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Report for CCDS4330.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4330.1 Public Homo sapiens 5 GEMIN5 24 110 108 CCDS HistoryNCBI Gene:25929Re-query CCDS DB by CCDS ID:4330.1Re-query CCDS DB by GeneID:25929See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4330.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285873.8 ENSP00000285873.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000285873.8Link to Ensembl Protein Viewer:ENSP00000285873.6Re-query CCDS DB by Nucleotide ID:ENST00000285873Re-query CCDS DB by Protein ID:ENSP00000285873
Original member Current member NCBI NM_015465.5 NP_056280.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015465.5Link to Protein Sequence:NP_056280.2Re-query CCDS DB by Nucleotide ID:NM_015465Re-query CCDS DB by Protein ID:NP_056280Link to BLAST:NP_056280.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056280.2 1508 Q8TEQ6 1508 100% 0 0

Chromosomal Locations for CCDS 4330.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 154888210 154888377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154889321 154889417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154891241 154891742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154892387 154892549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154896092 154896343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154898440 154898650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154899191 154899310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154901339 154901486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154902539 154902676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154903080 154903175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154904507 154904629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154905363 154905476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154907591 154907818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154911727 154911898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154912899 154913038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154916998 154917179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154917931 154918004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154919967 154920103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154921343 154921425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154924469 154924554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154925862 154926074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154927385 154927550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154928527 154928659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154931458 154931577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154932099 154932250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154935841 154936022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154937025 154937185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154937968 154938133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4527 nt):
ATGGGGCAGGAGCCGCGGACGCTGCCGCCCTCCCCCAACTGGTACTGCGCCCGCTGCAGCGATGCCGTGC
