotide ID:ENST00000264229Re-query CCDS DB by Protein ID:ENSP00000264229
Original member Current member EBI ENST00000504228.6 ENSP00000423366.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000504228.6Link to Ensembl Protein Viewer:ENSP00000423366.1Re-query CCDS DB by Nucleotide ID:ENST00000504228Re-query CCDS DB by Protein ID:ENSP00000423366
Original member Current member EBI ENST00000682029.1 ENSP00000507165.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682029.1Link to Ensembl Protein Viewer:ENSP00000507165.1Re-query CCDS DB by Nucleotide ID:ENST00000682029Re-query CCDS DB by Protein ID:ENSP00000507165
Original member Current member NCBI NM_001393381.1 NP_001380310.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001393381.1Link to Protein Sequence:NP_001380310.1Re-query CCDS DB by Nucleotide ID:NM_001393381Re-query CCDS DB by Protein ID:NP_001380310Link to BLAST:NP_001380310.1
Original member Current member NCBI NM_001393382.1 NP_001380311.1 Accepted alive Link to Nucleotide Sequence:NM_001393382.1Link to Protein Sequence:NP_001380311.1Re-query CCDS DB by Nucleotide ID:NM_001393382Re-query CCDS DB by Protein ID:NP_001380311Link to BLAST:NP_001380311.1
Original member Current member NCBI NM_020722.2 NP_065773.1 Accepted alive Link to Nucleotide Sequence:NM_020722.2Link to Protein Sequence:NP_065773.1Re-query CCDS DB by Nucleotide ID:NM_020722Re-query CCDS DB by Protein ID:NP_065773Link to BLAST:NP_065773.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001380310.1 1233 Q6ZU35 1233 100% 0 0
NP_001380311.1 1233 Q6ZU35 1233 100% 0 0
NP_065773.1 1233 Q6ZU35 1233 100% 0 0

Chromosomal Locations for CCDS 43230.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 56298230 56298349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56307535 56307699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56310666 56310734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56313197 56313379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56314040 56316689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56323377 56323567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56324104 56324266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56327644 56327804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3702 nt):
ATGGGAACCCGGGCATTTTCCCATGACAGTATTTTTATCCCTGATGGGGGAGCAGAAAGTGAGCAGACAG
TT
CAAGCAATGTCACAGGACAACATCCTGGGCAAAGTCAAAACTCTTCAGCAACAGTTGGGCAAGAATAT
C
AAGTTTGGGCAGCGGTCACCCAATGCCATTCCCATGAATAAGGCAAACAGTGGAGAGGCTAGCTTAGAA
