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Report for CCDS43511.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43511.1 Public Homo sapiens 6 ADAT2 24 110 108 CCDS HistoryNCBI Gene:134637Re-query CCDS DB by CCDS ID:43511.1Re-query CCDS DB by GeneID:134637See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43511.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000237283.9 ENSP00000237283.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000237283.9Link to Ensembl Protein Viewer:ENSP00000237283.8Re-query CCDS DB by Nucleotide ID:ENST00000237283Re-query CCDS DB by Protein ID:ENSP00000237283
Original member Current member NCBI NM_182503.3 NP_872309.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182503.3Link to Protein Sequence:NP_872309.2Re-query CCDS DB by Nucleotide ID:NM_182503Re-query CCDS DB by Protein ID:NP_872309Link to BLAST:NP_872309.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872309.2 191 Q7Z6V5-1 191 100% 0 0

Chromosomal Locations for CCDS 43511.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 143428463 143428506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143428612 143428684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143432505 143432611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143433831 143433981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143438590 143438694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143450563 143450658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (576 nt):
ATGGAGGCGAAGGCGGCACCCAAGCCAGCTGCAAGCGGCGCGTGCTCGGTGTCGGCAGAGGAGACCGAAA
AGTGGATGGAGGAGGCGATGCACATGGCCAAAGAAGCCCTCGAAAATACTGAAGTTCCTGTTGGCTGTCT
TATGGTCTACAACAATGAAGTTGTAGGGAAGGGGAGAAATGAAGTTAACCAAACCAAAAATGCTACTCGA
CATGCAGAAATGGTGGCCATCGATCAGGTCCTCGATTGGTGTCGTCAAAGTGGCAAGAGTCCCTCTGAAG
TATTTGAACACACTGTGTTGTATGTCACTGTGGAGCCGTGCATTATGTGTGCAGCTGCTCTCCGCCTGAT
GAAAATCCCGCTGGTTGTATATGGCTGTCAGAATGAACGATTTGGTGGTTGTGGCTCTGTTCTAAATATT
GCCTCTGCTGACCTACCAAACACTGGGAGACCATTTCAGTGTATCCCTGGATATCGGGCTGAGGAAGCAG
TGGAAATGTTAAAGACCTTCTACAAACAAGAAAATCCAAATGCACCAAAATCGAAAGTTCGGAAAAAGGA
ATGTCAGAAATCTTGA

Translation (191 aa):
MEAKAAPKPAASGACSVSAEETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATR
HAEMVAIDQVLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNI
ASADLPNTGRPFQCIPGYRAEEAVEMLKTFYKQENPNAPKSKVRKKECQKS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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