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Report for CCDS44157.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44157.1 Public Homo sapiens 1 DNAI4 24 110 108 CCDS HistoryNCBI Gene:79819Re-query CCDS DB by CCDS ID:44157.1Re-query CCDS DB by GeneID:79819See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44157.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371023.7 ENSP00000360062.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371023.7Link to Ensembl Protein Viewer:ENSP00000360062.3Re-query CCDS DB by Nucleotide ID:ENST00000371023Re-query CCDS DB by Protein ID:ENSP00000360062
Original member Current member NCBI NM_207014.3 NP_996897.2 Accepted alive Link to Nucleotide Sequence:NM_207014.3Link to Protein Sequence:NP_996897.2Re-query CCDS DB by Nucleotide ID:NM_207014Re-query CCDS DB by Protein ID:NP_996897Link to BLAST:NP_996897.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996897.2 545 Q5VTH9-2 545 100% 0 0

Chromosomal Locations for CCDS 44157.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 66837653 66837796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66840469 66840671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66847484 66847678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66862147 66862302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66871370 66871509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66874781 66874937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66891154 66891266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66893229 66893413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66905201 66905375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66924662 66924831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1638 nt):
ATGACGCCCGGCAAACATTCCGGAGCCTCGGCCCGAGCCGCTAACGGAGGAGCTTGGGGGTACAGGGACT
TCAGAGGCGGCCAAAAAAAGGGGTGGTGCACCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGC
AGGCAGTCACAAGCAGCAGAACTTCGGGTTGAACAATGCCACACAACCAAAGAAGTCTATTAGCTTTTTT
GCTACAATGAAAGCAACTTCAGTGAAAGGATATACTGGTGCAAATCAAAGCAGAATGGCTGTGTCCAAAA
CCGTGCTTATTCCACCTGAACTGAAAACTGTAGAAAAACCAAATCCCAATATAAAGACAACACAGGTATT
TGACATAAATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACTGGTACAGCAAAA
CCAAGTAAACTCTTGACATCACAAGAAGGATCACTTGGATCAGAATTTATATCTTCCTATAGCCTTTATC
AGAATACAATAAATCCTAGTACGTTAGGGCAGTTTACAAGGTCAGTTTTAGGAAGCAGTACAGTTTCTAA
GTCAAGTGTATCAGCAAGTGAATCAATAGCAGAAGACCTGGAAGAACCATCCTATAAACGGGAAAGATTG
ACTAGTTTCACAGATTTGCAAGTTATAAGGGCAGCACCTGAAAAAATTGTAACAAAAGAAGACCTGGAGA
AGAATATAGAGATAATACTCACAGAGACAGAAACACTGAGATTTTTTGACTTGCCCACAGTCATGGTCTC
TGTAGAATCTGAAGAAGCTGAGAAAGTAACTCAGAGAAACAAGAATTATGAAGTCCTTTGTAGAAACAGA
TTAGGCAATGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTTC
AATGTGATAAAATCATAATGGAAGATAAAGGCATAATGTCCACTGCCTGGGATTTGTATGATTCTTACAA
TGCTATGGAACTTGTATCTTTATCAGTAAAACAATCTGTGGTTGAGTCAAGTAGTAAAGCAAATGTACTT
CCTAAAGATCAGGACCAAAGATTGCCAGGGAGCACTACAGAAAAAAATAGTGAAACTAGTTCTCTAATGG
ACATAGAAAATGTAATTCTGGCAAAAATCCATGAAGATGAGGAAGACCACTCAGATGCAATATTAAAATC
TGACAAATTTCATCAGGACTTATTTTTTATGGAACGGGTTCTGATGGAAAATATATTTCAGCCCAAACTT
GCAGCTTATCGTCAGCTTCCTGTTTTAAAAGAACCTGAACCTGAAGAGCCTGAAGATGTTTTAGAAAGTG
CAAAACATGAAGAGGTAGAGGAAGAATCTAAGAAGGAGGAGGAAGAAGAAATACATGCAGAAGAATCAAC
AATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGC
CTTGCCTGGAATAAAACAAATCCAGATCTTTTGGCTGTTGGCTATGGGCACTTTGGATTTAAAGAGCAAA
AAAGAGGACTGGCTTGCTGCTGGTCAATAAAGAATCCCATGGTAACCCAAACAAGAATAAGAAGCATTTT
TATCTGGCTGTTGACAAAATTCTCATAA

Translation (545 aa):
MTPGKHSGASARAANGGAWGYRDFRGGQKKGWCTTPQLVATMPVSPAGSHKQQNFGLNNATQPKKSISFF
ATMKATSVKGYTGANQSRMAVSKTVLIPPELKTVEKPNPNIKTTQVFDINGTDVTPRPLYHPDPLTGTAK
PSKLLTSQEGSLGSEFISSYSLYQNTINPSTLGQFTRSVLGSSTVSKSSVSASESIAEDLEEPSYKRERL
TSFTDLQVIRAAPEKIVTKEDLEKNIEIILTETETLRFFDLPTVMVSVESEEAEKVTQRNKNYEVLCRNR
LGNDLYVERMMQTFNGAPKNKDVQCDKIIMEDKGIMSTAWDLYDSYNAMELVSLSVKQSVVESSSKANVL
PKDQDQRLPGSTTEKNSETSSLMDIENVILAKIHEDEEDHSDAILKSDKFHQDLFFMERVLMENIFQPKL
AAYRQLPVLKEPEPEEPEDVLESAKHEEVEEESKKEEEEEIHAEESTIPANLERLWSFSCDLTKGLNVSS
LAWNKTNPDLLAVGYGHFGFKEQKRGLACCWSIKNPMVTQTRIRSIFIWLLTKFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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