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Report for CCDS43501.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43501.1 Public Homo sapiens 6 TBC1D32 24 110 108 CCDS HistoryNCBI Gene:221322Re-query CCDS DB by CCDS ID:43501.1Re-query CCDS DB by GeneID:221322See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 43501.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398212.7 ENSP00000381270.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398212.7Link to Ensembl Protein Viewer:ENSP00000381270.2Re-query CCDS DB by Nucleotide ID:ENST00000398212Re-query CCDS DB by Protein ID:ENSP00000381270
Original member Current member NCBI NM_152730.6 NP_689943.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152730.6Link to Protein Sequence:NP_689943.4Re-query CCDS DB by Nucleotide ID:NM_152730Re-query CCDS DB by Protein ID:NP_689943Link to BLAST:NP_689943.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689943.4 1257 Q96NH3-1 1257 100% 0 0

Chromosomal Locations for CCDS 43501.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 121080771 121080890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121090853 121091041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121106023 121106163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121112505 121112659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121113062 121113177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121115172 121115241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121126378 121126461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121131627 121131752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121160010 121160103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121160948 121161056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121205075 121205163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121223236 121223352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121239070 121239188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121241465 121241552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121242201 121242339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121255328 121255410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121256084 121256285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121279121 121279245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121281544 121281686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121283818 121283910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121292053 121292193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121294570 121294660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121299446 121299505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121303617 121303761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121304365 121304426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121304522 