GAG
GATCTGTTCCTGACCAGTCCCATGGAAATTGTGACTCAGCAGGACATCGTCCTCTCAGACGCAGAGA
AC
AAGTCCAGTGATACGCCAAGTTCTCTAAGTCCTCTGAATCTCCCTGGAGCTGGAAGTGAGATGGAAGA
G
AAGGTTGCTCCCGTTAAACCGTCTCGGCCAAAAAGGCACTTCTCTTCTGCTGGCACCATCGAAAGTGTC
AAC
TTAGATGCCATCCCCCTGGCCATCGCTCGCCTGGACAACAGTGCCGCCAAGCACAAGCTGGCTGTTA
AG
CCAAAAAAACAGAGGGTGTCAAAGAAGCACAGGCGCCTTGCCCAGGATCCACAACATGAGCAAGGCGG
C
CTTGAGAGTCGGCCCTGCCTGGACCAGAACGGACACCCAGGCGAGGACAAGCCAACGTGGCACGAAGAG
GAA
CCCAATCCGCTGGATTCCGAGGAAGAGAGAAGACGCCAAGAAGACTACTGGCGAGAACTGGAGGCCA
AG
TGCAAGCGGCAAAAGGCGGAAGCAGCCGAGAAGAGACGCCTAGAGGAGCAGAGGCTGCAGGCGCTGGA
G
AGGAGGCTTTGGGAAGAGAACAGAAGGCAGGAGCTCTTGGAGGAGGAGGGCGAGGGGCAGGAGCCGCCT
CTA
GAGGCGGAAAGGGCGCCGCGGGAAGAGCAGCAGCGGAGCCTGGAAGCGCCAGGTTGGGAGGACGCGG
AG
CGGAGGGAGCGTGAGGAGCGCGAGCGCCTGGAGGCGGAGGAGGAGCGAAGGCGTCTGCAGGCCCAGGC
C
CAAGCGGAGGAGAGGCGGCGGCTGGAGGAGGACGCCAGGCTGGAGGAGCGGAGGCGGCAGGAGGAGGAG
GAA
GGAAGATGCGCGGAGGAGCTCAAAAGGCAGGAGGAGGAGGAGGCTGAGGGATGGGAAGAGCTGGAAC
AG
CAGGAGGCGGAGGTGCAGGGGCCGCCCGAGGCGTTGGAGGAGACTGGGGAGGGCCGGCGGGGCGCGGA
G
GAGGAGGATCTGGGGGAAGAGGAGGAGGAGGGCCAGGCGCACCTGGAGGACTGGAGGGGGCAGCTCAGT
GAG
CTTCTGAACGACTTTGAGGAGAGGCTCGAAGACCAGGAACGCCTGAAACCCGAAGGACAAAGAGAAC
AC
TCCGAGGAGCCAGGTATTTGCGAGGAGCAGAACCCAGAGGCCGAGCGGCGAAGAGAGCAGCAGGGAAG
G
AGCGGGGATTTCCAGGGGGCCGATCGTCCTGGGCCCGAGGAAAAGAGAGAAGAAGGGGACACGGAGCCT
CTC
CTGAAACAAGAGGGGCCGGTGGAAGCCGCGCAGCCTCCGGTGGAGAGGAAAGAAGCCGCCGCCCTTG
AA
CAAGGCCGCAAGGTGGAGGAGCTGCGGTGGCAGGAGGTGGACGAGAGACAGACCATGCCCCGGCCCTA
C
ACGTTCCAGGTGTCCTCCGGAGGGAAGCAGATTCTCTTTCCCAAAGTCAACCTGAGCCCCGTGACGCCC
GCA
AAGGACACGGGGCTCACCGCTGCTCCCCAGGAACCAAAGGCCCCCAAAGCCAGCCCAGTCCAGCACG
CC
CTACCGTCGTCCCTGAGCGTTCCCCACACCGCCATTCTGGTCACGGGCGCGCAGCTCTGTGGCCCGGC
A
GTCAACCTGAGCCAGATCAAGGACACCGCGTGCAAGTCCCTCCTGGGCTTGGAGGAGAAGAAGCACGCG
GAA
GCCCCAGCTGGGGAGAACCCTCCCCGAGGCCCCGGCGACGCGAGGGCGGGCAGCGGGAAGGCTAAGC
CC
CGCCAGGAGTCTCCCAGCAGCGCGTCCGCACTCGCAGAATGGGCTTCCATTCGGTCCAGAATCCTGAA
G
AACGCAGAGAGTGACCCGCGCAGCAGCGAGAGGGACCAGTTGAGGCCCGGTGATGAGTCCACTCCCAGG
GGC
CGGTGTGATTCCCGCGGGAACCAACGGAAGACTCCGCCAGTCAATGCAAAGTTCTCTATTATGCCTG
CC
TGGCAGAAATTTTCCGATGGTGGCACGGAGACCTCCAAACAGAGCACGGAAGCTGAAAGCATACGAAA
A
AGACCCATGCTGGGACCCAGCGAAGAGACAGCCCCCCAGCCTCCTCCTGCTGGTGTTCGCGAGCTCGGG
AAG
GGTCCGGAGAAGTCGGAGATGCACCGGGAGCCCGCAGACACCACCGAGGGATGCAAATTTGCCAAAG
AC
CTCCCGTCTTTCCTTGTCCCAAGCCTTCCTTACCCTCCGCAGAAAGTGGTGGCCCACACAGAGTTCAC
G
ACCTCGTCGGACAGCGAGACTGCAAACGGGATAGCAAAGCCAGACCCTGTGATGCCAGGTGGAGAGGAA
AAA
GCCTCACCGTTTGGAATAAAATTGAGAAGGACCAACTATTCCTTGCGCTTCAACTGCGACCAACAGG
CA