CCGGGGGCCTCTTTGGCTTCGCCGCGCGGACCTCCGTCTTCCTTGTCCGCGTGGGCCCGGGCGCAGGCGA
GAGTCCAGGGACACCCCCGTTTCGAGTCATAGGAGAGTTGGTGGGACACACCGAAAGGGTCTCTGGCTTC
ACATTTTCTCATCACCCTGGTCAGTACAACCTCTGTGCCACCAGCTCCGACGATGGGACTGTGAAAATAT
GGGATGTAGAGACAAAAACAGTTGTGACAGAACATGCACTCCATCAGCATACGATATCAACATTACATTG
GTCTCCTCGAGTAAAGGACTTAATAGTATCTGGGGATGAAAAAGGAGTAGTTTTCTGTTACTGGTTTAAC
AGAAATGACAGCCAGCACCTCTTTATAGAACCCAGGACAATTTTCTGTCTTACTTGTTCACCTCATCATG
AAGATTTAGTAGCCATTGGCTACAAGGATGGCATAGTGGTGATAATTGACATCAGTAAGAAAGGAGAAGT
TATTCATAGGCTTCGAGGCCATGATGATGAAATCCACTCCATAGCCTGGTGTCCCCTGCCTGGTGAAGAT
TGTTTATCTATAAACCAAGAGGAAACTTCAGAAGAAGCTGAAATTACCAACGGGAATGCTGTAGCACAAG
CTCCAGTAACAAAAGGTTGCTACTTAGCCACTGGAAGCAAAGATCAAACCATTCGAATCTGGAGCTGTTC
TAGAGGCCGAGGGGTGATGATTTTGAAATTGCCCTTTCTGAAGAGAAGAGGAGGGGGTATAGACCCAACT
GTTAAAGAGCGCCTTTGGTTGACACTCCATTGGCCCAGCAATCAACCAACACAGCTGGTATCTAGCTGTT
TTGGAGGTGAACTGTTGCAATGGGATCTCACTCAATCTTGGAGACGGAAATACACCCTCTTCAGTGCCTC
ATCAGAAGGGCAAAATCATTCAAGAATTGTGTTTAATTTATGTCCTTTACAAACAGAGGATGACAAACAG
CTATTACTTTCTACATCAATGGATAGAGATGTAAAATGTTGGGACATAGCCACCTTGGAGTGCAGCTGGA
CCCTTCCTTCCCTTGGTGGGTTTGCATACAGCCTGGCTTTCTCTTCTGTGGACATAGGCTCTTTGGCCAT
AGGTGTTGGGGATGGCATGATCCGTGTATGGAATACACTCTCCATAAAGAACAACTATGATGTGAAAAAT
TTTTGGCAAGGCGTGAAGTCCAAGGTTACAGCGCTGTGCTGGCACCCAACCAAGGAAGGTTGCTTAGCTT
TTGGAACTGATGATGGAAAAGTGGGATTGTATGACACCTACTCCAACAAGCCTCCACAGATTTCTAGCAC
ATATCATAAGAAGACTGTATATACTTTAGCCTGGGGGCCACCAGTACCCCCCATGTCACTTGGAGGAGAA
GGAGACAGACCTTCCCTTGCTTTATACAGCTGTGGAGGAGAAGGGATTGTCTTACAGCATAATCCCTGGA
AGCTTAGTGGAGAAGCCTTTGACATCAACAAACTCATCAGGGACACCAATTCAATCAAATACAAATTGCC
TGTACACACAGAGATAAGTTGGAAAGCAGATGGCAAAATCATGGCTCTTGGCAATGAAGATGGATCAATA
GAAATATTTCAGATTCCCAACCTGAAACTGATCTGTACTATCCAACAGCATCACAAGCTTGTGAATACCA
TTAGCTGGCATCATGAGCATGGCAGCCAGCCAGAATTGAGCTATCTGATGGCCTCTGGCTCCAACAATGC
AGTCATTTACGTGCACAACCTGAAGACTGTCATAGAGAGCAGCCCTGAGTCTCCAGTGACCATTACAGAG
CCCTACCGGACCCTCTCAGGGCATACGGCCAAGATTACCAGTGTGGCGTGGAGCCCACATCATGATGGAA
GGCTGGTATCTGCTTCCTATGATGGTACAGCCCAGGTGTGGGATGCTCTCCGGGAAGAGCCCCTGTGCAA
TTTCCGAGGACATCGAGGTCGACTGCTTTGTGTGGCATGGTCTCCTTTGGATCCAGACTGCATCTATTCA
GGGGCAGATGACTTTTGTGTGCACAAGTGGCTCACTTCCATGCAAGATCATTCCCGGCCTCCTCAAGGCA
AAAAAAGTATTGAATTGGAGAAAAAACGGCTCTCTCAACCTAAGGCAAAGCCCAAAAAGAAGAAAAAGCC
CACCTTGAGAACTCCTGTAAAGCTGGAATCGATTGATGGAAATGAAGAAGAAAGCATGAAGGAGAACTCA
GGACCTGTTGAGAATGGTGTGTCAGACCAAGAAGGGGAGGAGCAAGCACGGGAGCCGGAATTACCCTGTG
GCCTTGCTCCAGCGGTTTCTAGAGAACCAGTTATCTGCACTCCAGTTTCCTCAGGCTTTGAAAAGTCAAA
AGTCACCATTAATAACAAAGTCATTTTACTGAAAAAGGAGCCACCAAAAGAGAAGCCAGAAACCTTAATC
AAGAAGAGAAAAGCTCGTTCCTTGCTTCCCCTGAGTACAAGCCTGGACCACAGATCCAAAGAGGAGCTTC
ATCAGGACTGTTTGGTACTAGCAACTGCAAAGCACTCCAGAGAGCTGAATGAAGATGTGTCTGCTGATGT
TGAGGAAAGATTTCATCTGGGGCTTTTCACAGACAGGGCTACCCTGTATAGAATGATTGATATTGAAGGA
AAAGGTCACTTAGAAAATGGCCACCCTGAGTTATTTCACCAGCTTATGCTTTGGAAAGGAGATCTCAAAG
GTGTTCTCCAGACTGCAGCAGAAAGAGGGGAGCTGACAGACAACCTTGTGGCTATGGCACCAGCAGCTGG
CTACCATGTGTGGCTATGGGCTGTGGAAGCTTTTGCCAAACAGCTGTGTTTTCAGGATCAGTATGTCAAG
GCTGCTTCTCACCTACTTTCCATCCACAAAGTGTATGAAGCGGTGGAGCTGCTCAAGTCAAACCATTTTT
ACAGGGAAGCTATTGCGATTGCCAAGGCCCGGCTGCGCCCGGAGGACCCAGTCCTGAAGGACTTGTACCT
CAGCTGGGGAACCGTCCTAGAAAGAGATGGCCACTATGCTGTAGCTGCCAAATGCTATTTAGGGGCCACT