121304625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121304755 121304833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121307976 121308101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121310779 121310847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121317495 121317672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121321633 121321794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121334276 121334430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3774 nt):
ATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCCAGAGCGTGA
AGGAGAAAATCACGGGTGCCCCTTCCCTGGAGTGTGCCGAAGAGATTCTTTTACATCTGGAGGAAACTGA
TGAAAATTTTCACAACTATGAATTTGTGAAATACCTCAGGCAGCATATAGGCAACACTTTGGGTTCTATG
ATTGAAGAAGAAATGGAAAAATGCACATCTGATCGGAATCAGGGTGAAGAATGCGGCTATGATACAGTTG
TACAGCAGGTCACTAAAAGAACTCAAGAATCTAAAGAGTACAAAGAAATGATGCATTACCTGAAGAACAT
TATGATAGCTGTGGTCGAGTCTATGATTAACAAGTTTGAAGAAGATGAGACACGAAATCAAGAAAGGCAG
AAAAAAATCCAAAAGGAGAAAAGCCATAGTTACCGCACAGACAATTGCTCTGATAGTGATTCATCATTGA
ATCAGAGTTACAAATTTTGTCAAGGAAAATTACAATTGATTTTAGACCAGTTGGATCCTGGGCAACCTAA
AGAGGTGAGATATGAAGCCTTGCAAACATTATGTTCAGCTCCTCCATCTGATGTCCTCAACTGTGAAAAT
TGGACTACTCTCTGCGAAAAACTGACCGTGTCTCTTTCAGATCCTGATCCTGTGTTTAGTGACCGGATTT
TAAAATTCTGTGCACAGACATTTTTGCTTTCTCCATTACATATGACCAAGGAAATTTATACAAGCTTAGC
TAAGTATTTGGAGTCATACTTTCTTTCTAGGGAAAATCATATTCCTACTCTTTCAGCTGGTGTAGATATA
ACTAATCCTAATATGACTCGCTTACTTAAAAAGGTTCGTCTTCTAAATGAATATCAGAAAGAAGCTCCAT
CTTTCTGGATTCGTCATCCAGAGAAGTATATGGAAGAAATTGTGGAGAGTACTTTGTCCTTGTTAACAGT
TAAACATAATCAAAGCCATGTTGTCTCACAAAAGATTTTGGATCCGATCTACTTTTTTGCATTAGTTGAT
ACCAAGGCTGTGTGGTTCAAAAAGTGGATGCATGCACATTATAGCAGAACTACAGTATTAAGACTTCTTG
AAACGAAATATAAGTCTCTGGTAACTACAGCCATTCAACAGTGTGTTCAGTACTTTGAAATGTGTAAGAC
TAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCAGAAAACTTTCTACTACTTA
GGACAAGAATTACAATATATTTATTTCATTCACTCACTGTGCCTTTTAGGAAGATTATTGATCTATAAAC
AAGGCAGAAAACTATTTCCTATTAAGCTGAAGAATAAAAAAGGTTTGGTATCCCTCATAGATCTGCTTGT
TCTTTTTACCCAACTTATCTATTACTCACCAAGTTGTCCAAAGATGACATCAGCTGCCCATTCAGAGAAT
TACTCTCCTGCAAGTATGGTGACTGAAGTTCTGTGGATACTCAGTGATCAAAAAGAATGTGCAGTGGAAT
GCTTATATAACAACATTGTAATAGAGACACTTCTTCAGCCTATTCACAATTTAATGAAAGGAAATGAGGC
ATCTCCAAATTGCTCTGAGACAGCTTTAATTCATATAGCTGGTATTTTGGCAAGAATTGCATCTGTAGAA
GAAGGGCTTATTTTACTCCTTTATGGAGCAAATATGAACTCTTCTGAAGAAAGTCCTACAGGTGCTCATA
TAATTGCCCAGTTTTCGAAAAAACTTCTCGATGAAGATATTTCTATATTTTCTGGATCAGAAATGTTGCC
TGTGGTTAAAGGAGCTTTTATTTCTGTGTGTCGTCACATATATAGTACATGTGAAGGTTTGCAGGTGTTA
ATCACTTATAATTTGCATGAATCTATAGCAAAGGCATGGAAAAAGACAAGTTTGCTATCAGAAAGAATTC
CTACTCCAGTAGAGGGTTCTGATTCTGTTTCTTCAGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGA
AGATAATTTGTTAGATGATTTACTACATTTTGCTGCCACCCCCAAAGGATTACTACTTCTTCAAAGAACA
GGTGCTATCAATGAATGTGTGACATTTATATTCAATCGATATGCAAAAAAATTACAGGTCAGCAGGCATA
AAAAATTTGGCTATGGAGTTTTGGTTACACGAGTGGCATCAACAGCAGCAGGTGGCATTGCACTAAAAAA
GTCAGGGTTTATTAATGAACTTATAACTGAATTATGGTCCAATCTGGAATATGGAAGAGATGATGTTAGG
GTAACCCATCCCAGAACTACTCCAGTGGATCCTATTGACCGAAGCTGTCAAAAGTCTTTTTTAGCACTGG
TGAACTTGTTATCCTATCCTGCTATTTATGAGCTTGTAAGGAATCAAGATCTTCCTAATAAAACAGAATA
TTCTCTTCGTGAAGTCCCAACATGTGTTATTGATATTATTGATAGACTTATAATTTTGAATTCTGAAGCT
AAGATTCGTTCTTTATTCAACTATGAACAATCACATATCTTTGGTCTAAGGGACTTTATAATTGATGGCT
TATCAGTGGAGAGAAATCATGTTCTTGTTAGAATAAATCTTGTTGGTGGGCCATTGGAACGGATTTTGCC
TCCGAGGTTACTCGAAAAGAGTGATAATCCATATCCTTGGCCAATGTTTTCATCATATCCATTGCCAAAC
TGCTATCTGTCAGACATTACAAGAAATGCTGGTATAAAACAAGACAATGATCTTGACAAGCTTTTATTAT
GCCTCAAAATATCTGATAAACAAACTGAATGGATAGAAAACTGCCAAAGACAATTTTGCAAAATGATGAA
AGCCAAACCTGATATAATCAGTGGAGAGGCCTTAATAGAATTACTTGAAAAATTTGTGCTTCATCTCACT
GAAAGCCCATCTGAATGCTACTTCCCTTCAGTGGAGTATACAGCTACTGATGCAAATGTGAAGAATGAAA
GTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGGCAAATTCCTCAGTCTCTTAAA
AGATGGTGCAGAAAATGATCTTACCTGGGTTTTAAAGCATTGTGAGAGATTCCTGAAACAGCAGCAAACT
TCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTCTGT
TCATGATAATGTTGGGAGACAAAGAAAAAACATTCCAATTTCTTCATCAATTCTCCAGGCTTCTGACTTC
TGCTTTTCTTTGGTTGCCAAGGCTACATATTTCTAGTTACCTTCCTAATGACACTGTAGAATCTGGCATC
CATCCAGTATATTTTTGCAGCACCCATTATATTGAAATGCTACTGAAGGCTGAGTTGCCTCTTGTGTTTT
CAGCTTTTCACATGTCTGGTTTTGCACCATCACAGATTTGCCTGCAATGGATAACCCAGTGTTTTTGGAA
TTACTTAGATTGGATAGAAATCTGCCATTATATTGCTACTTGTGTTTTCCTTGGTCCTGATTATCAAGTG
TATATCTGTATAGCTGTATTCAAACATTTACAGCAAGACATTCTACAGCACACTCAGACTCAAGATCTGC
AAGTTTTCCTAAAAGAAGAAGCACTGCATGGGTTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTT
GGAACAAAACTACCGAACAGTGCTGCTGAGAGACATGCGGAACATTAGACTGCAGAGCACATAG

Translation (1257 aa):
MAHFSSEDQAMLQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSM
IEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQ
KKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLDPGQPKEVRYEALQTLCSAPPSDVLNCEN
WTTLCEKLTVSLSDPDPVFSDRILKFCAQTFLLSPLHMTKEIYTSLAKYLESYFLSRENHIPTLSAGVDI
TNPNMTRLLKKVRLLNEYQKEAPSFWIRHPEKYMEEIVESTLSLLTVKHNQSHVVSQKILDPIYFFALVD
TKAVWFKKWMHAHYSRTTVLRLLETKYKSLVTTAIQQCVQYFEMCKTRKADETLGHSKHCRNKQKTFYYL
GQELQYIYFIHSLCLLGRLLIYKQGRKLFPIKLKNKKGLVSLIDLLVLFTQLIYYSPSCPKMTSAAHSEN
YSPASMVTEVLWILSDQKECAVECLYNNIVIETLLQPIHNLMKGNEASPNCSETALIHIAGILARIASVE
EGLILLLYGANMNSSEESPTGAHIIAQFSKKLLDEDISIFSGSEMLPVVKGAFISVCRHIYSTCEGLQVL
ITYNLHESIAKAWKKTSLLSERIPTPVEGSDSVSSVSQESQNIMAWEDNLLDDLLHFAATPKGLLLLQRT
GAINECVTFIFNRYAKKLQVSRHKKFGYGVLVTRVASTAAGGIALKKSGFINELITELWSNLEYGRDDVR
VTHPRTTPVDPIDRSCQKSFLALVNLLSYPAIYELVRNQDLPNKTEYSLREVPTCVIDIIDRLIILNSEA
KIRSLFNYEQSHIFGLRDFIIDGLSVERNHVLVRINLVGGPLERILPPRLLEKSDNPYPWPMFSSYPLPN
CYLSDITRNAGIKQDNDLDKLLLCLKISDKQTEWIENCQRQFCKMMKAKPDIISGEALIELLEKFVLHLT
ESPSECYFPSVEYTATDANVKNESLSSVQQLGIKMTVRYGKFLSLLKDGAENDLTWVLKHCERFLKQQQT
SIKSSLLCLQGNYAGHDWFVSSLFMIMLGDKEKTFQFLHQFSRLLTSAFLWLPRLHISSYLPNDTVESGI
HPVYFCSTHYIEMLLKAELPLVFSAFHMSGFAPSQICLQWITQCFWNYLDWIEICHYIATCVFLGPDYQV
YICIAVFKHLQQDILQHTQTQDLQVFLKEEALHGFRVSDYFEYMEILEQNYRTVLLRDMRNIRLQST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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