GAACAGAAGAAGAAGAAGAGGCACAGCAGCACCGGAGACAGCGCGGATGCAGGGCCGCCTGCAGCGGG
G
AGCGCTCGTGGAGAGAAAGAGATGGAGGGTGTGGCCCTCAAGCATGGTCCATCCCTCCCCCAAGAGCGG
AAG
CAAGCCCCTTCCACCCGGAGGGACTCCGCTGAACCTTCCAGCAGCCGCTCTGTTCCTGTGGCCCACC
CT
GGGCCTCCACCGGCCAGCAGCCAGACCCCGGCTCCGGAGCACGACAAGGCAGCAAACAAAATGCCACT
G
GCACAAAAGCCAGCACTGGCTCCCAAGCCCACCAGTCAGACCCCACCAGCATCCCCACTTTCCAAACTG
AGC
AGGCCCTACTTGGTAGAGCTGCTGTCTCGCCGAGCGGGGAGGCCGGACCCAGAGCCAAGTGAGCCGT
CC
AAGGAGGACCAGGAGAGCAGTGACCGCCGGCCACCCTCGCCCCCAGGCCCCGAGGAAAGGAAGGGACA
G
AAGAGGGACGAGGAGGAAGAGGCGACAGAGAGGAAACCTGCTTCCCCACCTCTGCCTGCCACTCAGCAA
GAG
AAACCTTCTCAAACACCCGAGGCCGGGAGGAAAGAGAAGCCGATGCTTCAGAGCAGACACTCCTTAG
AT
GGCTCCAAACTTACAGAGAAAGTGGAAACTGCTCAGCCGCTGTGGATAACGTTAGCACTGCAAAAGCA
A
AAGGGGTTTCGGGAGCAGCAGGCGACGCGGGAGGAGAGAAAGCAAGCCAGAGAGGCCAAACAGGCAGAA
AAG
CTCTCCAAAGAAAATGTCAGTGTCAGCGTGCAGCCTGGAAGCAGCAGTGTCAGCAGAGCAGGTTCCC
TG
CACAAGTCCACTGCTCTGCCAGAAGAGAAGAGGCCCGAGACTGCAGTGTCCAGGCTTGAGCGCAGAGA
A
CAGCTGAAAAAGGCCAATACTCTTCCTACGTCTGTGACAGTGGAGATCTCCGACTCGGCTCCCCCAGCG
CCG
CTGGTAAAAGAAGTCACCAAGAGGTTTTCCACCCCGGATGCTGCCCCCGTGTCAACAGAACCAGCCT
GG
CTGGCTTTGGCCAAAAGGAAAGCAAAGGCTTGGAGCGACTGTCCACAGATTATTAAGTAA


Translation (1233 aa):
MGTRAFSHDSIFIPDGGAESEQTVQAMSQDNILGKVKTLQQQLGKNIKFGQRSPNAIPMNKANSGEASLE
E
DLFLTSPMEIVTQQDIVLSDAENK
SSDTPSSLSPLNLPGAGSEMEEKVAPVKPSRPKRHFSSAGTIESV
N
LDAIPLAIARLDNSAAKHKLAVKPKKQRVSKKHRRLAQ
DPQHEQGGLESRPCLDQNGHPGEDKPTWHEE
E
PNPLDSEEERRRQEDYWRELEAKCKRQKAEAAEKRRLEEQRLQALERRLWEENRRQELLEEEGEGQEPP
L
EAERAPREEQQRSLEAPGWEDAERREREERERLEAEEERRRLQAQAQAEERRRLEEDARLEERRRQEEE
E
GRCAEELKRQEEEEAEGWEELEQQEAEVQGPPEALEETGEGRRGAEEEDLGEEEEEGQAHLEDWRGQLS
E
LLNDFEERLEDQERLKPEGQREHSEEPGICEEQNPEAERRREQQGRSGDFQGADRPGPEEKREEGDTEP
L
LKQEGPVEAAQPPVERKEAAALEQGRKVEELRWQEVDERQTMPRPYTFQVSSGGKQILFPKVNLSPVTP
A
KDTGLTAAPQEPKAPKASPVQHALPSSLSVPHTAILVTGAQLCGPAVNLSQIKDTACKSLLGLEEKKHA
E
APAGENPPRGPGDARAGSGKAKPRQESPSSASALAEWASIRSRILKNAESDPRSSERDQLRPGDESTPR
G
RCDSRGNQRKTPPVNAKFSIMPAWQKFSDGGTETSKQSTEAESIRKRPMLGPSEETAPQPPPAGVRELG
K
GPEKSEMHREPADTTEGCKFAKDLPSFLVPSLPYPPQKVVAHTEFTTSSDSETANGIAKPDPVMPGGEE
K
ASPFGIKLRRTNYSLRFNCDQQAEQKKKKRHSSTGDSADAGPPAAGSARGEKEMEGVALKHGPSLPQER
K
QAPSTRRDSAEPSSSRSVPVAHPGPPPASSQTPAPEHDKAANKMPLAQKPALAPKPTSQTPPASPLSKL
S
RPYLVELLSRRAGRPDPEPSEPSKEDQESSDRRPPSPPGPEERKGQKRDEEEEATERKPASPPLPATQQ
E
KPSQTPEAGRK
EKPMLQSRHSLDGSKLTEKVETAQPLWITLALQKQKGFREQQATREERKQAREAKQAE
K
LSKEN
VSVSVQPGSSSVSRAGSLHKSTALPEEKRPETAVSRLERREQLKKANTLPTSVTVEISDSAPPA
P
LVKEVTKRFSTPDAAPVSTEPAWLALAKRKAKAWSDCPQIIK




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser