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Report for CCDS43776.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43776.1 Public Homo sapiens 8 GPAA1 24 110 108 CCDS HistoryNCBI Gene:8733Re-query CCDS DB by CCDS ID:43776.1Re-query CCDS DB by GeneID:8733See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43776.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355091.9 ENSP00000347206.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355091.9Link to Ensembl Protein Viewer:ENSP00000347206.4Re-query CCDS DB by Nucleotide ID:ENST00000355091Re-query CCDS DB by Protein ID:ENSP00000347206
Original member Current member NCBI NM_003801.4 NP_003792.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003801.4Link to Protein Sequence:NP_003792.1Re-query CCDS DB by Nucleotide ID:NM_003801Re-query CCDS DB by Protein ID:NP_003792Link to BLAST:NP_003792.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003792.1 621 O43292-1 621 100% 0 0

Chromosomal Locations for CCDS 43776.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 144082731 144082804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144083124 144083303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144083389 144083500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144083714 144083861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144083939 144084040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144084134 144084330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144084413 144084609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144084722 144084875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144085043 144085138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144085289 144085479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144085573 144085743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144085882 144086125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1866 nt):
ATGGGCCTCCTGTCGGACCCGGTTCGCCGGCGCGCGCTCGCCCGCCTAGTGCTGCGCCTCAACGCGCCGT
TGTGCGTGCTGAGCTACGTGGCGGGCATCGCCTGGTTCTTGGCGCTGGTTTTCCCGCCGCTGACCCAGCG
CACTTACATGTCGGAGAACGCCATGGGCTCCACCATGGTGGAGGAGCAGTTTGCGGGCGGAGACCGTGCC
CGGGCTTTTGCCCGGGACTTCGCCGCCCACCGCAAGAAGTCGGGGGCTCTGCCAGTGGCCTGGCTTGAAC
GGACGATGCGGTCAGTAGGGCTGGAGGTCTACACGCAGAGTTTCTCCCGGAAACTGCCCTTCCCAGATGA
GACCCACGAGCGCTATATGGTGTCGGGCACCAACGTGTACGGCATCCTGCGGGCCCCGCGTGCTGCCAGC
ACCGAGTCGCTTGTGCTCACCGTGCCCTGTGGCTCTGACTCTACCAACAGCCAGGCTGTGGGGCTGCTGC
TGGCACTGGCTGCCCACTTCCGGGGGCAGATTTATTGGGCCAAAGATATCGTCTTCCTGGTAACAGAACA
TGACCTTCTGGGCACTGAGGCTTGGCTTGAAGCCTACCACGATGTCAATGTCACTGGCATGCAGTCGTCT
CCCCTGCAGGGCCGAGCTGGGGCCATTCAGGCAGCCGTGGCCCTGGAGCTGAGCAGTGATGTGGTCACCA
GCCTCGATGTGGCCGTGGAGGGGCTTAACGGGCAGCTGCCCAACCTTGACCTGCTCAATCTCTTCCAGAC
CTTCTGCCAGAAAGGGGGCCTGTTGTGCACGCTTCAGGGCAAGCTGCAGCCCGAGGACTGGACATCATTG
GATGGACCGCTGCAGGGCCTGCAGACACTGCTGCTCATGGTTCTGCGGCAGGCCTCCGGCCGCCCCCACG
GCTCCCATGGCCTCTTCCTGCGCTACCGTGTGGAGGCCCTAACCCTGCGTGGCATCAATAGCTTCCGCCA
GTACAAGTATGACCTGGTGGCAGTGGGCAAGGCTTTGGAGGGCATGTTCCGCAAGCTCAACCACCTCCTG
GAGCGCCTGCACCAGTCCTTCTTCCTCTACTTGCTCCCCGGCCTCTCCCGCTTCGTCTCCATCGGCCTCT
ACATGCCCGCTGTCGGCTTCTTGCTCCTGGTCCTTGGTCTCAAGGCTCTGGAACTGTGGATGCAGCTGCA
TGAGGCTGGAATGGGCCTTGAGGAGCCCGGGGGTGCCCCTGGCCCCAGTGTACCCCTTCCCCCATCACAG
GGTGTGGGGCTGGCCTCGCTCGTGGCACCTCTGCTGATCTCACAGGCCATGGGACTGGCCCTCTATGTCC
TGCCAGTGCTGGGCCAACACGTTGCCACCCAGCACTTCCCAGTGGCAGAGGCTGAGGCTGTGGTGCTGAC
ACTGCTGGCGATTTATGCAGCTGGCCTGGCCCTGCCCCACAATACCCACCGGGTGGTAAGCACACAGGCC
CCAGACAGGGGCTGGATGGCACTGAAGCTGGTAGCCCTGATCTACCTAGCACTGCAGCTGGGCTGCATCG
CCCTCACCAACTTCTCACTGGGCTTCCTGCTGGCCACCACCATGGTGCCCACTGCTGCGCTTGCCAAGCC
TCATGGGCCCCGGACCCTCTATGCTGCCCTGCTGGTGCTGACCAGCCCGGCAGCCACGCTCCTTGGCAGC
CTGTTCCTGTGGCGGGAGCTGCAGGAGGCGCCACTGTCACTGGCCGAGGGCTGGCAGCTCTTCCTGGCAG
CGCTAGCCCAGGGTGTGCTGGAGCACCACACCTACGGCGCCCTGCTCTTCCCACTGCTGTCCCTGGGCCT
CTACCCCTGCTGGCTGCTTTTCTGGAATGTGCTCTTCTGGAAGTGA

Translation (621 aa):
MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMVEEQFAGGDRA
RAFARDFAAHRKKSGALPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTNVYGILRAPRAAS
TESLVLTVPCGSDSTNSQAVGLLLALAAHFRGQIYWAKDIVFLVTEHDLLGTEAWLEAYHDVNVTGMQSS
PLQGRAGAIQAAVALELSSDVVTSLDVAVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWTSL
DGPLQGLQTLLLMVLRQASGRPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVGKALEGMFRKLNHLL
ERLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWMQLHEAGMGLEEPGGAPGPSVPLPPSQ
GVGLASLVAPLLISQAMGLALYVLPVLGQHVATQHFPVAEAEAVVLTLLAIYAAGLALPHNTHRVVSTQA
PDRGWMALKLVALIYLALQLGCIALTNFSLGFLLATTMVPTAALAKPHGPRTLYAALLVLTSPAATLLGS
LFLWRELQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLFPLLSLGLYPCWLLFWNVLFWK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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