TGTGCTTATGATGCAGCCAAAGTTTTGGCCAAAAAGGGGGATGCGGCATCACTTAGAACGGCTGCAGAGT
TGGCTGCCATCGTAGGAGAGGATGAGTTGTCTGCTTCCCTGGCTCTCAGATGTGCCCAAGAGCTGCTTCT
GGCCAACAACTGGGTGGGAGCCCAGGAAGCCCTGCAGCTGCATGAAAGTCTACAGGGTCAGAGATTGGTG
TTTTGCCTTCTGGAGCTACTGTCCAGGCATCTGGAGGAAAAGCAGCTTTCAGAGGGCAAAAGCTCCTCCT
CTTACCACACTTGGAACACGGGCACCGAAGGGCCTTTCGTGGAGAGGGTGACTGCAGTGTGGAAGAGCAT
CTTCAGCCTTGACACCCCTGAGCAGTATCAGGAAGCCTTTCAGAAGCTGCAGAACATCAAGTACCCATCT
GCTACAAATAACACACCTGCCAAACAGCTCCTGCTTCACATTTGCCATGACTTGACCCTGGCAGTGCTGA
GCCAACAGATGGCCTCCTGGGACGAGGCTGTGCAGGCGCTCCTTCGGGCGGTGGTCCGGAGCTATGACTC
AGGGAGCTTCACCATCATGCAGGAAGTGTACTCAGCCTTTCTCCCTGACGGCTGTGACCACCTAAGAGAC
AAGTTGGGGGACCATCAATCCCCTGCCACACCAGCTTTCAAAAGTTTGGAGGCCTTTTTTCTTTATGGGC
GTCTGTATGAATTCTGGTGGTCTCTCTCCAGACCTTGCCCAAATTCCAGTGTCTGGGTAAGGGCTGGTCA
CAGAACACTCTCTGTTGAGCCAAGCCAGCAGTTAGACACTGCCAGCACTGAAGAAACGGACCCTGAAACT
TCTCAGCCAGAGCCAAACAGGCCTTCAGAACTAGACTTGAGACTCACAGAAGAAGGTGAGCGAATGCTGA
GTACTTTTAAGGAGCTCTTTTCAGAAAAGCATGCCAGTCTCCAAAACTCACAGAGAACTGTTGCTGAAGT
CCAAGAGACCTTGGCAGAAATGATCCGACAACACCAAAAGAGTCAACTCTGTAAATCCACAGCAAATGGT
CCTGATAAGAATGAACCGGAAGTAGAAGCAGAGCAGCCCCTCTGCAGTTCTCAGAGCCAGTGTAAAGAAG
AAAAAAATGAGCCACTTTCTCTGCCTGAGTTAACCAAAAGGCTTACCGAGGCAAATCAGAGAATGGCGAA
ATTTCCTGAGAGCATTAAGGCCTGGCCCTTCCCAGATGTGCTGGAGTGCTGCCTCGTCCTGCTTCTCATC
AGGTCCCACTTTCCTGGCTGTCTGGCCCAGGAAATGCAGCAGCAGGCCCAAGAGCTCCTTCAGAAATACG
GCAACACGAAAACTTACAGAAGACACTGCCAGACCTTCTGTATGTGA

Translation (1508 aa):
MGQEPRTLPPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPGAGESPGTPPFRVIGELVGHTERVSGF
TFSHHPGQYNLCATSSDDGTVKIWDVETKTVVTEHALHQHTISTLHWSPRVKDLIVSGDEKGVVFCYWFN
RNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIIDISKKGEVIHRLRGHDDEIHSIAWCPLPGED
CLSINQEETSEEAEITNGNAVAQAPVTKGCYLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGGGIDPT
VKERLWLTLHWPSNQPTQLVSSCFGGELLQWDLTQSWRRKYTLFSASSEGQNHSRIVFNLCPLQTEDDKQ
LLLSTSMDRDVKCWDIATLECSWTLPSLGGFAYSLAFSSVDIGSLAIGVGDGMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPTKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGPPVPPMSLGGE
GDRPSLALYSCGGEGIVLQHNPWKLSGEAFDINKLIRDTNSIKYKLPVHTEISWKADGKIMALGNEDGSI
EIFQIPNLKLICTIQQHHKLVNTISWHHEHGSQPELSYLMASGSNNAVIYVHNLKTVIESSPESPVTITE
PYRTLSGHTAKITSVAWSPHHDGRLVSASYDGTAQVWDALREEPLCNFRGHRGRLLCVAWSPLDPDCIYS
GADDFCVHKWLTSMQDHSRPPQGKKSIELEKKRLSQPKAKPKKKKKPTLRTPVKLESIDGNEEESMKENS
GPVENGVSDQEGEEQAREPELPCGLAPAVSREPVICTPVSSGFEKSKVTINNKVILLKKEPPKEKPETLI
KKRKARSLLPLSTSLDHRSKEELHQDCLVLATAKHSRELNEDVSADVEERFHLGLFTDRATLYRMIDIEG
KGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDNLVAMAPAAGYHVWLWAVEAFAKQLCFQDQYVK
AASHLLSIHKVYEAVELLKSNHFYREAIAIAKARLRPEDPVLKDLYLSWGTVLERDGHYAVAAKCYLGAT
CAYDAAKVLAKKGDAASLRTAAELAAIVGEDELSASLALRCAQELLLANNWVGAQEALQLHESLQGQRLV
FCLLELLSRHLEEKQLSEGKSSSSYHTWNTGTEGPFVERVTAVWKSIFSLDTPEQYQEAFQKLQNIKYPS
ATNNTPAKQLLLHICHDLTLAVLSQQMASWDEAVQALLRAVVRSYDSGSFTIMQEVYSAFLPDGCDHLRD
KLGDHQSPATPAFKSLEAFFLYGRLYEFWWSLSRPCPNSSVWVRAGHRTLSVEPSQQLDTASTEETDPET
SQPEPNRPSELDLRLTEEGERMLSTFKELFSEKHASLQNSQRTVAEVQETLAEMIRQHQKSQLCKSTANG
PDKNEPEVEAEQPLCSSQSQCKEEKNEPLSLPELTKRLTEANQRMAKFPESIKAWPFPDVLECCLVLLLI
RSHFPGCLAQEMQQQAQELLQKYGNTKTYRRHCQTFCM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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